Acanthopagrus latus (yellowfin seabream): 119018320
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Entry
119018320 CDS
T08233
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119018320 (lrp4)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119018320 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
Motif
Other DBs
NCBI-GeneID:
119018320
NCBI-ProteinID:
XP_036951779
LinkDB
All DBs
Position
4:13264299..13378183
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AA seq
1916 aa
AA seq
DB search
MQPAAVLWGSLVTLLLSQTPGVQGSAECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDC
GDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHC
QNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGS
DEENCPSDVMAATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFM
CSSGMCINAGWRCDGEYDCDDQSDEKNCTTSMCTAEQFRCGTGRCVRLSWRCDGEDDCSD
HSDEEGCEKTESPPCAPDQFQCGNGRCIGQRKVCNEVNDCGDGTDEHPHHDCRPRSSEGN
CNQNNGGCSQKCQMVRGLVQCTCHTGYRLMDDGKACQDVDECAEEGYCSQGCTNTEGGFQ
CWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHH
SLELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEV
ANLDGTHRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADTHL
FWPNGLTIDYAGRRMYWVDAKHHVIERADLDGRNRKAVISHGLPHPFAITVFEDSLYWTD
WHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCLPS
NKTFTCACPTGFKKVDHFNCADGLDKFLLFARRTDIRRVSFDTEDMSDDVIPLADVRNAV
ALDWDAKDGYIYWTDVTTDSINRALWSGAKQEVVVDTSLESPAGLAIDWVTSKLYWTDAG
TDRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGFMYWTDWGANPKIERAGMDASSRIV
IISSNLTWPNGLAIDYETKRLYWADAGMKTIEFGNFDGSDRQVLIGSQLPHPFGLTVHED
KLYWTDWQSKSIQSADKLTGLGRQTLAENLENLMDIHMFHRLRETVHNPCLMNNGGCSHL
CLLAPAPKASSCACPTGINLQTDGKTCTPGMSSFLVFARRTDIRMVSLDIPYFADVVLAV
NSSMKNTIAIGVDPKEGKVYWSDSTLKKISRANIDGKAHEDIISTGLMTTDGLAVDAVGR
KIYWTDTGTNRIEVANLDGSMRKVLVWQNLDSPRAIALYHEMGYLYWTDWGEHAKLERSS
MDGSDRVVLISNNLGWPNGLAIDMAGSQLLWADAHTERIECADLNGQNRRTLVTPVQHPY
GLTLLGSHIYWTDWQSRSIQRADKNTGTNTITVRANLPGLMDIQAVDRERPLGFNKCGRR
NGGCTHLCLPRPNGTSCACPTGILLKGDARSCDDSPESYLLFSNRVSVRRISLDTNDHTD
VHVAVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSGMETVISQGLKTTDGLAVD
WVARNMYWTDTGRNTIEVARLDGTSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKI
ERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQILVSPV
SHPFALTQLKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLANVEGL
MDIIVVSPHRQTGTNLCGVNNGGCTHLCFAKTNSFVCACPDEPDRRPCSTISGYIPTAPT
RGTSSTPVPNKIPKAPTDTPHRGPVNCTDKNVNEQGCLSSVVTAPHGEGLHISYVIGGVL
TILAILILIAALIIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIEASQKPPIYNQLRY
KKEGGVDGGYTKEKIRIVEGVCLLSNEELYWDDLKQIKPSRGGLHTCMRTDTVSLQASSA
SLDDGETEQLLQEEASECSSITTLTPSAITPQRHAQHSLPDTGWASTRKPSTESEV
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggccgcggtgctgtggggctccctggtaactttgctgctcagccagactcca
ggagttcagggcagcgctgagtgttcgtgtgggaggaaccacttcacatgtgcggtcagt
gcgtttggggagtgtacctgcatcccggcccagtggcagtgtgacggagataacgactgc
ggggaccacagcgacgaggacggatgcatgcttcccacctgctcgccgctagacttccac
