Acanthopagrus latus (yellowfin seabream): 119018592
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Entry
119018592 CDS
T08233
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119018592 (tp53bp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
Tudor_3
DUF4537
BRCT
Tudor_2
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
119018592
NCBI-ProteinID:
XP_036952278
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All DBs
Position
4:complement(33083743..33104989)
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AA seq
1750 aa
AA seq
DB search
MDPSGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTARSPVL
ELISSPLGSRSSQTDSQSESSQSNNQADPGILTSADPSSAFQEESQVLNICPPPNKKKCS
PEDTDMESGADSTTHCIQSEEGHSQFGFLELSQSQDLRGEVMNSREEEEEEEEDDTVPQP
DSERRTKLAAEQNVSPRTSESRDNKAVRSEVSSSSSLESPGQSGRQLSVQALLHSQGLQA
SSEQDQQDCEILSSQEDMFDPDKTGAAVDSTVSEPEQQGPPTSTPASTLRLLHLSGQGTL
VQESLSQSSVDYVAPTPDNFSHTPLIVPSSPTEAENEHGADEPMDTSLPPEDRAAEKEEP
MDTEAASKPHPSASTPVSQNSPGFVLERTLSIPSQPEFSHDVFIPTQSQEAPQQSEKKTE
SQSQRLDSAPFSLPLQLSVNTESNSPAQQTPQHQEEDSQATQIEDLEEPPGADTSDSVTS
HSDQRSKSNGVPPESQTATSSKASTSSETAKHRSECAKDEQSKTNPSQKSDLHKTTSLNV
QNVNVKDTKEASSADVVSCSQPKFDSSDLTVNSCVQETLSDTTPCSLPSQSMISQTSAVD
VVKSSVDSRAKSQSVESSSQKCGAVGNSQRVKDMMDERDQGEAEEEEEEEVMEEEEEEEE
EEEENTVGGRASGMALLLSQSQLLSPEPMEEDSEDRGEDSVIVVTDSERDSQILQKDVTP
QSKANSSQPIRDKVTASTNGHESQAQVKKVHVDSDRLSQTEKTGPEPEGLKDKSLSDSSG
EISFHFTLPKEGELIGPVVGATPPLINQLKQTLRHSTPIEITSFNDKSNVASDVSADVAM
AASAITSGDSGEDTVEKGDGKLSLRMKLVTPVEEGSSERFSLQKPTLSEEVGSGIKATTV
AKAVTSSPSVFSRVRQVHRQQDAEDDTTPVRGDLFASPQRSSQASSLGCNSLPNSQSEPS
QQEALATSQENPKDRPGPAEQSQGGRGPPEAPEQPNTIRTEARQRVSQQVFDNSISSSPS
KLRQRTVSQQTSFDAPGLRSPAGRGERETPSFRRNTGPSHRRHVRTIQEVRTTITRIITD
VYYEDGKEVDRKVVEESEEPVVDCQVLDSDISPCRTGSSSVTSGDLADISSLSSKASSLQ
HSSGGTSGSTSLSRPDFIMPPSRGAKSISPRRGGGHQQRGHRGHRAGSVFAMDRGFGTPG
SRAFVPLSPRGRARRGRPPSRSPMSRRGGGGGGSLQRLDGPSHYSSEDEPFTRMLPPRLP
TSPTDAELPSHSDSLRSSSEEASSAGSSFVGLRVVAKWSSNGYFYSGRIIKDAGEGRFRL
RFDDGYECEVAGKDILLCDPIPLETEVTALLEDEYFSIGVVRGHKTEGQDLFYNVEKDGQ
KQWYNRTAVILSLEQGNKLREQHSLGPYEPSTPLAKASDISLDNLVEGKRRRRGGPAGEN
TPNRGSSSSPRTPGTSSKRKLMSSEDDRTPAKRGRRGARAAQRVGVCNTSGSGTDLPGRS
CDVAETHGPLPQNTSLFMGFAFMLTVSSECDRLTNKLSSDEEDEGEDYVQTGPYNKTYTE
SQLQAGGGFILPDFNEEQCKAAYQSLLIADQHCRTRKYLLCLASGVPCVSHMWVRDCCKD
NKLLNYRNYLLPAGVGPDDSIVEWHPRCSPFKALRVLLVFEKPVELWAQLITLGGGSSVR
QFQTDKDSSDIPAGKYDVVVTDRACPPLVEKNVTSQEVPLVSPEWLIQSVIRGECLGFHS
KPQYRHDYSS
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagcggaagtgaactggactccagcctgcctcagcccgagaacccgtgtctg
atcgtggaggactcccagccggacagcgtcgccctggaagacgatcccgagagcagctac
cgagctctgctggcccgtcgcctgtccagcctgcagcccaccgcccgcagcccggttctg
gaactgatttcctccccacttggaagccgaagctcccagactgacagccaatcagagagc
