Acanthopagrus latus (yellowfin seabream): 119018206
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Entry
119018206 CDS
T08233
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119018206 (rfx1b)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Other basic domains
RF-X
119018206 (rfx1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Spc42p
DUF3156
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
119018206
NCBI-ProteinID:
XP_036951638
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All DBs
Position
1:23067732..23084515
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AA seq
846 aa
AA seq
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MATSGYSEDLQPQQANTVTIATPAATTPSSAKTPHFLSEIPPTSGTIASANQSAAASKTG
QDALCSQAPPIQAQSQKAVVLTTPTQHYVTPEIQKSNGQGNSPQYIIVTVTEGSVHSNDS
LSDSSPPAPGVPTQVVQPVQTTQQQRSVLQAVSQAAKRIQTGHINNLQSVHINQEVEHVY
SGQVYVDGGGDTTFTTSTIRSSTYPFSDSPLYSQTPPASSSTYYESTPSSESDITSSVTS
QPVSVATAGANSGGAAASGGGYVIQGGYVLGGVGGGGGAAAAAAGGGGQSYSSPNSRAPP
ATVQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRL
GTRGNSKYHYYGLRIKSGSPLLRLMDEQQHMAMRQQPFTQKNRLKPVQKTQGITNGTSGG
IGQQQATALCDISAQVQQYQQFLEASRPLPDFVDIDLQDRTLPDGILLEHLKAFQTLYKE
HCEAILDVMVNLQFTLVETLWKSFWRFSQSIDTESLNLHNESEKRLPKSCLVVLCKFEPV
LQWTRECDNLLYQTLVEMLIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRI
KVVCVGSFSQTLRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFTNVQEQASWVCQC
EDRVVQRLEQDFKMTLQQQNSLEQWATWLDGVVSQALKPYEQNPVALPKAAKVFLLNWSF
YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGVTPIAVMGEFASTTKS
RISPDPEKEEEEDDEEEESDDETGDLVLQSSSLSAVDMKEPMEPPAKQPRTSLNLHTLTE
THSTPP
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctggatactcggaggaccttcagcctcagcaggccaacacggtaaccata
gcaacacctgctgccaccacaccctcatcggcaaagacgccacacttcctgtctgagatc
ccaccaacctctggaaccattgcgtcggcaaaccaatcagctgctgcctcaaaaacagga
caggatgcactttgttctcaggcaccgcccatccaggcccagagtcagaaggctgtggtt
ctgaccactcccacacagcactatgtaactcctgaaatccagaagagtaatggtcagggc
aactcgcctcagtacatcatagtgactgttacagagggctccgttcactccaatgacagc
ctgtccgactccagcccacctgcccctggtgttccaactcaggttgtccagccagtgcag
accacccagcagcagaggtcagtgttgcaagcggtgtcgcaggcggccaagaggattcag
actggccacatcaacaacctgcagtctgtgcacatcaaccaggaggtggagcatgtgtac
tctggccaggtgtacgtggatggaggaggagacacaacatttactacatccacaatccga
tcaagcacctaccctttctcggactcgcccctctactcccagacccctcctgcctcctcc
tcaacctactatgagtccacgcccagctctgagtcagacatcaccagctctgtgacctcg
cagccagtctctgtggcaacagcaggagccaatagcgggggagcggctgcgagcggaggg
ggctatgtcattcagggaggttatgtgttaggaggagtaggagggggaggaggagcggca
gccgcagcagcaggtggaggagggcagagttactccagccctaactctcgtgccccccct
gctactgtgcagtggctgtgtgataactacgagggggcggagggggtgagcttacctcgc
tgcaccctctactaccactacctgctgcactgccaggagcagaaactagaacctgttaat
gctgcatcctttggcaaactcatcaggtctgtcttcatggggctacgtacacggagattg
gggaccagagggaactctaagtaccactactatggtctgaggatcaaatctggttcccct
ctgctcagactgatggatgaacaacagcacatggcgatgaggcagcagcctttcacgcag
aaaaacaggctaaagccagttcagaaaacacaggggatcaccaatggcacatcaggtggg
atagggcagcagcaggcgacggcgctctgtgatatttcggcacaggtgcagcagtatcag
cagtttctggaggcatcaaggccactgcctgactttgtggacattgatctccaagatcga
actctgcccgatgggatccttttagaacacctcaaggcctttcagactctctacaaagaa
cactgtgaggccattttggacgtcatggtcaaccttcagttcactcttgtggagacgctg
tggaaatccttctggaggttcagccagagcattgacacagaatcacttaacctgcacaat
gagtcagagaagcgtctgcccaaatcgtgtctggtggtgctatgcaagttcgagccggtg
ctgcagtggacgagagagtgcgacaacctgctctaccaaactctggtggagatgctcatc
cctgatgtactgagacccatccctagtgccttaactcaggccatccgtaactttgccaaa
agtctggagaactggttgacaggtgccatgatgaacatcccagaagagatggtccgtata
aaggtggtgtgtgtgggctccttctcccagacgctgcgccgctacaccagcctgaaccac
ctggcccaagctgctcgagccgtcctccagaactcagcccagatcaaccagatgctctca
gacctcaaccgggtggatttcactaatgtacaggagcaggcatcctgggtgtgtcagtgt
gaagaccgtgtggtgcagcggctggagcaagactttaaaatgactctgcagcagcaaaac
tcgctggagcagtgggctacatggctggatggtgtcgtctctcaggcacttaagccctat
gagcaaaaccctgtcgccctcccaaaggctgccaaggtcttcctgctcaactggtccttc
tatagttctatggtaatccgtgacctgactctgcgcagtgctgccagttttggctccttt
cacctgatccgcttgctgtatgatgagtacatgtactacctgatcgaacacagagtggcc
caggctaaaggagtgacacccattgcagtcatgggagagtttgctagcacaaccaagagc
cgaatctcaccggacccagagaaagaagaagaagaggacgatgaggaagaggagagcgac
gacgagactggagatttggtgctgcagtccagctctctgagcgcggtcgacatgaaagag
ccgatggagccacctgccaagcagcccaggacgagtttaaatctgcacactctgactgag
acccacagcacaccaccttag
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