Acanthopagrus latus (yellowfin seabream): 119018690
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Entry
119018690 CDS
T08233
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin isoform X1
KO
K27892
neural-cadherin
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119018690 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Cadherin related
119018690 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
EGF
Cadherin_pro
CADH_Y-type_LIR
Cadherin_2
RET_CLD1
hEGF
Y_Y_Y
Big_9
Motif
Other DBs
NCBI-GeneID:
119018690
NCBI-ProteinID:
XP_036952443
LinkDB
All DBs
Position
4:9956957..10225098
Genome browser
AA seq
2956 aa
AA seq
DB search
MIWIALLAVLVSCALGNRTAEQVPFFHGHVFENSSPGSRVNGLSVPLKRLNSQRLCGTGE
PGAAAAHFKLTGDGSENFRVFAHNKRGHVLLKTSGILDREEQAEYALGLGLCCGQCAGLS
RDEAHESLVVAEVASIKVDVLDTNDHQPTFPSRDVRLSLDDATALRTSVYTVTARDDDSG
KNAELIYFVLPKNGSFYAVPKTGDILLVDSILGLDEPIKFEVFARDRGWPPRTSQSVAVE
ISPRQWPASPSSQSPQQERRKPKSQTKVPERRSRSVTESDGPVFINVSEDAGIGSVVMNL
NPVRFQSAAFELVEPDVESSPVSVSRDSGDIVILRRLDRETEPLVEISVRVQDKRGPEWY
LVRVELTVTDVNDNIPEWSMVPAPYLAVVSPEASAGSLVYKLHAQDGDEGNNGEVEYFLS
DGGDGRFEVDRKSGQIRTTGLPLQQDREYLLTVVAADRLGSRSAPAVISVVAGARPPQFT
NASFTIAIPENTPEGQPFLVTPAVSFQKKPISYSLLINPSSLFSISAETGEISLTRPIDY
EGDQHRYLLLVRASEGLDSMSSAAEVRVVIVDENDCVPEFLQSIYSKDGVPETVTTATSL
LQVSANDCDSEENAELTYYTLSPDFTISPHGTIFPSGPLDYERPNHLYEFVVMAVDKGEV
PRTGTTTVRIRMANVNDEAPEFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITYRITT
GNEEGNFVIDSQKGLIRLRSSPPPHLQGVEYILNVTATDDNASGGPQALSSTAQVVVGVD
DVNNNKPVFEKCQQYRESTSVLENQPAGTFVLQVHAVDADEGSNGRVTYGFMHKDSTVPA
FSIHPDTGVIVTARKFDRERQREYAVTVTATDQAADPLIGICQLNILILDQNDNSPKFEN
IRYEYFLREDTMIGTSFLRVAAHDDDFGTNAAVTYSMSSEQPEYLRVNPLTGWVYVNQPI
SQRTFITREIVATDGGNRSSSVELSVTITNVKNQPPQWEKDSYSVVIQENTVRDTPIVTI
KATSPLGDPRVTYNLEDGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFMLRV
RAQNVAAVPLAAFTMVYVNVTDVNDNVPFFTSSIYEASVTEGADSGTLVFQVSANDLDLG
LNGKISYSLLEDRSGDHQYFSIDPERGSIYTQTVFDRETKSSYLLEVQSVDGWESARPGK
HGQPNSDTAYVRVFISDVNDNKPAFAQASYEVDVDEDADVGFAILTVSANDGDEGGNAKL
RYQITSGNTGGVFDVEPEVGTIFIAQPLDYEQNKRYKLHVLASDGKWEDYTTVTVNVVNK
NDEAPVFTVNEYYGSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESEFIID
EVTGKIYAQRTLDREERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPVFTCAPSC
HGDVAENSLVGTSVMEMTATDLDDSAVGQNAVLSYRIIGSLDATSIGVGGVPTFSEMFTI
NPTTGTISVAMGGLDREQVESYLLVVEARDGGGMTGTGTATIQIKDMNDHAPRFIDHSCM
ARISENAEPNAEVLELAAEDKDTGENAQLTFSVVAGDQEQKFYMVSHKQEQRGTLRLKKR
LDYERHSEQRFNLTLKVEDLDFSSLLHCVVEVEDYNDHAPVFIPHFLSLAPLPEDITMGT
SVAHLVASDSDSGQNREITYSLSEDSDPDGLFTIDQSGVLSVARPLDREGMPQHHLVVIA
TDHGVPPLTGSATVQLPLLDVNDNGPEFEAAYSPIVFENVAGPQVVRMNQTSTLLRAVDQ