tcccagagtaacaaccaggctgaccccggcattctaacgtctgctgaccccagttcagca
ttccaggaggagagtcaagttctcaacatctgccctcctccgaacaagaagaagtgttca
ccagaggacacggacatggagtctggagctgattccacaacacactgcattcagtctgag
gagggacactctcagtttggtttcctggagctctctcagagtcaagatctgcgcggtgag
gtgatgaacagtcgggaagaagaagaagaagaagaagaagacgacaccgtgcctcagcca
gacagtgagagacgcaccaaattagcggcggagcagaacgtcagccccaggacttcagag
agtcgggacaacaaggcagtgagatcagaggtgagctccagcagctcactggagtctccg
ggtcagtccggcaggcagctgagtgttcaggctctgctgcactcacaaggcctccaggcc
tcgtctgagcaggaccagcaggactgtgagatcctgtcctcacaggaggacatgtttgac
cctgacaagacaggcgctgcagtcgacagcaccgtgtctgagccggagcagcagggtccg
cccacgtcgacaccagccagcaccctgcgactgctgcacctgtccggacagggaacactg
gtgcaggagagtctgtcacagagctctgttgactacgtcgctcccactccagacaacttc
tcccacacgcctttaattgttcccagctcaccaaccgaagcagagaatgaacacggtgct
gatgaaccgatggacacttctctgccccctgaagaccgagcagcggaaaaagaagaaccg
atggacacggaggccgcctctaagccacacccatctgcttctactcctgtatcccagaat
tcccctggttttgtgttggagcgaaccctctcgattccctcccagccagagttctcccat
gacgtgttcatcccgacgcagagtcaggaggcaccgcagcagtcagaaaagaagacggag
tcacagtctcagcgtcttgactcggctcctttcagtttgcctttgcagctctcggtgaac
actgagagcaacagtccagctcagcagacgcctcaacaccaggaggaggacagccaggcc
acgcagatagaagacctggaggagccgcccggcgccgacaccagcgactctgtgacctca
cacagcgatcagaggagcaagagcaacggtgtcccgccagagtcacaaactgccaccagt
tccaaagcttccacgtcttctgaaacagcaaagcatcgcagcgaatgtgccaaggacgag
cagtccaagaccaacccgtcacagaagtctgacctgcacaaaacgacttctttgaatgta
caaaatgtgaatgtaaaagacacaaaggaggcgagctctgctgacgttgtatcctgctct
caaccaaagtttgattcctcggatctgactgtgaacagctgtgtgcaggagactctttca
gacacgacgccctgcagtttgccctctcagtccatgatctctcagacgtctgctgtggat
gtggtgaagagctctgtagactcgagagcaaagagtcagtctgtagaatcatcctcacaa
aagtgtggagctgttggaaacagtcaaagagtcaaagacatgatggacgagcgtgaccag
ggtgaagcagaagaggaggaggaggaggaggtgatggaggaggaggaggaggaggaggag
gaggaggaggagaacacagtgggaggcagggcttcaggaatggctctgcttctctcccag
agccagctgttgtctcctgagcccatggaggaggacagtgaggacagaggagaggacagt
gtcatcgtcgtcacagacagcgagcgagactctcagatccttcagaaggatgtgacgccg
cagtcgaaggccaacagttcccagccaatcagagacaaagtgactgcttccaccaacggc
cacgagtcccaggctcaggtgaagaaggtgcacgtggattctgataggctgtctcagact
gagaagacgggaccagaaccagaggggctcaaagataagagcctgagtgacagctcggga
gagatttcgttccacttcacacttcctaaagaaggcgagctgattggtcctgtcgtcggt
gccacgccccctctaatcaaccagctgaagcagacgctgagacacagcactcccatcgag
atcacttccttcaacgataagtcaaatgtggcgagcgatgtgtctgcagatgtggcgatg
gcggccagtgccatcacgtcgggggacagcggggaggacacggtggagaagggagacggg
aagctgagtctgaggatgaagctggtgactcccgtggaagaaggcagctcggagcgcttc
agcctgcagaagccaacactatcagaagaggttggatctgggatcaaggctaccaccgtt
gcaaaggctgtaaccagcagcccgtcagtgttcagtcgtgtcaggcaggtgcacaggcag