tgcgacaacggcaaatgtatccgtcgctcctgggtgtgtgacggagacaacgactgcgag
gacgactcagacgagcaggactgccctcccagggagtgcgaggaggatgagtttcactgc
caaaatggctactgtattcgcagcctctggcactgtgacggagacaacgattgcggcgac
aacagtgatgaacagtgtgacatgcgcaaatgttcggacaaggagttccgctgcactgat
ggcagttgcattgctgagcactggtactgtgacggagacacggactgcaaggacggatca
gatgaggaaaactgtccctcagatgtgatggcagccacctgcagcgtggaggagttccag
tgtgcatacggccgctgtatcctggacatctaccactgtgacggagacgacgactgtggg
gactggtcagacgagtcggactgctcttcccaccagccgtgcagatcagttgaattcatg
tgcagcagcgggatgtgcatcaacgccggctggagatgtgacggcgaatatgactgtgac
gaccaatcagacgagaagaactgcaccacgtccatgtgcacggccgaacagttccgctgt
ggaaccggacgctgcgtccggttgtcatggagatgtgatggtgaggacgactgctccgac
cacagcgatgaagagggctgtgagaaaactgagagtcctccatgtgctcctgatcagttc
caatgtgggaatggccgctgtattggtcagaggaaggtgtgtaacgaggtcaacgactgc
ggagatgggactgacgaacacccacaccatgactgccgtccgcgctccagcgagggcaac
tgtaaccagaataacggaggctgctcccagaagtgtcagatggtcagaggactggtccag
tgcacctgtcacactggatacagactgatggacgacggcaaagcctgccaagatgtggac
gagtgtgctgaagaaggctactgcagccagggctgtaccaacacggagggggggttccag
tgctggtgcgttcagggctatgagctccgacctgacaagcgcagctgcaaagctctaggt
ccagagccggtgctgctgtttgccaaccgtatcgacatccgtcaggttttaccgcatcgc
tccgaatacaccctgctgctcaacaacctggaaaatgccatcgccctggacttccaccac
agcctcgagttagtcttctggtcagatgtgacgctggaccgcatcatgaaggccaacctg
aacggctccaatgtggaggaggttgtgtccaccggtctggagagcccaggtggactggcc
atagactggatccatgacaaattgtactggacggactcagggacatctcgtatcgaggtg
gcgaacctggacgggacgcatcgcaaggtgctgctgtggcagaacatggagaagccccga
gccattgcactgcaccccatagagggtaagatctactggacagactggggcaatacacct
cgcatcgagtatgccaacatggacggctccaacaggcgggtcatcgcggacacacacctg
ttctggcccaacggcctcaccatcgattacgccggtcgcagaatgtactgggtggatgcc
aagcaccacgtcatcgagagggccgacctggatgggcgcaaccgcaaggccgtcatcagc
cacggcctgccacacccatttgccatcacagtttttgaggacagcctctactggaccgac
tggcacaccaagagcatcaacagtgctaataaattcaccggcaagaaccaggagattatc
cgcaacaagctgcacttccccatggacatccacaccctgcacccccagaggcagcctgca
ggtggcaggaaccgctgtggcaccaacaacggaggctgcagccacctgtgtcttcccagc
aacaagacgttcacctgtgcctgtcccaccggcttcaagaaggtggaccacttcaactgt
gctgacggtcttgacaagttcctgctttttgcccgaaggacggacatccgacgagtcagc
ttcgacacagaggacatgtccgatgatgtcatccctctggctgacgtgcgcaatgccgtg
gcgctggactgggatgccaaagacggctacatctactggacagatgtcaccaccgactcc
atcaacagagcgctgtggagcggcgccaagcaggaggtggtggtggacaccagtttggaa
agcccagcaggtttggcgattgactgggtgaccagcaagctctactggaccgatgctggt
acggatcgtatcgaagtttctaatgcagatggcagcatgaggactgtcctaatatgggag
aacctggaccggcccagggacattgttgttgacccgatcggaggtttcatgtactggacc
gactggggtgccaacccaaagattgagcgagcaggaatggacgcctccagtcgtattgtc
atcatctcatccaatctgacgtggccaaatgggctcgccattgactacgagaccaaacgc
ctttactgggccgatgctggcatgaagaccattgaatttggcaactttgatggttctgac
cgacaggttttaattggcagccagctacctcacccctttggcttgaccgtacacgaggac
aagctgtactggacagactggcagtcaaagagcatccagagtgctgacaagctcaccggc
ctgggccgacaaacactggctgaaaacctggagaatctcatggacattcacatgttccac
