Acanthopagrus latus (yellowfin seabream): 119018029
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Entry
119018029 CDS
T08233
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119018029 (cdhr5a)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Cadherin related
119018029 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119018029
NCBI-ProteinID:
XP_036951252
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Position
4:complement(33300193..33310509)
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AA seq
708 aa
AA seq
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MELKSKSKPGNVLLGCIVAVCFCTVCGAERLCTVPPGPVTVPENNTADVQLVKISSVDDV
TLTVTVNPEDLFYLRGNALMVKKGLDYESLSTAALVVWVQCSRAGSRSVNESVEVLVENV
NDNPPNFAQNHFVLEVNELTTVNSTVGLIEATDVDSEPLYYRLESATDKYFRLESINSPK
ILVKSLLDYDVVQKISLVLHVQDTFNGSASDEPFFTSVASITVHVKDVDNRPPWFQPCLR
TNLGIAKLCVSGGYRGRVNLTEKEEGPLVLEPGPVFAKDGDKNRSELISYRILRGNEGNI
FQIDEETGNITMTKAADIVGPITLTVLASQVTNRDQFAVTQVTIEVMKKSRNPPRFERER
YEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFAAGVNPDVKYEVQYSSYVNVTSDGFV
ILKRVVKTESFALQLRAVDVTTGEFGTAALSVQVIPAVAIPSPSNVGYRPGDMALLGLVM
AALLVLCLIVIGFLISRLYKGSGSMDKICECLGPCLKSDQPRSGHRDSLQYTNDGFQNEG
DQSRGGARRLNNVVPRRSTFPQPRGRVIPLERRNRHCSSCGVYTNHVPKGSPSVRQSRRG
RGDGDEYSSRSILTRQRRKEGQKTVWFKESEDSSDIEVEIIPDTVGRVEEETEEELEGEV
EMEGVVRDPAAPLRESDGGQENQNTESGEEQDDGGSSEQKKGSEEQEG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaatcgaagagtaaacctgggaacgttctcctcggatgcatcgtcgccgtc
tgcttttgtacagtttgcggggctgaaagactgtgcacggttccgccgggcccggtgacg
gtccctgagaacaacacggcggacgtccagctggtgaagatcagctcggtggacgatgtg
actctgacggtcacagtgaaccctgaagatctgttctacctgcgaggaaacgctctgatg
gtgaagaagggactcgactacgagtctctgtccactgcagctctggtggtttgggtccag
tgcagcagagccgggtccagatctgtgaacgagtctgttgaagttctggtagaaaacgtg
aacgataacccgccgaacttcgctcagaaccacttcgtactggaagtgaacgagctcacg
acggtcaactccaccgtcggactgatcgaagccacagacgtcgactcggagccgctgtac
tatcgcttagagtccgcgacagataagtatttccgtcttgaaagcatcaacagtccaaag
atcttggtgaaaagcctgctggactacgacgtggtgcagaagatctctctggttcttcac
gtgcaggacacgttcaacggttcggcgtccgacgagcccttcttcacgtccgtggcctcc
atcacggtgcacgtgaaggacgtcgacaaccggccgccctggttccagccgtgtctgagg
accaacttgggaatcgccaaactgtgcgtgagcggcggctacagaggacgagtcaacctc
accgagaaggaggaaggtccgctggtgctggaacctggtccggtgttcgccaaggacgga
gacaagaaccggagcgagctgatcagctacagaatcctgcgaggaaacgagggaaacatt
ttccagatcgacgaggaaacaggaaacatcaccatgacgaaggccgctgacatcgtcggc
ccgataactctcacagttctggcgtcacaggtgaccaacagggatcagttcgcggtgact
caggtgaccatcgaggtgatgaagaagagcaggaaccctcctcgctttgagagggagcga
tacgaaggtttcatctacagcaactcggtcccagagagcatgatcctccgggaccggagc
accaaccggcccttcagagtccgagctcgagacgaggacttcgctgctggtgtgaatcca
gatgtgaagtacgaggttcagtacagcagctacgtcaacgtgacctcggacggcttcgtg
atcctgaagcgagtcgtgaagacggagtccttcgcgcttcagctcagagcagtcgacgtc
acgacgggagagtttggaacagctgccctctctgttcaggtcatacctgccgtggcgatc
ccgtctccctccaacgtcgggtaccgtccgggcgacatggcgctcctgggcctggtgatg
gcggctctgctggtcctctgcctcatcgtgatcggattcctgatttcccgcttgtacaag
ggaagcggcagcatggacaaaatatgtgagtgcctgggcccctgcctgaagtccgaccag
ccgcgctccggccacagggactcgctgcagtacaccaacgacggcttccagaacgagggc
gaccagagccgcgggggcgccaggcgcttgaacaacgtcgtccccagacggagcaccttc
ccccagccgcgaggccgggtcatccccctggagagacggaaccgccactgctcctcctgt
ggcgtctacaccaaccacgtccccaaggggagcccctcggtgaggcagtccaggagaggc
cgaggagacggggacgaatacagctccagatccatcctgacccggcagaggaggaaggag
ggccagaagacggtgtggttcaaggagagcgaggactcctccgacatcgaggtggagatt
atcccagacactgtaggccgggtggaggaggagactgaggaggagctggagggagaggtg
gagatggagggggtcgtcagagacccggcagccccgctgagagagtctgacggcgggcag
gagaaccagaacacagagtccggtgaggagcaggacgatggaggcagctcagaacaaaag
aagggaagcgaggagcaggagggctga
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