Acanthopagrus latus (yellowfin seabream): 119018955
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Entry
119018955 CDS
T08233
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119018955 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119018955 (ube3b)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119018955 (ube3b)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
HECT type E3
119018955 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
119018955
NCBI-ProteinID:
XP_036952950
LinkDB
All DBs
Position
5:complement(28038960..28048303)
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AA seq
1068 aa
AA seq
DB search
MFTVPQSSKSDFLDKARQAREERRGQKDKEKAATNIQALIRRFLCRCRLQKQIRKEVDDY
FQASEAGTSKRNALSIFKIARKLLFIYQLEDKMRFEKLCRAILASMEVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWLCCQRLKSLKPDILQDNKMITLYLTMLVTFTDTSTWRIVRGK
GEALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSKPSLSKGTLTAVFTLSLRPVI
AAHFSDNLLRSFLIHIMSVPAIVCHLSVLTPECMASIQTHDLLRKFILFLSREEQCLDIC
VCLEGSHTLCLLGNLIHLGFLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQYLWGVSVIRTLFNDVLSKKLESQEPTPPPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLVLFCDCSRHLI
TILDDIEVYEEQTSFKIEELITISSFLNTFVYKMVWDGILENAKGEKLELFHSVHGWLMV
LYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRNI
VTKEKESLGLIETSSASPHVTHITIRRSRMLEDGYDQLRRLPANSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDIL
SSDFTADERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgttcctcaaagctccaagtccgacttcctggacaaagccaggcaggccagg
gaggagaggagaggacagaaggacaaggagaaggcagcaaccaacatccaagccctgatc
aggaggtttctctgtcgctgcagactccagaagcaaataagaaaagaggttgatgactat
tttcaagcctctgaagctgggacgtcaaaaagaaatgcactgtcaattttcaaaattgca
cggaaattgctgtttatataccagctagaggataaaatgcggttcgaaaagctctgtcgt
gctatccttgccagcatggaggttgaaaatgaacctaaagtctggtatgtttcgttagct
ctctccaaagacctcaccatcccctggctcaaacagataaaagatgtgctgtggctctgc
tgtcagcgactgaagagtttaaagcccgacatacttcaggacaataagatgataacgctg
tacctcaccatgctggtgaccttcacagacacttcgacctggcggatagtcagagggaag
ggagaagctctcagacccgctttgacaaggatttgtgaaaatatcatgggccatctcaat
caaaagggattctattcaattctgcagatcttgctgacaaatggcttggctcgctctaaa
ccgtctctctccaagggcaccctgaccgctgtcttcactttgtcattaaggccagtcatt
gctgcccatttctccgacaacctgctgagatcattcctcattcacatcatgtcagttcca
gccatcgtctgccacctcagtgtcctcactccagagtgcatggcttccatccaaacgcac
gacctgctgcggaagttcattctgtttctcagccgggaagagcagtgtttggacatctgt
gtgtgtcttgaggggagccacactctctgcttacttggcaacttgattcatctgggcttc
cttaatgagaaagtccttgaggaggaggccaaccattttgtgaaggacctcactgacatg
ctgtcctattgccagagatatgtatctcagaagaagtccaacctcacccactggcaccct
gtcctgggctggttctcccaaactgttgactacggtctaaatgagtcaatgccgctggtg
actaaacagctccagtacctttggggtgtttctgtcattcggacactcttcaatgacgtc
ctctctaaaaagctggagagtcaggagcccactcccccgcccccgcagcccagcacatca
caaaacaatctcccagtgaaaaacctcttcaagcgagcgtttcagaagtcggcctccgta
cgaaacatcctgaaaccagtcggagggaagagggttgactcagctgaggttcagaaggtg
tgcagcatctgtgtgctctaccagactgcactgtctacattaacgcagatacgactccag
atactcaccggcctaacacatcttgatgaccttttgcccaaactctgggccttcatctgt
gagcttggccctcagggcggcctcaaactcttcatggagtgtctgaacaatgacactgaa
gagtccaagcagctcctggccatgctcgtgctcttctgtgactgctcacggcaccttatc
acaattctggacgacattgaagtctatgaagaacaaacatctttcaagatagaggaactc
atcaccatctcttcatttctgaacacttttgtgtacaagatggtatgggacggcatctta
gaaaatgctaagggggagaaactggagttgttccacagtgttcatggctggttgatggtg
ctttatgaacgggactgcaggcgacgattcacccccgacgaccactggctgcgcaaggac
ctgaagcccagtctgttgttccaagagctggagaaaggcaagaaaagagcccagctgtta
ctgcagtacatcccacatgtcatcccgcacaaaaacagggttctgctcttcaggaacatc
gtcacaaaggaaaaggaaagtttagggttgatagagacgagctccgcttcgcctcacgtc
acccacatcaccatccgtcgctcgcggatgttagaggatggatatgaccagctccgccga
ttaccagctaattctatcaaaggcgtcattcgtgtgaagtttgtcaatgatctgggagtc
gacgaggctggtatcgatcaggatggtgtgttcaaagagtttctagaggagatcattaag
aaagtgttcaatcctgcgctcaacctgttcaagactacaagtggaaatgaacggctgtat
ccttcacccacatcgtacatccatgagaaccatttgcagctgtttgagtttgtggggaag
atgcttgggaaagccgtgtatgagggcattgtcgtggacgtcccttttgcgtccttcttc
ctcagtcaagtactgggtcaccaccacagcactttctacagctccatcgacgagctgcct
tcgctggactctgagttttacaagaatctcacctccattaagcgctatgatggagatgta
ggggatctaggactgacgttatcctatgatgaggatgttatggggcagcttgtctgtcat
gagctgattcctggggggaaaaccatgccagtcacaaatgaaaataagatcagctacatc
cacctcatggcccacttccggatgcacacgcagattaaggagcagacggcagctttcatt
cggggcttccgcagcatcatcaacccagagtggctgcacatgttttccacgcccgaggtg
cagcgtctcgtctcgggagacaacgctgagatcgatctggacgacctcaagaaacacacc
gtctactatggaggttttcacagcagccatcgtgtcatcatctggctgtgggacatcctg
tcaagtgacttcaccgccgacgagagggctatgttcctgaagtttgttaccagctgctcc
aggcctcctcttctgggttttgcctacctcaaaccacctttctccatccgttgtgtggaa
gtttcagacgaccaggacactggagacactctcggcagtgttcttagaggctttttcact
attcgcaagaaggagccgggcggtcgacttcccacttcatcgacgtgcttcaatctgctc
aagctgcctaactacagcaagaagagcatcctccgcgacaagctacgctacgccatcagt
atgaacacaggcttcgagctctcctaa
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