cgactacgtgagacggtgcataacccgtgtttgatgaataatggaggctgcagccacctg
tgtctcctggctcctgctcccaaagcctccagctgtgcctgtcccaccgggatcaacctg
cagactgatggaaagacctgcacgcctgggatgagcagcttcctggtctttgcacggagg
acagacatcaggatggtttctttggatatcccctattttgctgatgtcgttctggccgtc
aatagctcaatgaaaaacaccattgccatcggggtcgaccccaaagaaggaaaagtctat
tggtctgacagcacgctgaagaaaatcagcagagccaacatcgacggaaaagcacatgaa
gacatcatatctacaggcttgatgacaactgatggcctggcggtggatgccgttggcagg
aagatctactggacagacaccgggaccaaccgcattgaggttgccaacctggacggctcc
atgaggaaagtcctcgtctggcaaaacctggacagccctcgggccatcgccctctaccac
gagatgggttatttatactggacggactggggagagcatgctaagctggagcgctcatcg
atggatggatcagatcgtgtggtcctcatcagcaacaacctgggatggcccaacggcctg
gccatagacatggctggctcacagttactgtgggccgatgctcatactgagcgtatcgag
tgcgccgatctaaatggacagaatcgtcgcacccttgtgactccggtccagcacccgtat
ggtttaaccctgctggggtcccacatctactggaccgactggcagagccgcagcatccag
cgagctgacaagaacactgggaccaacaccatcacggtacgagccaacctgccaggccta
atggacatccaagctgtggacagggagaggccactgggttttaataagtgtggcaggagg
aatggaggctgcactcacctgtgcctgcctcgtcccaacggtacatcctgcgcctgtccc
actggcatcctgctcaagggagacgccaggtcatgtgacgactccccagagtcgtacctg
ctcttctccaaccgtgtcagtgttcgcagaatctccctggacaccaacgaccacaccgac
gtgcatgtggctgtgcccgagctgcataacgtcatctcactggattatgacagcgtggac
ggaaaactttactacactgatgtcaccctggatgtcataaggcgtgccaacctggacggc
agtggcatggagacggtgatcagccagggcctgaagaccacagatgggctggctgtcgac
tgggtggccaggaacatgtactggacggacaccgggcgcaacaccattgaggtggcccgc
ctggatggaacgagtcgcaaagtcctcgtcaataacagtttggatgaaccacgagccatc
gcagtgttcccgagcaaagggttcctgttctggaccgactggggtcacattgcaaagatt
gagcgatctcacctggacggctcggaccgaaaggttctgatcaacaccgacctgggctgg
cccaacggcctcaccttagactacgatacacgaaggatcttctgggtggacgcccacttg
gacagaattgagagctcagatctgaacgggaaactgcgtcagatcctcgtcagccccgtg
tcccacccgttcgccctcacacagttgaagccggtgtcctcccctctaacccctttctcc
cgactctcgcagcaagaccgctggatctactggacggactggcagactaagtccattcag
cgggtggacaaacacaccggccgtaacaaggaaactgtgctggccaacgtggagggcctc
atggacattatagtggtatcccctcacagacagacgggtaccaacctctgtggggtaaat
aatggtggctgcactcacctctgcttcgccaagaccaacagcttcgtgtgcgcctgccca
gatgaaccagacaggcgaccctgctccaccatttcaggttacatccccactgctcctaca
agaggaaccagcagcactccagtccccaacaagatccccaaagctccaacagacactcca
cacagaggaccggtcaactgcactgacaagaacgtaaacgagcaaggctgcttgagcagc
gtggtgacggctcctcatggagaaggacttcatatcagctatgtgattggtggagtcctg
accatcctggcaattctgatcctcatcgctgcgttgattatttacagacataagaagtca
aagtttgccgacccaggagtgagcaacctgacctacagtaacccctcgtatcggacgtcc
acacaagaggtcaagatcgaggcgtcgcagaagcctccaatatacaaccagctccgatat
aagaaagagggtggagtggacggaggctacaccaaggagaagatccgcattgtggagggt
gtgtgtcttctgtccaatgaggagctttactgggacgacctaaaacagatcaagccgtct
cgaggcggactgcacacctgcatgcgtacagacaccgtgtccctgcaggccagcagtgct
tcactagatgacggtgaaacggagcagctcctccaggaggaggcgtccgaatgctcctct
ataaccaccctgaccccttcagccatcaccccgcagcgtcacgcccagcacagcctgccc
gacaccggctgggcctccacgcgcaagccctccaccgagagcgaagtgtga
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