Acanthopagrus latus (yellowfin seabream): 119018037
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Entry
119018037 CDS
T08233
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119018037
Transcription factors [BR:
alat03000
]
Eukaryotic type
Other basic domains
RF-X
119018037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Dynein_heavy
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
119018037
NCBI-ProteinID:
XP_036951259
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All DBs
Position
4:22735189..22752503
Genome browser
AA seq
1419 aa
AA seq
DB search
MAEEDPQQQPDRGARTLPGLLPGLQGAEASALQLRIKNSICKSVQSKVENILQDVEKFSD
IEKLYLYLKLPSGPSSNTEKSDQSALSSSRTQQMHAFNWIRNHLEEYPETSLPKQEVYDE
YKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLRKRPFVHMPSLPT
LDMHKTGDGLQCDVLDTAGQLSSIQEDVRFAACDLVCEWAQKVLKRQFDDVEDLARFLID
SHYISNKSLAALTITTGTATEVNTPQSVSAFVPTAEAHSFQPHVTTLSSPSVDAKQQLQR
KIQRKQQEQKLHSPSPGEGQTKRADDGVPCASPTPPSPQTTIGIVVAAVPSPITVQRSRQ
LMSPSPMGTVENKMLPLNFQMLTQPVQAVKQSPKPPQNILTSPMGERTARQRYAQILPKP
SAATAITLRSPSTMIIGNNPIKTVMTTCHVSPVSLVKMTAISLAPTGSNTTTSSLRPASA
GISNSAVAEDVSCNQSTRSTSAVPILAPVARPVQAVNTPNIDVEMEVEAIHKNSQMQNSS
SLILTQGAMTNKAGGAVQRAASVPIPQTRGFLSLEETPSTNCSGRSCSSTHTVAATESSD
DSIDNTSTLHLTPCNQNTSAVSLLNTIRTPSCGEGSSGTSVKEGFLSTKSLRKRSSLSPD
FSPVKRVFMPQQSVEGAAGSGYGIRNTVSNIQRPGAPTRPESAPVSREVETKMNSSTQVH
ALCTSSFRASGFYSVAKTQGSMQRKNTSTVVETGTSVSHALIQQHQGHTLASVNNNPGLQ
QHSGVSDVRSSTTGSLEGVQQQTYTQSNLATESLEFFNQASSSSQLPMQTDTDYFPFDDD
VTQDSIVEELVQMEEQMKLNNMQEFGGCVTLQGQQALMPDNVTSTNQTMTAFYNAANNNA
IHTPTPTPTPTPTSEMMGGAQGLTGESPCSRITSTTPVDSALGSSRHTPVGTPLSNCSSN
VPPSPVECRNPFAFTPINSSITGFHDGSTVSSSPVKPMQRPMATHPDKTRLEWMNNSYNS
SSSGSLNKASSGMGILPSYQGLIGDNFQKPHAFAVPHARHHDSHFGRLTPISPVQQQVSS
MAKQEGFAVPAPLDNKTTNSPATTSRCRSVSPAVHQRNLNTGNLPYIPRSVVSPFNSPVM
PEMLNIFANSQTNLRVSSMAQRSHSVPLNVMMQTEVLPTPGQQCNGKNITNVLLNKLDGD
QDDTVRGLGINNLPSSYTARMNLTQVLESDPNLSYSDNQLGLMSSESTSKMQRPNYLMEN
AMNEQMILSAGDSRASGEQRGHQAQSMLLSLSSQQHQEELQQHQQLDFSHTVKDLLMDNS
LTAGNHLMEQVTELTTGGADFPCEIRMTSEISSSINDLNALDTNLLFDPNQQQGQYQNTA
AEEELANDVLFQQITSEAAHSSGLDWLENKDHPTVGLMG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggacccccagcagcagccggaccgcggggcgaggacgcttcccggcctg
ctccccgggctgcagggagctgaggccagtgcgctgcagctcaggatcaagaactccatc
tgcaaatctgttcaatcgaaagtggaaaacattctgcaagatgtggagaagttctcagac
attgaaaagctctacctctaccttaagttgccttctggtccgagcagtaacactgagaaa
agtgaccagagtgccctgtcatcgagccgcacacagcagatgcatgcgttcaactggatc
cgcaatcatttagaggaatacccagaaacctctctccccaaacaggaggtctatgatgaa
tacaagagcttctgtgacaatctgaactaccacccgctgagtgctgcagactttggcaaa
atgatgaaaaatgtcttcccgaacatgaaggcgcgtcgacttggcatgagagggaaatct
aaatattgctatagtggactaaggaagaggccctttgttcacatgccatctttaccaact
ttggatatgcataaaacaggcgacggactccagtgtgatgtcttagacacagcaggccag
ctgagcagcatacaggaggacgtgcggtttgcagcctgtgatctggtgtgcgagtgggcc
cagaaggtgctgaaacgacagtttgatgacgtggaagacttggctcgcttcctaattgac
agccattacatcagcaacaagtctttggcagcgctcactattacaactggcactgcaaca
gaggtgaacactccacagtcggtctcagcattcgtccccaccgccgaggctcactccttc
cagcctcatgtgaccaccctgtcttcaccttctgtcgatgcgaagcagcagctccagagg
aagatccagaggaaacaacaagagcagaagctgcactcaccttcacctggagagggacaa
actaagagggctgacgacggtgtgccttgtgccagccccactcctccgtctcctcagaca
accatcggcattgtggtcgcagcggtcccaagccccatcacggtacagagaagccggcag
ctgatgtcgcccagcccaatgggaacagtagagaacaaaatgctgccacttaacttccag
