Acanthopagrus latus (yellowfin seabream): 119018457
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Entry
119018457 CDS
T08233
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119018457
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
alat04031
]
119018457
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
119018457
GTP-binding proteins [BR:
alat04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
119018457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119018457
NCBI-ProteinID:
XP_036952035
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All DBs
Position
1:23924954..23930276
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AA seq
292 aa
AA seq
DB search
MRGMMGTQSSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSVESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNSWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYADKNSMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVANSAASGGGSGASKANSLKRSKSFRPPQSPPKNSSASSKGNCKIS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatggggacccagagtagtcctgtcaagagttacgattatcttttaaaa
ttccttttggtgggagacagcgatgtcggaaagggagaaatcttggacagtttgcaggac
ggatcggtagaatctccatatgcctacagcagtgggattgattacaagaccaccacaatt
ctgctggatgggagacgggtgaaattagaattatgggacacatcagggcaaggcagattc
tgcaccatcttcaggtcttactctcgtggagcacagggcatcttgctagtgtatgacatc
accaacagctggtcgtttgacggcatcgaccgctggatccgggaaatcgacgagcatgcc
ccaggtgtacccaggattctggtgggcaaccgacttcacctggctttcaagcggcaggtg
cccacggagcaggcgagggcttacgcggacaagaacagcatgactttctttgaggtcagc
ccgctgtgcaacttcaacgtcatcgaatccttcactgaactttcgcgcattgtgctgatg
aggcacgggatggagaaattctggaggcccaaccgagtcttcagcctccaagatctgtgc
tgccgatcgattgtctcctgcacaccggtgcacctcatcgacaaactgcccctccccgtg
gccatcaagtctcacctcaagtctttctcgatggccaacggcatgaacgcagtcatgatg
cacggacgctcgtactcggtggccaacagcgcggcatcaggcggaggcagcggcgccagc
aaagccaacagtctcaagcgctcaaagtccttcaggcctccgcagagccctccaaagaac
tcgtcggcatcctctaaggggaactgtaagatctcatag
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