DSPENGPPFHFTVPSEYRHSNDFYLQDNLNGTATLTALRTFDRERQKEFLIPIVMSDSGH
PAKTVTSTLTVTIGDQNDHAHVAGEKTIFINSHRGRMPTTVLGKVYSPDPDDWDNKTYVF
EGHVPSYFILNKRTGFLIIKENAPPGTYEFQVRVSDGVWPDAVSTVIVHVRELRDEAIYN
SGSLRLADIIAKEFIELRGKQRSRYELLVDFLSEMLSVPPDDVNIFSLMDVKERMLDVRF
AVQGGPSFLQPEKMHGYLAAHKQKLQSFLQISVFQIRVDECPGSECAGASGCTNVLNVRD
TPTVVDCGTMSLVSVTVESTAVCSCPGREQSHQPCNTYPRNPCFNGGMCVDTQHGYRCQC
PAQFEGPECQQNKHSFHGNGYAWFPPITPCFESHVSLEFITDVADGLLLYSGPLAQLQAW
DHEDFLAIELIDGTPTLKINHGSGTVVLQLPGNVNVADRRWHRLDVRSNSKEVRFTLDRC
SGAAVMEMEGLGSWLTTQDHSSCEVTGVTPNTDRHLNMSHVLQLGGVNEDIPYIYPQLQH
KHFTGCIRNLIVDSKLYDLGSPADSQSSSPGCLTTDSSCVNMGYPSCGHRGRCHGEWGSF
SCQCVPGYTGHQCEEEALEYSFDGHSHVHFQLASPLPARRTWVQVLVRTRKHSSTILNLT
SKEQSEYIRLEIFQGLLCVFYNLGDGDYNLTLPTYRLDNGEWHEVFLDRHDNEMMLQLDG
GGGQREVTGSHGRSREIIIDPTVVMLGNTFPSGINKSFQGCMRDARLNGRYMPLDSQPRD
GVSQVSIQGLSLGCSSDSCKRNQCSPPFTCVDLWRVHECRCPPGHMIRVNGTRKSCVYTL
CATRPCHRGTCVAQSPSKFTCHCPEGYRGRHCETTLAIYREDVGLSFSSLFAICICFMAL
LVLLLGIFLYTRWRSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAE
LQKSLQPSPAQSVQYCRSRALHHPPPPHHHHHHHLLHQAAPAPPSTQSLDPLSRTASSTT
LPPSVASTSSTATTTTSLRRDVPPTRLPAQGQARPSQLARRSLSFSSQDLARYLCEIIRD
ADQHPDTGPFDSLQVFSTEGGGSPAGSLSSFSSAGLDGGSGGDGGGEGRREESLGEWGPR
FEKLRALYERAEASDL
NT seq
8871 nt
NT seq
+upstream
nt +downstream
nt
atgatttggatcgcgcttttagccgtcttggtttcgtgcgccctcgggaacaggaccgcg
gagcaggtgccgttctttcacgggcatgtgtttgagaactcgtccccgggctcccgggtc
aacggactgagcgtcccgttgaagcggctcaactcgcagaggttgtgcggcaccggggag
ccgggcgcagcggcggcacacttcaaactaacgggggacgggagtgagaatttccgtgtg
tttgcgcacaacaaacggggtcatgttttgttgaagacctccgggattctggaccgggag
gagcaggctgaatacgcactgggtcttggcttgtgttgcgggcaatgcgcgggactctcc
cgggatgaggcgcacgagtctctggtggtcgcggaggtggcgtccatcaaggtggacgtc
ctggacaccaacgaccaccagcccaccttccccagtagggacgtgagactgagcctggat
gatgccactgcgctccgcacgtctgtctacacggtcaccgcgcgggacgacgacagcggc
aagaacgcggagctcatctacttcgtgctgcccaaaaacgggagtttctacgcggtgccc
aaaactggagacatcctcctggtcgattccatcctcggtctggatgaaccgatcaagttt
gaagtgttcgcccgggaccgcgggtggccacctcgcacgagccagagcgtggcggtggag
atcagcccgcggcagtggcccgcgtcgccctcctcgcagagcccccagcaggagagacgg
aagcctaaatcgcaaaccaaagtgcccgagcgaaggtccaggtcggtcacggagtcagac
ggccccgttttcatcaacgtgtccgaggacgcggggatcggttccgtggtgatgaacctg
aacccggtgaggtttcagtcggctgcgtttgagctggtggagcctgacgtggagagctca
ccggtcagcgtgagcagggacagcggggatatagtcatattacggaggctggaccgagag
acggagcccctggtggagatcagcgtcagagttcaggataagagaggtccagagtggtac
ttggtcagagtggagttgactgtgactgatgtaaatgacaatatccctgaatggagcatg
gttcctgctccctacctcgctgtggtttcccctgaagcctctgcgggctcactggtctac
aagctccatgcacaggatggggatgaaggcaacaatggcgaagttgagtacttcctttct
gatggcggtgatggtcgttttgaagtggacaggaagagcggccagatacgaactacaggc
