Acanthopagrus latus (yellowfin seabream): 119018889
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Entry
119018889 CDS
T08233
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119018889 (tfip11)
Spliceosome [BR:
alat03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119018889 (tfip11)
Other components
Complex C specific factors
119018889 (tfip11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
119018889
NCBI-ProteinID:
XP_036952792
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Position
5:complement(11316004..11320993)
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AA seq
834 aa
AA seq
DB search
MSMSHLYGRRGEEEEEEGVEIESFEVTEWDLANEFNPDRRRHRQTKEQATYGIWADRDSD
EDERPSFGGKKSKDYTAPVNFVSGGLRKSAAEEKQLKGEGASDDSDDDGPSAPPPSRSTA
PKKLQMGNFRGNQSQRFAGGIQSGKGIGSWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGI
INPIEAKLRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFRKELGQWRKDPAGPGGK
KKPKYSYRTVDELKAKGKVAGRSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVP
DEGPPSMSTQDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRA
LQSRLDAEQDSIQKMEAVLALVERFPSVEMAPGEGPSLQECARIFETLQTDYYEEYKTMG
LADLAVAVVHPLLKEKLRSWDPLKDSSYCLEDIGQWRAILESRDLLSSGPDSNMDPYHRL
LWEVWIPVMRPCVSGWQPRMVTPMVDCVEVWAPLLPLWMLDHLLEQLILPRLQREVDNWN
PLTDTVPIDSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDNSARLILQPWKAVFT
PGAWEAFMVKNIIPKLALCLEELVINPHQQQMDPFNWVMDWEGMLSPSSLVSLLDKNFFP
KWLQVLCSWLSNSPNYEEITKWYLGWKSIFSDVLLTQPLIKEKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISAGVPTNFKDLIQTKAEE
NNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcccacctgtacgggcggagaggggaggaggaggaggaggaaggtgtggag
atagagagctttgaggtgacagaatgggacctggccaatgagttcaatccagaccgccgc
agacacaggcagaccaaagagcaggctacctacggcatctgggctgacagagactcagat
gaggatgagaggcctagctttggaggcaaaaaaagtaaagactacactgctccagtgaac
tttgtgagtggaggtttgcgtaagtctgccgctgaggagaaacagctaaaaggagaaggc
gcctctgatgactccgatgatgatggaccctcagcaccacccccttctcggagcactgcg
cccaaaaaacttcagatgggtaatttccgggggaaccagtcacagaggtttgcaggtggc
atacagtctggtaaaggcattggtagctgggagaagcacacaaagggaattggacagaaa
cttctgcagaaaatgggataccaaccaggcaaaggccttggcaagaatgctcaaggtatt
ataaaccccattgaggcaaagcttcgtaaaggcaagggagcagtgggtgcttatggcaat
gaacgaacccagcagtctcttcaggattttcctgtggttgactccgaggaagaggaggag
aaggagtttcggaaggagctaggccagtggcgtaaggatcctgcaggccctggaggaaag
aagaaacccaagtactcctacagaactgtcgacgagctgaaggctaaaggcaaggtggca
gggcgcagtactgctgcatccgctggggagttggcacaggtcaaggtaatagatatgact
ggaagagagcaaaaggtatattacagttacagccagatgtccaacaagcacagtgttcca
gacgaaggtccaccgagcatgtccactcaggatcagaagggatctggctttgctcttccc
gaactcgaacataacctgcagctgctgatagacctcacagaacaggacatattacagtct
gccagacgtctgcagcatgaaaaagacgtagttgtgtctctgagccacgagtcacgagcc
ttgcagagcagactggatgcagagcaagattccatccagaaaatggaggctgttctggca
ttggtggagcgttttccttctgtggagatggcaccgggggagggacccagcctgcaggag
tgtgcacggatttttgagactttacaaacagactattatgaagaatacaagacaatggga
ctggcagacctggctgtagccgttgttcatccattactgaaagagaaacttcgttcctgg
gaccctctgaaggacagctcttattgtctggaagacatcggccaatggagagcaatcctt
gaatctagagacctcctctcaagtggcccagattctaacatggatccttaccacagactg
ttgtgggaagtgtggatcccagtgatgcggccatgtgtgtcaggctggcagcctcgtatg
gtcacgccgatggtagactgtgtggaagtgtgggcccctcttctccccctgtggatgctg
gatcacctgttggagcagctgattttaccccggctacagcgagaggtggataactggaac
cctcttactgacacagtacccatcgactcctggatccacccatggcttcctctgctacag
tcacgtctagagcctctttacccaccaatcagaagcaaactatccaacgccttgcagcgt
tggcatcccagcgacaactcagcccgcctcatcctgcagccctggaaagccgttttcaca
ccaggtgcttgggaggccttcatggtgaaaaacatcatcccaaaactagccctttgtctg
gaagagctggttatcaaccctcaccagcagcagatggatccatttaattgggtgatggac
tgggaaggcatgctgtctccctccagccttgtgtccctgctggacaaaaacttctttccg
aagtggttgcaggtcctgtgttcatggctgagcaacagtcctaactatgaggaaatcaca
aaatggtacctgggttggaaaagcatatttagtgacgtcttgctgactcagccgctcatt
aaagagaagtttaatgaagctttggacatcatgaatcgtgcagtgtcttcaggcatgggt
ggatatatgcaacctggtgcaagggagaacattgcatatttaacccagacagagagacga
aaggacttccagtatgaagcgatgcaggagagaagagatgcagagagtgttgctcatagg
ggcatcagcgctggtgtgccgaccaactttaaagatcttatccagaccaaggcagaggag
aacaacattgtttttatgcccttagttgctaaacgccacgagggcaaacagctgtacaca
tttgggcgtattgtcatctacatagacagaggggttgtgtttgtgcaaggagagaagact
tgggtgcccacgtctctgcagagtctgatagatatggccaagtga
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