Acanthopagrus latus (yellowfin seabream): 119018733
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Entry
119018733 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04137
Mitophagy - animal
alat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119018733
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119018733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119018733
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
119018733
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119018733
Multi subunit type E3
ERAD complex
119018733
LMBR1L-GP78-UBAC2 complex
119018733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_Vps41
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
119018733
NCBI-ProteinID:
XP_036952518
LinkDB
All DBs
Position
4:complement(27685363..27697038)
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AA seq
622 aa
AA seq
DB search
MPLMFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGALDADETPAPSDVDLEHL
NNDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLKHPGTWEGKGTYVYYTDFIMELAMLFLDLVHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDAMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGGQARNQQQGGGMEDNIGPVGAAADARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPPYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERGPSQANSASEEDEGASGSADQGLSESDNM
EVRGGRFSKSAEERQKMLKQRKEELLQQARRRYLNKSPEDQDEDLPGLEEDIAPDFNLTV
LRRRTMAAAAERRMQNQQDPAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgatgtttttggagaggtttccatggcccagcctgcagacctacacagcactg
agtgtggctttgcttgctggcagcatcttcagtgcctacaccactgtgactgacccgggg
tttggggccctggacgctgatgaaacaccggctccctctgatgtggatcttgaacaccta
aacaatgacattagtaacacagaattggcaaccactgtcctgtggtaccttgtcacagac
agtctctttgtatgggtcttagtgaacactttctgctgctctttgatgttaattgctaaa
atgattcagtatgtggtgtttggcccgctcagagtcagtgagaagcagcacctgaaagac
aagttctggaactttatcttctacaagttcatattcatctttggcgttttgaacgtgcag
acagtggaggaggtggtcatgtggtgtttatggttctctgccctggtctttctccatctc
atggtgcagctctgcaaagaccgatttgaatatctgtctttctcgccctcgactcccatg
aacagccatgtgcgagtgctttgtctgctggtctccctgctgctggactgctgtggcctg
gctgtggtctgcggcctgctgggagcttctcatggcatgcacaccctctcctttatggca
gcagagtgtctgctggtgactgtacgcactggacatgtcatcatgcgatactccattcat
ctgtgggatctgaagcatccagggacttgggagggtaagggaacgtatgtctactacaca
gacttcatcatggagctggctatgctcttcctggacctcgttcatcatatacacatgctg
ctctttggtaacatctggctgtctatggcaagcttggttatcttcatgcagctgcggtac
ctcttccatgaggtccagcgccgcgtgcgccgtcacaagaactacctccgtgtcatcaac
aacatggaggccagatttgctgttgccactgcagaggagcttgcagctaatgatgatgat
tgtgccatctgctgggatgccatgttgacagcacgcaaactaccctgtggacatctcttc
cacaactcttgcttgcgctcgtggctcgagcaggacacctcttgtcctacttgtcggaca
tccctgaacattaatggggacgggggccaggccagaaaccagcagcagggtggcggcatg
gaagacaacattggcccagtcggggctgctgcagatgccagaccacatatcaaccaacac
aatcacttcttccactttgatggatctcgcattgccagctggctgcccagtttctctgtg
gaagtaatgcacaccaccaatatcttgggcatcgctcaggcaaacaactcccagcttatg
gccatggcccatcagatccaggagatgttccctcaggtgcccccctacctggttatgcag
gacctgcagttgactcgctctgtggaggtcactactgacaacatcctggagggacgcatc
caggtgcctttcccaacacaggccatagagcgtggcccctcacaggcaaactctgcatca
gaagaggatgaaggagccagtggatcagctgatcagggcctcagcgagtcggacaacatg
gaagtgagaggaggacgtttttctaagtcagcagaggagaggcagaagatgttaaagcag
aggaaagaggagctgctccagcaggcacgcaggaggtacctgaacaagagtccagaggac
caggacgaggatttgcctggactggaggaggacattgctccagattttaacttgactgtg
ctgagacgtagaaccatggcggcagctgcagagagacgcatgcaaaatcagcaagaccct
gcaccctga
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