Acanthopagrus latus (yellowfin seabream): 119018133
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Entry
119018133 CDS
T08233
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119018133 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119018133 (vps35)
Membrane trafficking [BR:
alat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
119018133 (vps35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
119018133
NCBI-ProteinID:
XP_036951471
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Position
4:11440226..11456678
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKSKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEGSEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQVVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLEGTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIVGQEQVDAILNLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacacagcagtctccccaagacgaacaggagaagcttctagatgaagctgtg
caggctgttaaggtccagtcattccagatgaagcgatgcctggacaagagcaagctgatg
gatgctctgaagcatgcgtctaatatgctgggtgagctgaggacctccatgctttctcca
aagagctactatgagctctatatggccatctctgacgaactccactacctagaggtttat
ctgactgatgagtttgccaagggacgcaaggtggcagatctctatgagctggtccaatat
gcaggcaacataatccccagactctatctgctcatcaccgtgggtgtggtgtacgttcgc
tccttccctcagtctcgtaaggacattctgaaggacctggttgagatgtgtcgtggtgtt
cagcacccactcagaggcctcttcctcagaaactacctgctacagtgcacccgaaacata
ctgccagatgatggagagcagccagagggatcagaggaaatgaccggtgatatcaacgac
tccattgactttgtccttctgaactttgctgaaatgaacaagttatgggttcgaatgcag
catcagggtcacagccgagacagagagaagagagaaaaggagcgacaagaactcaggatc
ctggtgggaactaacctcgttcgcctcagccagctggagggtgtcaatgtggacaagtac
aaacaggttgttctttctggagtgctggagcaggttgtgaactgcagagactcgttggct
caggagtatctaatggagtgcatcattcaggttttcccagatgagttccaccttcagacc
ctgaacccattcctgcgttcctgtgctgagctccatcaacacgtcaatgtcaagaacatc
atcattgccctcattgacagacttgctctgtttgcccatcgagaagacggccctggtatt
ccagctgagatcaaactctttgacatcttctctcagcaagtggccactgtcattcaatct
cgccaggacatgccatcagaggacgtggtctctcttcaggtctctctcatcaatttggcc
atgaaatgttatcctgatcgtgtggactatgtagataaggtcctggagggcaccgtggag
atattcaacaagctcaacttggaacacatagcgacaagcagtgcagtgtcaaaggaactt
actcgactgttgaagatccctgtggatacctacaacaacatcctaacggtgctgcagctc
aagcacttcccaccgctcttcgagtactttgactacgaatcacgcaagagcatgagttgc
tacgtgctgagcaacacgctagactacaacactaccatcgtgggacaggaacaggtggac
gccatcttgaacttggtatccacactgatacaggaccagccagaccaacctgctgacgat
cctgaccccgaagattttgctgaggagcagagccttgttggtcgtttcatccatctgctc
cactctgaagatcctgatcaacagtaccttattctgaacacagcccggaaacactttggt
gcgggtggaaaccaaaggattcgttacacactccctcctctggtgttcgcagcctaccag
ctggccttcagatacaaggagaactcctcactggatgacaagtgggaaaagaagtgccag
aagatcttttccttcgctcaccagaccatcagtgcacttatcaaggctgagcttgcggag
ctgcctctgcgactcttcctgcagggggcacttgctgcaggcgagattggctttgagaac
cacgagactgtagcttatgagttcatgtcacaggccttctccctgtacgaggatgagatc
agcgactccaaagctcagttggcagccatcacactgatcattggaactttcgagcgaatg
cgatgtttcagtgaggaaaaccacgagccgctgaggactcagtgtgctctggctgcctcc
aagctgctgaaaaagcctgaccagtgcagagccgtcagtatctgcgcccatctcttttgg
tctggtcgcagcactgacaaaaatggtgaagagatccgtgatggtaagcgggtgatggaa
tgtctaaagaaagctctgaagattgccaaccagtgcatggacccatcgctgcaagtccag
cttttcattgaaatcctcaacagatatgtctgcttctatgagagggaaaacgatgcggtg
actgtccaagtattaaaccagctgatccaaaagatcagggaagatctccccaacctggag
gccagcgaggaaacggagcagatcaacaaacacttccacaacacactggagcatctccgc
ctgcagagagaatccccggagtctgagggccccgcctatgagggcctggtcctttaa
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