ctccccctgcagcaggacagggagtacctgttgacggtggtggccgccgaccggctgggc
agccgcagcgcccctgctgtcatctctgtggtggctggagcccggccaccacagttcacc
aacgcctccttcaccatcgccataccagaaaacacccctgaaggacagcccttcctggtc
acacctgccgtgtccttccagaagaaaccaatcagttacagccttctcatcaatcccagt
agtctcttctccatctcagcagagactggtgaaatcagcctgacccgccccatcgactac
gagggcgaccagcatcgctatctgctattggtgcgagccagcgagggcctggacagcatg
agcagtgcagctgaggtgcgtgttgtcattgtcgatgaaaacgactgtgttcccgagttc
ctccagtccatctacagcaaggatggtgtaccagagactgtgactacagcaacctccctg
ctacaagtatcagccaatgactgcgactcggaagagaatgcagagttgacctattacacc
ctgagtccagacttcaccatttcccctcatggaaccattttcccttcggggcctctggac
tacgaaaggcccaatcacctgtatgagtttgtagtgatggcagttgacaagggggaggtc
cctcgcaccggcacaactacagtgcgaattcgaatggctaacgtcaatgatgaggcgccc
gagttctctcaacatatatatcggacttttgtctcagaggacgcgggccccaacacactt
gtagccacggtgctggcaaaggaccccgatggggatgggatcacgtatagaatcacgacc
ggaaacgaggagggcaactttgtcattgacagccaaaaaggactgatccgtctgcgctcc
agcccaccccctcacctccagggcgtcgaatacatcctcaacgtcacggcaacagatgac
aacgcctcaggtggacctcaggccttgtcgtccacggctcaggtcgtcgtgggagtggac
gacgtgaataacaacaagcctgtcttcgagaaatgtcagcagtaccgagagagcacatcg
gtcctggagaaccagccagcgggaacttttgttctgcaggttcacgccgtggacgctgac
gaaggctctaatggcagggtcacatacggcttcatgcacaaggactccaccgtgcctgcg
ttcagcatacacccagacaccggagtaattgtgacagccaggaaatttgaccgcgaacgc
cagcgggagtacgcagtgacggtgactgccactgaccaggccgctgacccactgattggc
atttgtcagctcaacatccttatcctggaccagaacgacaacagtcccaagtttgagaac
attcgatatgagtacttcctccgcgaggacacgatgatcgggactagtttcttgcgcgtg
gcagctcatgacgatgactttggaaccaacgcagccgtcacgtactctatgtccagtgaa
cagccggagtacctcagggtcaaccccctgacaggttgggtgtatgtcaaccagcccatt
tctcagaggaccttcatcaccagggaaattgtggctacagatgggggaaacaggagcagt
tcagtggagctgtccgtcaccatcaccaatgtgaagaaccagcctccacagtgggagaaa
gacagctacagcgtggtcatacaagaaaacactgtccgggacacacccatcgtgactatt
aaagccacctcccctcttggagatcccagggtaacttataacttggaggatggcatggtg
ccagagaccaacatgccggttcgcttctacttgacccccaaccgagaagatggctcagcc
tccatcctggtggcagagcccctggactacgagaccaccaggaacttcatgctgcgtgtt
cgagctcagaatgtcgctgctgtaccactggcggccttcaccatggtttatgtcaatgtt
acagatgtgaacgacaacgtcccatttttcacttcctctatctacgaggcgtccgtcact
gaaggggcagattcaggaactttggttttccaggtgtcagccaatgaccttgacttgggt
ctcaatggcaagatctcctactccttgctagaggatcgcagcggtgaccaccagtatttc
agtatcgatccagagcgaggatccatctatacacagaccgtgtttgaccgcgagaccaaa
agctcctatctgttggaggttcagtctgtggacggctgggagtcggcacggcccggcaaa
cacgggcagcccaactctgacacagcatatgttcgcgtttttatcagtgacgtgaacgat
aacaagcccgcgtttgcacaggcatcctatgaagttgatgtggacgaggatgctgatgtg
ggcttcgccattctcactgtcagtgccaatgatggggatgaaggtggaaacgctaagctg
cgttaccagatcacatcggggaacacaggaggggtgtttgatgtggaaccagaggtgggc