atgttgacacagccagttcaggcagtgaaacagagccccaaacccccacaaaatattcta
accagtcccatgggagaacgcactgctcggcaacgatatgcgcaaattctgcccaaacct
tcggctgcgactgccatcaccttgcgctcgccctccaccatgatcatcggcaacaacccc
attaagactgtgatgactacatgtcatgtcagcccagtcagcttggtgaagatgacagcc
atatcacttgcacccaccggcagcaataccaccacttcctctctgcggccggcttctgca
ggcatcagcaactccgcagttgcggaagatgtcagctgcaatcaaagcacgaggagcact
tctgcagtccccattctggccccggtggccaggccggtgcaggctgttaatacccctaac
atcgatgttgaaatggaagttgaagctatacataaaaacagccaaatgcaaaattctagt
agtctgattttgacccaaggggcaatgacaaacaaggctggaggcgccgtgcagagggct
gccagtgtgcccatacctcagacgagaggcttcctgagtctggaggaaacacccagcact
aattgcagtggaaggtcctgctcaagcactcacactgtggcagccactgaaagcagcgat
gatagcattgataatacaagcactttgcacttaactccctgcaatcagaatacaagtgct
gtttctttactcaacaccatcagaacaccttcatgtggggagggcagcagtggaacatca
gtaaaggaaggtttcctgtccactaagagcctcaggaaacgctcaagcctcagtcctgac
ttttcaccggtcaaaagggtttttatgccccagcagtcagtagagggagctgctgggtct
ggatatgggatcagaaacacggtcagcaacatccaaagaccaggagctcctaccagacct
gaaagtgcaccagtgtcgagggaggtagagacgaaaatgaactcgtccactcaagtccat
gcactctgcacctcctctttcagagccagtggtttctactctgttgccaaaacacagggc
tcaatgcaaaggaaaaatacctccactgttgtggaaactggcacctcggtcagtcacgca
ttaatacagcaacaccaggggcacacattggctagtgtgaataataaccctggcctccaa
caacactcaggcgtgagcgatgtgaggagttcaaccacggggagcctggaaggagtgcag
cagcagacctacactcagtccaacctggcgactgaatccttggaatttttcaatcaagcg
tcgtcgtcgagccagctccctatgcagacggatacagactactttccctttgacgatgac
gtgactcaggacagcattgtggaagagctggtgcagatggaggagcagatgaaactcaac
aacatgcaggagttcggaggctgtgtcacgctgcaaggccaacaggcgctgatgccagat
aatgtaacgtcaactaatcagaccatgactgctttctataatgccgcaaacaacaacgcg
atccacactccaacgccgacgcccactcctacacccacatcagaaatgatgggaggagcc
caaggtctcaccggagagagcccctgctcccgcatcacctccacaaccccagtggacagt
gcgctgggaagcagtcgtcacaccccagttggtactccactgtctaactgcagcagcaac
gtgcctcccagtccagtggagtgcagaaacccgtttgcattcacacccatcaactccagc
atcactggttttcatgacggcagcaccgtctccagcagccccgtcaagcccatgcagaga
ccgatggccacccatcccgacaagactcggctggagtggatgaacaacagctacaacagc
agcagcagtgggagcttgaacaaggcaagcagtggaatgggaatcctccccagctatcaa
ggcctcataggtgataattttcaaaagcctcatgccttcgctgtccctcatgcacgccac
cacgacagccattttggccgcttgactcctatctcgccagtgcagcagcaggtgtctagc
atggccaagcaggagggttttgctgtgcctgcccctctggataataaaaccaccaactcg
cctgctacgacttctcgatgtcgcagcgtaagccctgctgtgcatcagaggaatctgaac
acaggaaaccttccttacatccctcgatcagtagtgtcccctttcaactcacctgtgatg
cccgagatgttaaacatctttgcaaacagccagacaaatctcagggtgagcagcatggct
cagaggagccattctgtgccgctcaacgtcatgatgcaaactgaggtcctgcccacgccg
ggccaacaatgcaatggcaagaacatcaccaatgtccttctgaacaagctagatggggac
caggatgacaccgtccggggtctcggcatcaataatttaccctccagctacactgcacgc
atgaacctcacccaggtcctggagtctgaccccaacctctcctacagtgacaaccagctc
ggcctgatgtcctccgaatccaccagcaagatgcagaggccaaattacctcatggaaaat
gctatgaacgaacaaatgattctctcagcaggtgacagcagagcctctggagagcagcgt
gggcatcaggcccagtctatgctgttgtctttgagttcacagcagcatcaagaagagctg
cagcagcaccagcagttggacttcagccacactgtgaaagacctcctgatggacaacagc
cttaccgctggcaaccacctcatggaacaggtaacggagcttactacaggcggggcagat
ttcccctgtgaaatcagaatgacatcggagatctccagcagcatcaatgaccttaacgca
ttagacaccaacctgctgtttgaccccaaccagcagcaaggacaatatcaaaacactgct
gcagaggaggagctggcgaatgatgtactgtttcagcagattaccagtgaggcggcacat
tcaagtggcctcgactggctggaaaacaaagatcatccaactgttgggttgatgggttga
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integrated database retrieval system
