Acanthopagrus latus (yellowfin seabream): 119018511
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Entry
119018511 CDS
T08233
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119018511 (igdcc4)
Cell adhesion molecules [BR:
alat04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119018511 (igdcc4)
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Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Adeno_E3_CR2
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
119018511
NCBI-ProteinID:
XP_036952134
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All DBs
Position
4:complement(29023999..29082329)
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AA seq
1260 aa
AA seq
DB search
MAVESTIWLFCLLSLFCGPSKQEKPVSVELSCGAGPSYVVLEPGLPLLLDCNLGASDAPF
NVTWLQDGQPLPLDGADFLQYLANGSLLLLPSSKDGHLPQGVEGGYSCVSASALGALTSR
TVNVLLASLSKFHQEPSPQTVPAGGAARFECQIEGVPTPVITWEKDKVAVPEEPRFISLP
NGVLQLLEVTREDEGAYRCVASNSARKDMSHEARLAVTTGSTETLNRVVIVAPPQNATVV
LGRPAVMECMAQGQPKPLVSWSRQDGKPISTDVVVLATNLVIRDTRRHHAGVYVCRANKP
KTREFVIAAAELHVPAPPVILQPPETASLSRGNTARFVCNSSGEPPPVLHWLKNGKPIKP
FRRVKSQTPGVLLINQLALEDAGYYQCIADNGLGTACATAKLTVIVREGLPSPPRHLSAT
PYSSTTALLTWEKPEYNSDQIIGYSVHCQRAAGSDNVEYQFAMNNDTTEYHVKELLPHTA
YTFFVVAYSPMGASRPSLPVTVEMLEDVPSAPPQLSIASTSPTDIRLMWHPLSSQHSRGA
VTRYRIEYSTLDQVDSVFSVEVGGNETQFTLRELQPNQAYRLRITAGTGVGFGVPSEWAQ
HQTLAQYNHSEHSLVIFAPNELKVRARLNTLNVTWHPSPNHTLVSGYKLSCREVEADKLV
SGGRPSQTHTIRLRKKARYHLLTGLAPDRQYEVRVWAFNKQTDGAAAVWKGRTDKLHNAT
PTPPPPPRPPPLPPSSIQAMANTSTSIWLRWEKPRFSNVRIINYTVRCSPAGTTNASLVS
YHTSSAQEILLGALKPFTRYELAVQSNGVDVVGPFSGTVEESTLSDRPSTPPEELQLSAL
DSSSVLVSWRPPLEPNGIIISYRILYSGNLSQPEHLWGNLSQDGSITSVEVQGLFGGTRY
FFKMGASTEVGPGPFSPIKDVHTPLPKYELDIHAVTGIIVGVCLGLICILLCMCFSFRNG
KSREVSGGLDPTAVTPQYRRGGSPASTNVPECSDSHELETLMPPGNQESGQPLEEASEEQ
SLMASANPREGEDAPAPEPKAAWNGSVSHDWANRITRYRDTITEDSPTLINGALNTLITD
NSTDSSDRLCTSVCSNQVEAEVIVHSELTEPRREKEEEGSKREMDSNTPRGPSLSEDRYS
PLSEPCPPGEDDTLEKLSLAQSPLSLPSLKLVANHNGELEGMGDQPNADSEPQQDIGLTN
GFHSPKTVRTVLRSEHLENGDSRHCPSAPGKAISAGLSPAPFVSSGLVHSTSAAHSYLCP
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagagtacaatttggctgttctgtcttctttcgctgttttgtggtccatcc
aagcaagaaaagcctgtttcggtggagctgagctgcggggccggacccagctatgtagtg
ttggagccaggtttgcccctcttgctggactgcaacctcggggccagcgatgcacctttc
aatgtcacctggcttcaggatggccagcctctgcctctggacggagctgacttcctgcag
tacttggccaacgggtccctcctcctgctgcccagctcgaaggacggacaccttcctcag
ggtgtggagggaggctacagctgtgtgagcgccagcgccctgggagcgctgactagccgg
actgtaaatgttctcctagcaagtctgtctaaattccatcaggagccgtcaccccagaca
gtgccggccgggggagctgcccgcttcgagtgccaaattgagggagtgcccacacctgtt
attacctgggagaaggacaaagtggctgttcctgaagagccaaggttcatttcccttcct
aacggggtgctgcagcttctggaggtgaccagggaggatgagggcgcctaccgctgtgtc
gcatccaactctgccagaaaagacatgagtcacgaagccaggctcgctgtcaccacaggc
tctacagagaccctgaacagggttgtgattgttgcgccgcctcagaatgcaacagtcgtg
ctcggccgccccgctgtgatggagtgtatggcacaaggccagccgaagccgctggtgtcc
tggagcaggcaagatggaaagccgatctccactgatgtggttgtccttgcaacaaacctg
gtgattagggacacgaggcgtcaccatgccggcgtctacgtctgccgggcgaacaagccc
