Acanthopagrus latus (yellowfin seabream): 119018216
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Entry
119018216 CDS
T08233
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119018216 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119018216 (efl1)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
Pre-60S particles
GTPases
119018216 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
ARM_LRRK2
Motif
Other DBs
NCBI-GeneID:
119018216
NCBI-ProteinID:
XP_036951625
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Position
4:8636023..8750789
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AA seq
1135 aa
AA seq
DB search
MGLTSLDKIIALQRSPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLQYRHGDQDYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQAVLRQAWLENIRPCLVINKIDRLIVELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEERAEKEKGEEEEEKESETLNGDQVYDWSAGLEKTDDSHLYFSPDQGNVVFASA
IDGWGFSIQQFAHIYSQRMGIKADVLLKTLWGDFYLNAKAKKIMKGAQAKGKKQLFVQLV
LDNIWSLYDAVVTRRDKEKVEKVVTSLGLKVMARDSRHSDPKVLLSAICSQWLPISHAVL
SMACEKLPSPLDMSAERVEKLMSVGARQFDTLPEQTQELKKAFLQCSSKENAPAIIFVSK
MFNVDTKALPQNRQRPLTQEEIAQRRELARQRHAERLTADQKAAESHEDLTQSGSAPQEA
QPAGHSTAKMEIRTLKDSKPEEEEEHKETFIAFARVYSGVVKRGQRVFVLGPKYDPAQGL
SMLPEGPSASQCVPEVPHLSCCSLESLYLLMGRELEDLEEVPAGNVLGIGGLEEYILKSA
TLSTSPACPPFTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGE
HVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVVRPPKVDMVNEDLGKQQKVA
IIHQVKEQASQGRSSDTLHVDPSGLVTLTTPNRLATVSVRAIPLPKEATDLLESSTELIR
TLEQLNMSLREGKSLDVSLRTLEAIAGLKAQLECLLPGRKWRNAVEQIWSFGPRRYGPNI
LLNNVEGYQRPSLWQCLATVHKAGESGAQTTAIRDFDNSIVSGFQLATLSGPMCEEPLMG
VCFSVERWDIQSSALSQHQDSLEEDSISNETSVDSNMERSTKISPPMEGMAAGLSQAKPR
PEAASTDCYGPVSGQLIAAMKEACRHAFLVQPQRLMAAMYTCEIMATAEVLGRVYGVIGK
REGRVLHEEMKEGTEMFIIKAILPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPY
WVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaccagccttgataagattattgccctgcagaggagccctgccaacatcaga
aacctgtgcatcctggcccatgttgatcatggtaaaactactctggctgattgcttagtg
gcaagtaatggtatcatatcaagtcgactggctgggaagctgaggtacctggacagccga
gaggatgaacagatcagagggatcacaatgaagtccagtgccatctctctgcagtacaga
cacggagatcaagactatttactaaacctgattgattctcctggtcatgtcgacttctcg
tctgaagtttccactgctgtcagactgtgtgatggtgccattgtagttgttgatgctgtg
gagggagtgtgtccacagacccaagctgtgctccgtcaggcgtggctggagaacatcagg
ccttgtctggtcatcaataagatagaccgactcattgtggagctaaagctcacctctcag
gaagcttacacccacctgcagaagatcctggagcaggtgaatgcagtgacagggagtttg
ttcacatccaaagtgctggaggagcgagcggagaaggagaagggggaggaggaggaggag
aaagaaagtgaaacattgaatggagatcaggtttacgactggagcgccgggctggagaaa
actgacgactcccatctctacttttctcctgaccaaggaaatgtggtctttgccagcgcc
atagatgggtggggtttcagcatccaacagtttgcacacatctacagccagagaatgggt
attaaggcagacgtgctgctcaaaactctgtggggagatttctacctcaatgcaaaagca
