Acanthopagrus latus (yellowfin seabream): 119018112
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Entry
119018112 CDS
T08233
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119018112 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
alat00537
]
119018112 (gpc6a)
Proteoglycans [BR:
alat00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
119018112 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
alat00537
]
Others
119018112 (gpc6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
119018112
NCBI-ProteinID:
XP_036951398
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Position
4:complement(17569802..17823103)
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AA seq
570 aa
AA seq
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MYAMWRLQVALCTVSVLLSLSSGESKARSCSEVRQAYNVKGFSLVNVPHQEISGEHLRVC
PQGFTCCTSEMEDKLNQQSKVEFENLVEGSSHTMRTTFVARHKKFDEFFLELLDNSEKSL
NSMFTKTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVAD
RLEGPFNIEAVIDPVDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGIGRSTRGISDVF
STRFRPYAPEERPTTAAGTSLERLRVVWRTMQHSVIDIKGKLKESKRFWSNLPDDICAKG
NLTESDEEQCWNSHTKGRYFPEVVKEGLTNQLNNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAA
AGNTLACGPSLLLVMVALTLPLCVMQTQRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtcgccttatgtactgtgtcggtgctgctgtccctg
tcgtctggcgagagcaaagcgcggagctgtagcgaggtgaggcaagcttacaacgttaag
ggattcagcctcgtcaatgtgcctcatcaggagatatcaggtgagcacctgcgcgtctgt
cctcagggattcacctgctgcacatccgagatggaggacaaactcaaccagcagagcaaa
gtggagtttgagaacttggtggaggggagcagccacactatgaggacgacgttcgtcgcg
aggcataaaaagtttgatgagtttttcttggagctgctggacaattctgagaagtctctc
aacagcatgttcacaaagacgtacgggaaactgtacatgcagaactcagaggtgttccag
gacctgttcactgagctaaagcgctactacacggggggcaacgtcaacctggaggagatg
ctgaacgacttctggtccaggctgctggagcgcatgttccagttgctcaactcccagtat
cacttcacagatgactacctggagtgcgtcagtaaatacacagatcagctaaagcccttt
ggagacgtgccgaggaaactgaaggcgcaggtcaccagggccttcatcgctgcacggacg
tttgtccaggggctaatggtgggacgggaggtcgccaaccgagttgccaaggtgaatgta
gttccagcgtgtgtcagagccttgaccaagatgctgtactgtccatactgtcggggcatg
cccgggctcaaaccctgtcacaactactgtcacaacgtgatgaggggctgcctggcaaac
caggcggatctagatgctgaatggaatctcttcattgatgctatgttactggtggcagac
agactggagggacccttcaacattgaagcagtcatagacccagttgacatcaagatatcc
gaggccatcatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggccaaccaaagccgtcaggaataggaaggtcaacgcgcggcatttcagatgtgttc
agcactcgtttcagaccctacgcccctgaagagaggccgaccacagccgctggtacaagc
ctggaaagactgagggttgtgtggaggacaatgcaacacagtgtgattgacatcaaaggg
aagctgaaggagtccaagaggttctggtccaacctgccagatgacatctgtgccaagggc
aatctcaccgagtctgacgaggagcagtgctggaacagccacactaagggcagatatttc
cctgaagtggtgaaggagggtctaaccaaccagctgaacaacccagaggtggacgtggac
atcaccaggcctgacacactgatacgacagcagatcatggctctccgtgtcatgaccaac
aagctaaagaacgcctacaatggaaatgacatctacttccaggactcgagtgacgagggc
agcagttctggcagtggtagcggctgctctgacggctgcacaacagagtttgtttttgtt
ggaacagaagctcctgtgatcggagccgacagaagtgatgaacgtgcagcagcagctgcc
gcgggcaacacactagcctgcggaccctccctgctgctggtgatggtcgccctcacactc
ccgctctgtgtaatgcagactcaacggagataa
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