aagaccagagagtttgtgatcgctgctgctgagctgcatgtgcctgcacctccagtgatc
ctccagcccccagagaccgcatccctctcccggggcaacacagctaggtttgtgtgcaac
agctccggggagcctcctccggtgttgcactggctgaagaacggcaagcccatcaagccc
ttcagacgcgtgaagagccaaacccctggagtcctgctcatcaaccagctagcactggag
gacgcgggctactaccagtgcatagctgacaatgggctgggcacggcatgcgccaccgcc
aagctgacggtgatcgtgagggagggtctgcccagccctcctcgccacctgtctgccaca
ccctactccagcacaactgccctgctcacctgggagaaacctgagtacaactctgaccag
atcatcggctactctgtgcactgccagcgtgccgcaggctcagataacgtggagtaccag
tttgcgatgaacaacgacaccaccgagtaccacgtcaaagaacttctcccacatactgcc
tacacattcttcgtggtggcttactctccgatgggcgccagtcgcccgtccctgcctgtt
actgtagagatgctggaggacgtgccgagtgcacctcctcagctgtcgatagccagcacc
tcccccacagacatcaggctgatgtggcatccattgtcctcgcagcacagtcgaggagct
gtcacacgctaccgcatagaatacagcaccttggatcaggtggacagtgtattctcagtt
gaagttgggggtaatgagactcaattcacactaagagagctgcagccaaaccaagcctac
cgactgaggatcacagctggaacaggcgtcggcttcggggttccctctgaatgggcccag
caccagacattagcccagtacaaccacagtgagcacagcctggtgatctttgccccgaat
gagctgaaagtcagagccaggctgaacacactgaacgtgacatggcatccctcacccaat
cacacgctggtctctggctacaagctgtcctgtcgagaggtggaagcagacaaattggtg
agtggagggaggccatcgcagacccacaccatcaggctccggaagaaggccaggtatcat
ctcctcaccggcctggcccccgaccggcagtatgaggtcagggtttgggccttcaacaag
cagacagacggagcagctgctgtctggaaggggaggacagacaagcttcacaatgcaaca
cccacaccacccccaccaccgcgcccccctccattgcccccaagcagcatccaagccatg
gccaacacttccacctccatctggctgcgctgggagaaaccgaggttcagcaacgtacgg
atcatcaactacacggtgcgctgcagcccggccggcaccaccaacgcctccttggtgtcc
tatcacaccagctctgctcaggagatactgctcggggcgctgaagcccttcacccgctac
gagctggccgtgcagtctaatggagtggatgtggtgggacctttcagcggcacagtggag
gagtcgactctgtctgaccggccctccacacctccggaggagctgcagctgagtgctctg
gactcatcgtctgtgctggtgagctggcgccctccactggagccaaacggtatcatcatc
agctacaggattttatacagcggcaacctcagccagcccgagcacttgtggggaaacctc
tctcaggacggaagcattaccagtgtggaggtgcagggtttgtttggtggcacccgttac
ttttttaaaatgggtgcatctactgaggtggggccggggcctttttcacctataaaggat
gttcacacccctcttccaaaatatgagctggacatccacgcagtgacaggcatcatagtc
ggtgtgtgtctcggactgatatgcatcctgctctgcatgtgtttcagcttccgtaatggc
aaatccagggaggtgtctgggggtctggaccccacagctgtgacccctcagtacaggaga
ggaggcagccccgcttccaccaacgtgccagagtgcagcgatagccacgagctggagaca
ctaatgcccccaggcaaccaagagtctggccagccgctagaggaggcctcagaggagcag
agcctgatggcaagtgctaatccgagggaaggggaggatgcccccgcacctgaacccaag
gctgcttggaatggctctgtgagccatgactgggccaacagaatcactagatacagagac
accataacagaagactctccaactctcattaatggagctctcaacacgctaattactgat
aacagcacggactcatctgatcgtctgtgcacatccgtgtgcagtaaccaggtcgaggca
gaagtcattgttcactcagagctgacagaacccaggagggagaaagaagaggagggcagc
aaaagggagatggattctaacacccccagaggaccctcattatccgaggacagatattcc
cctttgagcgagccatgcccaccaggcgaggacgacacactagaaaaactatcactggct
caaagccccttgagtcttccctcgctaaagttggtggctaatcacaacggggagctggaa
ggcatgggagaccagccgaatgcagactcagagccacagcaagacattgggctaaccaat
ggcttccactccccaaagacggtgcgtacggtgctgaggtcagagcatctggaaaacgga
gactccagacactgcccctcggcaccagggaaggccatctctgccgggctgtcccctgcc
ccctttgtcagctccggccttgtccactctacctcagcagcacacagttatctgtgcccg
tag
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