aagaagatcatgaaaggagctcaggccaaaggaaagaagcaactgtttgtgcagcttgtg
ttggataacatctggagtttatatgatgcagttgtcactagaagagacaaggagaaggtg
gagaaggtggtgacatccctggggctaaaggtgatggccagagactctcgtcactccgac
cctaaagtcctcctttctgcaatatgcagccagtggttacctatatcccatgctgtcctc
tcaatggcgtgtgagaagcttcccagtccgttagacatgtcggcagagagggtggagaaa
ctgatgagtgttggagcgcgacagtttgatacattgcctgaacagactcaggagcttaaa
aaagcgttcctccagtgttcaagcaaggagaatgctccagccatcatctttgtgtcgaag
atgtttaatgtggacaccaaggccctgcctcaaaacagacagaggcctttgacccaagaa
gaaattgcccagcgcagggagctggctagacaaagacatgctgagaggttgacagctgat
cagaaggcagcagagagccatgaagacctcacccagtcagggagtgctccacaggaagcc
caacctgcaggacacagtacagctaagatggagattcggacattgaaagactcaaagcca
gaagaggaggaggagcataaggagaccttcattgcatttgcgagggtctacagcggggtg
gtaaagagaggacagagggtatttgtactgggaccaaagtatgaccccgcccagggcctg
agcatgctgccagagggtcccagtgcctcacagtgtgtgcctgaggtgccacatctatcc
tgctgttccttggaaagcctgtacctgctgatgggcagagagctagaggacctggaggag
gtgcctgcaggaaatgtcctgggtattggaggcctggaggagtacatcttgaagtcggca
accctgtcaacatcccctgcctgcccgcccttcaccccgctcaactttgaggccacgccc
atcgtacgggttgccatagaacctaaacatccaagtgagatgccaaagctggtgcgtggg
atgcgtctgttgaatcaggcagatccctgtgctgaagttctgatccaggaaaccggagaa
catgtcctggtcacggctggagaagttcaccttcagcgctgcctggacgacctccgagaa
aggtttgctaaaattgagatcagcgcatccaagcccatcattccatttagagaaacagtt
gtacgccctccaaaagtggacatggtgaatgaagacctgggcaagcagcagaaagtagct
atcattcaccaggtgaaagaacaggcctctcagggccgttcatctgacactctacatgtg
gacccaagtggtctggtcaccctcaccactcccaacagattggccactgtgagtgtccgg
gcgatcccgctaccaaaggaagcgaccgatctgttggagagtagcacagagctgatacgg
actctggagcagcttaacatgtctttgagggagggtaagagtctggacgtcagccttcgg
accctggaggctatcgctggactcaaggcccagctggaatgcttgttgcctgggaggaag
tggagaaacgctgtggagcaaatctggtcctttgggcctcgaagatatggtcccaacatt
ttgctgaataatgttgagggctaccagcggccctcgctgtggcagtgtctggctacggta
cacaaagctggtgagtctggagctcagaccactgctatacgggactttgataacagcatt
gtcagtggcttccagctggcaactctgtcagggcccatgtgtgaggagcccctgatggga
gtttgcttttctgtggagaggtgggatattcagtcctcagccttgtcacaacatcaggac
tccttggaggaagactccatatccaatgagacttcagtagacagcaacatggaaagaagc
acaaagatatctccaccgatggaaggaatggcagcaggtctgagccaggccaaacccagg
ccagaggctgcatctacagactgctatgggccagtctcaggccagctgatcgctgccatg
aaggaggcctgccgtcacgctttcctggttcagccccagagactcatggctgccatgtat
acctgcgaaatcatggccaccgctgaggtcctcggccgagtatatggtgtaattgggaag
cgagagggtcgcgtcctccatgaagagatgaaggaagggacagagatgttcattatcaag
gccattctgcctgtggctgagagctttggatttgctgacgagatccgcaagaggaccagt
ggattggccagtccacagttggtcttcagccactgggaggtgatcagcagtgatccatac
tgggttcccaccactgaagaagaatacctgcacttcggggagaaagctgactccgccaac
caggctctcaaatacatgaatgctgtccgccgccgcaaaggtctttatgtggaggagaag
attgtggagcatgcagagaagcaaagaacactcagcaagaacaagtag
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