actatctttattgcccagcctctggactatgaacagaacaaaaggtacaagcttcatgtc
ctggcttcagatgggaagtgggaggattatacaacagtaacggtaaacgttgttaacaag
aacgacgaggctccggtgttcaccgttaatgagtactacggcagcgtcacagaggaactg
gatggctcaccggtgtttgtgttgcaggtgacagcgtctgacccagataaggatgctgac
caggaggccctgcgttactccctccatggccagggtgctgagagtgaattcataattgat
gaggtcacaggaaagatctacgcccagcggacgttggaccgcgaagagcgagccgtgtgg
cgtttcgtcgtcttggccacagacgagggtggcgaaggtctgacgggtttcaccgacgtc
atcatcaacgtgtgggacatcaacgacaacgcgcccgtcttcacctgcgcccccagctgc
cacggagacgtagccgagaactcattggtcgggacatctgtgatggagatgacagccacc
gatctggatgactctgcggtcgggcagaacgccgtgctctcttacaggattataggtagc
ttagacgccaccagcatcggggtcggaggagtacctaccttctcagaaatgttcaccatc
aacccgaccacagggaccatcagtgtagccatgggcggtctagacagagagcaggttgaa
tcctacctcctggtcgtagaggccagagatgggggagggatgacaggaacgggaaccgcc
accattcagatcaaggatatgaacgatcatgctccaagattcatcgatcactcctgcatg
gcaaggatctctgagaatgcagagcctaatgcagaggtcctggagctcgctgctgaggac
aaggacactggagaaaatgcccagctgaccttcagtgttgtggctggagaccaagagcag
aagttctacatggtcagtcacaagcaggagcagcgcggcactctgaggcttaagaaacgt
ctggactatgaacgccacagtgagcagaggttcaacctcacgctgaaggttgaagacctg
gacttctctagccttctgcactgtgtggtggaagtggaggactataacgaccatgctcca
gtcttcattccacacttcctgtctctcgccccgctacctgaggacatcaccatgggaacc
agcgtggcacatttggtggccagtgattcagattcaggccagaaccgagagatcacctat
agcctgtctgaagactcagatcctgatggtctgttcaccattgaccagtccggtgtactc
tctgtggcccgacctcttgatcgggaggggatgcctcagcatcacttggttgtcatagca
actgatcatggagttccacctctaacaggcagcgcaacagtccaactgcctctgttagat
gtaaatgataacggaccagagtttgaggcggcatactccccgatagtctttgagaatgtg
gctggaccacaggtagtaaggatgaaccaaacgtcgaccctcctccgagctgtggaccag
gactctccagaaaatggaccacccttccacttcactgtcccctctgagtatcgccacagc
aatgatttctacctccaagacaaccttaatggcactgcgacactaacagctttgcggacg
tttgaccgtgagcgccagaaagagtttctcattcccattgttatgagcgacagtggccat
ccagctaaaacagtgaccagcaccctgacagtaaccatcggtgaccaaaatgatcatgca
catgtggcgggggagaagacaattttcatcaatagccaccgaggccgaatgccaaccaca
gtgcttggaaaggtctactctcctgaccctgatgactgggacaacaagacatatgtcttt
gaaggacatgtaccgagttactttatcctaaacaaaaggacaggtttcctgatcatcaag
gagaacgctccacccggcacctacgagttccaggtccgtgtgtcggatggagtttggcca
gatgctgtttctactgtcatcgtgcacgtgagggaactgcgagacgaggccatctacaac
tcagggtctctgcgtctggcagacatcatagcgaaggagttcattgaactgagaggaaag
cagcggagccgctacgagctgctggtggacttcctgtctgagatgctttccgttccacct
gatgatgtcaacatctttagcctaatggatgtgaaagagcggatgctggatgttcgcttt
gctgtgcaaggtgggccctccttcctccagcctgagaagatgcatggatatctggcagcc
cacaaacaaaagctccagtcatttctgcaaatcagcgtgttccaaatccgagtagacgag
tgtcctggttcagagtgtgccggggccagcggctgcaccaacgttttgaatgtgcgcgac
acgcccacagtggtggattgtgggactatgagccttgtgtctgtgacagtggaatccaca