caggacgcagaggacgacaccacacctgtcagaggggatctcttcgcctcgccgcagagg
agctcccaggcgtcctcgctgggatgcaacagccttccaaacagccaatcggagccgtcg
caacaggaagcgctggctacatcgcaggagaaccccaaggatcgtcccggccctgcagag
cagtcgcagggcgggcgaggaccacctgaagctccggagcagcccaacactatcaggaca
gaggccaggcagagggtctcccagcaggtctttgacaacagcatcagctccagtccgtcc
aagctccgtcagcggacagtttcccagcagaccagcttcgatgctccggggctgcgctcc
ccagctggcaggggtgagcgagagactccgtccttcagaagaaacacaggcccctcccac
cgcagacacgtgcgcaccatccaggaagtaaggaccaccatcacacggatcatcacagac
gtgtattatgaggacggcaaagaggtggatcgcaaagtcgtggaggagagcgaggagcca
gtggtggactgccaggtgttggacagcgacatctctccgtgccgcacaggcagcagctcc
gtgacctctggtgacctggctgacatcagctctctgtcctccaaggcgtccagcctgcag
cacagttctggaggaaccagcggcagcacgagcctcagcaggccagacttcatcatgccg
cccagccgaggagccaaatccatcagtcccaggaggggaggcgggcatcaacagaggggt
cacaggggtcacagggcagggtcagtgttcgcaatggacagaggcttcggcaccccgggg
tcccgggccttcgtcccactgagccccagaggacgggccagaaggggccggcctccgtcc
cgctcccccatgtccaggagaggtggaggtggtggtggctcactgcagaggcttgacggt
ccgtcacattactcctcggaggacgagcccttcacccgcatgctgcctccacgcctcccc
accagccccacagacgccgagctgcccagccactccgactccctcaggtcatcgtcggag
gaggcgagctcggccgggagcagcttcgtcggcctgcgggtggtggccaagtggtcgtcc
aacggctacttctactcgggccgcatcatcaaagacgccggcgaggggagattccgactg
aggttcgatgatggttacgagtgtgaggtggcggggaaggatatcctgctgtgtgatccc
attcccctggagacggaggtcaccgctctgctggaggacgagtatttcagcataggtgtc
gtccggggccataagactgaggggcaggacttgttctacaatgtggaaaaggacggtcag
aagcagtggtacaaccggaccgcggtcatcctgtctctggagcagggcaacaagctgagg
gagcagcacagcctcgggccctacgagccctccactcccctggcaaaggcctccgacatc
agcctggataacctggtggaggggaagaggaggcgcagaggaggccccgcgggtgagaac
actcccaaccgcggctcctccagcagcccccggacccccggcacctccagcaagaggaaa
ctgatgagctccgaggacgacaggacgccggccaagagaggccgcaggggcgccagagcc
gctcagcgggtcggtgtgtgtaacacctccggcagcggcacagatctccccggtcggtct
tgtgacgtggcagagactcacggcccgctgccccagaacacgtctctcttcatgggcttt
gccttcatgctgaccgtctcgtccgagtgcgaccggctgaccaacaagctcagcagcgac
gaggaggatgaaggcgaggattacgtgcagacaggtccgtataacaaaacatacacagag
tctcaactgcaggcaggtggaggcttcatcctgccggacttcaacgaagaacagtgtaag
gctgcttaccagagtctgctgatcgcagaccagcactgtcgcacaagaaagtatctgctg
tgtttggccagcggggtgccgtgtgtgtcgcacatgtgggtgagagactgctgcaaagac
aacaagctgctcaactacaggaactacctgctgccggctggtgtggggccggacgactcc
atcgtagaatggcatccccgctgcagcccgttcaaggctctgcgggtcctgctggtgttt
gagaagccggtggagctgtgggcgcagctgatcacactgggcggaggctcgtctgtccga
cagttccagaccgacaaggacagttcagacattcctgccggaaagtatgacgtcgtggtg
acagaccgtgcctgtccaccattggtagagaaaaatgtgacatcacaggaagtcccgctg
gtgtctcctgagtggctcatccagagcgtcatccgcggagagtgcctgggtttccacagc
aagcctcagtatcgccatgactactcgtcataa
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integrated database retrieval system
