Acanthopagrus latus (yellowfin seabream): 119018646
Help
Entry
119018646 CDS
T08233
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119018646
03036 Chromosome and associated proteins [BR:
alat03036
]
119018646
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119018646
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119018646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Roughex
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-met
LIM
DTHCT
zf-C2H2_6
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
119018646
NCBI-ProteinID:
XP_036952371
LinkDB
All DBs
Position
4:complement(22877269..22886222)
Genome browser
AA seq
764 aa
AA seq
DB search
MEGEVVTMETTQADGKALPEGGETLMQGAAIAQQGEVAGNMEMMVMDALDPTLLQMKTEV
LEGGGTVTVTGGDDGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTATVEGLQATYVDA
SAGNKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQGSMAEEEGEEPA
EIETAVPQQEEAEWSKDPDYQPITTLRKGKKGKKSRLRYGEGNRDMDVSVYDFEEEQQEG
LLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHK
CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSM
CDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHAR
FTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAV
FHERYALIQHQKTHKNEKRFKCEQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFRQK
QLLDMHFKRYHDPNFIPTAFVCSKCSKTFTRRNTMLRHAENCNGEVADEENGNPTPKKGR
RGRKRKMQTRRNDDDDDTEAEAEAELDDEEEEEEEEEEEDEELLSGIEVEQAPPVVPIPA
PVEPPVKRKRGRPPKNKPDTAAIIRVEDEATGEVDDIIVKKEVGAEQDDQEDGNDETVEQ
VVVGGGKSTIQMELSSQEGGTAQLSEAPPNGDLTPEMILSMMDR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaggttgttaccatggaaaccacccaggctgatggaaaggccctaccagaa
ggaggagagaccttgatgcaaggggcagccatagctcaacagggggaggtggctggtaac
atggagatgatggtgatggatgctcttgatccgactctgctgcaaatgaagacggaggtg
ttggagggcggtggcaccgtgactgttactggtggtgatgatggtcagatcatcacactc
caggtggtgaatatggaggagcaggctggagctgcattaggtcttggtcagcttcagctg
gtgcaggtacctgtcacaacagcaactgtggaagggctccaggccacctatgttgatgca
tcagcaggaaacaaagatgcagagccggttatctgtcacactcttcccttgcctgagggt
ttccaggtggtaaaagtcggggccaatggtgaagtagagactgtagagcaggaggagctc
caggcagcccatgaggagcttcaaggatcaatggcagaggaggaaggagaagagccagca
gaaatagaaacggctgtgccacagcaagaagaagcagaatggtccaaggaccctgattac
cagcccatcaccaccttgcgtaaaggaaagaaaggaaagaagagccgcctgcggtatggg
gagggcaatcgtgacatggatgtctctgtgtacgattttgaagaagagcagcaggagggg
ctgctgtcagaagtgaatgctgagaaggttgtaggcaacatgaagccaccaaagcccacc
aagatcaagaaaaaaggtgtaaagaagaccttccagtgtgagttgtgtagctatacctgc
ccaaggcgctccaacctggaccgacacatgaagagccacacagacgagagaccgcataaa
tgtcacttgtgtggacgggcttttcggacagtgacactgctgaggaaccacctcaacaca
catacaggtactcggccacacaaatgcacggattgtgacatggcatttgtgaccagcggt
gaattggtgcgtcatcgtcgttacaaacacacgcatgagaagccctttaagtgctccatg
tgtgactattgcagtgtggaggtcagcaagctgaaaaggcacatccgctctcatacagga
gagcgacccttccagtgcagtctgtgcagctatgctagcagggacacgtacaagctgaag
agacacatgaggacacactcgggtgagaagccgtacgagtgctacatctgccatgcccgt
ttcacacagagtggcaccatgaagatgcatattctgcagaaacacactgagaatgtggct
aagttccactgcccacactgtgatactgtcatcgcacgcaagagtgaccttggtgttcac
ttgcggaagcaacactcattcattgagacaggaaagaaatgtcgttactgtgatgctgtt
tttcatgagcgatatgctctcatccaacaccagaagacccacaagaatgagaaacgtttc
aagtgtgaacagtgtgactactgttgccgacaggaacgccacatgataatgcacaagcgc
acacacactggagagaagccgttcgcctgcagccagtgtgagaaaacattccggcagaag
cagcttctggatatgcacttcaagcgctaccatgatcccaactttatccccactgccttc
gtctgcagcaagtgcagcaaaaccttcacccgcaggaatactatgctgcgtcatgctgag
aactgcaatggtgaggttgctgatgaagaaaatggaaaccccacacccaaaaagggtcgc
aggggcaggaagaggaagatgcagactaggaggaatgatgatgatgacgacacagaggct
gaggctgaggctgaactggatgatgaggaagaggaggaggaggaggaggaagaggaggat
gaagagcttttaagtggaattgaggtggaacaggccccaccagttgtacctatcccagcc
cctgtggagccaccagtcaagaggaaacgtggacgccccccaaagaacaaacccgacacg
gctgcgattatccgtgttgaggatgaggccaccggagaggtggatgacatcatcgtgaag
aaggaggttggcgctgaacaagatgaccaggaagatggcaacgacgagaccgtggagcag
gtggtggtcggtggagggaagtctaccattcagatggagttgtcgtcccaggaagggggc
acagcacagctgtctgaagccccacctaatggagacctgacccctgagatgatcctcagc
atgatggaccggtga
DBGET
integrated database retrieval system