gctgtgtgctcctgcccgggtagagagcagtcccaccagccctgcaacacatatcccaga
aacccctgcttcaatggcggcatgtgcgtggacactcagcatggctacaggtgccaatgt
ccagctcagttcgaggggcctgagtgccagcagaacaagcacagtttccatggcaatggc
tatgcctggtttcctcccataacgccttgtttcgagagccatgtgtcactggagttcatc
actgacgtggctgatggactgctgctgtacagtggccccttagcccagctgcaggcctgg
gaccacgaggacttcctggccatagagctaatagatgggacccccacgttgaaaatcaac
cacggctctggcacagtggtgctacagttgccaggcaacgtaaacgtggcagacaggcga
tggcatcggctggatgtccgcagcaacagcaaggaagtgcgattcaccctggatcgctgt
tcaggggcagcagtcatggaaatggagggactgggcagctggttgaccacccaggaccac
tcttcctgtgaagtgacgggagttacacccaacactgacagacacctgaacatgagccac
gtgctccagctcggtggtgtcaacgaggacatcccctacatctaccctcagcttcagcac
aaacacttcaccggctgcatccgcaacctcatcgtggacagcaagctgtatgatttgggc
tccccggccgactcacagtccagctctccgggctgcctgaccaccgacagcagctgtgtc
aacatgggctatccatcctgcggccaccggggtcgctgtcatggcgagtggggctccttc
agctgccagtgtgtgccgggatacacaggacaccagtgtgaagaggaggccctggagtat
tcctttgatgggcacagtcacgtgcatttccagttggcgtccccactgcccgcccggagg
acatgggttcaagtcctggttcgaacccgtaaacacagcagcaccatcttaaatctgacc
tcgaaggagcagagtgaatacataagactagagatcttccagggtctcctttgtgttttc
tacaacctcggtgacggagactacaaccttaccctgcccacctatcgcctcgacaacggt
gaatggcacgaggttttcctagatcggcacgacaacgaaatgatgcttcaactggatggc
ggtggagggcagcgggaggtcacaggatcgcacggacgaagccgggaaatcatcattgac
cccactgtggtgatgctgggaaacaccttcccctctggaatcaacaagagcttccagggc
tgcatgagggatgcacgtctgaatggtcgctacatgcccctggacagccagccgcgagat
ggggtctcccaggtcagcatacaaggcctctcccttggatgctcatctgactcctgcaaa
agaaaccagtgtagcccccccttcacttgtgttgacttgtggagggtgcacgaatgcaga
tgtcctcctggccacatgatccgtgtgaacgggacgagaaagtcctgtgtctacacgctc
tgtgcaacgcggccctgtcaccgagggacctgtgtggcccagtcaccatccaaattcacc
tgccactgcccggagggttacagaggacgtcactgtgagacgacactggccatctaccgg
gaggacgtgggccttagcttcagctccctctttgccatctgtatctgcttcatggctcta
ctagtgctgctgttgggcattttcctctacactcgctggaggagctacaaagggctgaag
gagggcgtctaccacgtctccgcccaccacgacggctgggaggacatccgagagaacgtc
ctcaactatgacgaggagggaggcggggaggaggaccagaacgcctacgatatggcggag
ctgcagaagtcactccagccgagcccggcccagtcggtgcagtactgccgctccagagcc
ctgcaccaccctcctcctccccaccaccaccaccaccatcatcttctccaccaggcggcc
cccgccccgccttccacccagtcgctggaccccctcagcaggaccgccagctccaccacc
ctgcccccctcggtggcttcaacttcctccaccgccaccaccaccaccagcctccgcagg
gacgtcccccccaccagacttccagctcagggccaggctcggccctcccagctggcgcgc
cgctccctgtccttctccagccaagacctggcccgctatctgtgcgagatcatacgcgac
gcggaccagcatccggacacagggcctttcgactccctgcaggtcttctccacggaggga
gggggctcgccagccggctcgctcagctccttcagctcagcggggctggacggggggagc
ggcggcgatgggggtggggagggaaggagggaggagtcgctcggggagtgggggcctcgc
tttgaaaagctgcgggcgctgtacgagcgagctgaggccagcgacctctga
DBGET
integrated database retrieval system
