Acanthopagrus latus (yellowfin seabream): 119019134
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Entry
119019134 CDS
T08233
Symbol
lrp13
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119019134 (lrp13)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119019134 (lrp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
119019134
NCBI-ProteinID:
XP_036953319
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All DBs
Position
5:11530983..11543108
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AA seq
1361 aa
AA seq
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MGGCLFLCAALLQFSGSLQVLVSAGSSPVKCGLGFQQCKDGSECILYSHVCDGERDCQDG
SDEEDCDSVCNKGQFQCAHGKMCIDKEQVCDDIPQCQDRSDELQCTKQTEGCVHQCDNKS
RCLPAKLLCDEEWDCLDGTDEANCEDQEEDGHETEDRTSVTSAPVGSSTPIKCPLGFKAC
KDDSECVLYKHVCDGEADCRDGSDEKECSLECETDQFQCAHGKKCIEQSQVCDGMHQCQD
RSDELGCAKQIEGCAHQCDDNSRCIPNSFVCDGERDCWDGTDEANCADEECSATDFSCTS
GQCVSAKMRCDGHPDCRDRSDEEGCTIAVACTTKHRCPQSKECLVQEWICDGDQDCKDGT
DEKDCPVAPVTCGEFQWSCKSKTKCIPTGWRCDGMKDCGDGSDETECGMMPCLPHQFQCG
SQECLEPVLVCNGITNCADGSDEGGSCQMKCADVDSRCAQDCYSTPQGTRCRCMAGFRLM
EDGLTCADIDECERSGVCSQVCINTPGSFQCDCQPGYIKEAGGHHCKITGEPFLMSSVQT
DLFLLGLRSGSLDVLSSSAKKAILSLDYDWREQRVFWVSLDTESIRWSSLDQKTTGTLIK
GVRADSVAVDWLGRNLYWIDGVNSQIVAVRLVTTTMKSLDHSVILDEDLDQPRSLALLPQ
KGLMFWTEIGNVVKIERAGMDGSERKAVVNSSLGWPGGVAVDAISDRVYWTDERLKSIGS
ATLDGEDIRILQMKETTNPFSLAVFNDMLYWSDAKKRVVLAAHKFSGKNHQILLKRPRQP
FGVKIIHPLLQMAIDSPCEKMKCSHMCVLAPGPKAVCKCPSGLLLAEDGLTCSSLVNSAF
LLMLSPSTVTQIYLQSRHTAAELKGWPEHLALQVPSINEAANMDYSLRDHTLYLTDDGTT
SLSSFRLRDSDLFPQGHLLKLLGDTITAMALDWVTLNIYWSSNKQLRLQVTSITAAHTAV
LIKEGIGRVESIALHPSSGRVCFTNLGPQGLGTMATVECAHMDGAGRRVVWKDAVQPASV
TFSSNGDTIYWADTGLGTIGSVQLDGSGYRELKAGDGLAAVALSDDTLLWMTVSGNGLLY
KTRLWFKDEDQQNKLWFEVGTQVVSLKVFSKSSQTGSNQCSEYNGGCQHLCLATPGGRMC
KCAYDYINVNATHCSPEQRCPGGNRPCLDQLSCQPAEKFCNGHVDCLDHSDENCVSLKQW
SGAKVLAPTQPRSSSPPPSLLSPVTGPNTTLNINSLLMNLDAQECSQRRCSGNGHCVETS
GQIACVCSLGYIGDSCQDHILKTMQGPIVYGAAGLCAGVVVIAVMAVMVKRRKSANTRRS
SPASAKETSMTDLENKAETTPSTQTSPADADKPEEAVSSEA
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgggtggatgtttgttcctttgtgcagccttattgcagttttcagggtccttgcaagta
cttgtttcagctggaagcagtcctgtgaagtgtggcctgggttttcaacagtgcaaggat
ggctccgagtgtatcctctatagccatgtgtgtgatggagagcgtgactgccaggacggt
tcagatgaagaggactgtgactcagtgtgcaataaaggtcagttccagtgtgcccatgga
aagatgtgtatagacaaagagcaggtgtgtgatgatatacctcagtgtcaggaccgctct
gatgaactgcagtgtacgaaacaaaccgagggctgtgtccaccagtgtgacaacaagagt
cgctgcctgcctgcgaagctcctctgtgatgaagagtgggactgtctggatggcaccgac
gaggccaactgtgaggaccaagaggaagatggacatgaaacggaagacaggaccagtgtc
acctctgcacctgttggctcatcgacacccatcaagtgtcctttgggctttaaggcctgc
aaggacgactcagagtgtgtcctctacaaacacgtctgtgatggagaagcagactgcagg
gatggatcagatgagaaggagtgctcattagaatgtgaaacagaccagttccagtgtgcc
catggaaagaagtgcatagagcagagccaggtgtgtgacgggatgcatcagtgtcaggac
cgctctgatgaactgggatgtgcaaagcagattgagggctgcgctcatcagtgtgatgac
aacagccgctgcattcctaacagcttcgtctgtgatggggagagggactgctgggatggc
actgacgaggcaaactgtgcggatgaagaatgcagtgccactgattttagctgcaccagt
ggtcagtgtgtgtcggccaagatgcgttgtgacggtcacccagactgcagggatcgctca
gatgaggagggctgcacaatcgcagtggcctgcaccaccaagcaccgctgcccccagagt
aaggagtgtctggtgcaggagtggatctgtgatggagatcaagactgcaaagatggcaca
gatgagaaggattgtcccgttgctccagtgacctgtggcgagttccagtggtcgtgtaaa
tccaagacaaagtgtatccccaccggctggcggtgtgatggcatgaaggactgtggtgac
ggcagtgatgagactgaatgtggtatgatgccatgcctcccgcaccagttccaatgtggc
agccaggagtgtctggagccagtcctggtgtgcaatggcattaccaactgtgcagacggc
tcggatgagggaggcagctgccagatgaaatgtgcagatgtagacagccgctgcgctcag
gactgctacagcacaccacagggaacgcgttgtcgctgcatggcagggttcaggctcatg
gaggacgggctgacctgtgctgacattgatgagtgtgagcgctcaggtgtgtgcagtcag
gtgtgcatcaacactccaggctcattccagtgtgactgtcagccaggctacataaaggag
gcaggtggacaccactgcaaaatcaccggtgaacccttcctgatgtcatcggtccaaaca
gacctcttcttgcttggcctgcgcagtggcagcctcgatgtgctgtcctcctctgccaag
aaggccattctgtccctggactacgactggagggagcagagggtcttctgggtcagcctg
gacactgagagcatcaggtggtcctcgctggaccagaagaccacaggaacactgattaaa
ggtgtccgggctgattctgtagccgtggattggctcgggaggaacctgtactggattgat
ggtgtgaacagtcagattgttgccgtcagactggtgacaaccactatgaagtccctggac
cacagcgtcatcctggatgaagacctggatcaacctcgctctctggcactgctgccacag
aaagggctgatgttctggacagagattggtaacgtagtgaagatcgagcgtgctgggatg
gacgggtcggagaggaaggctgtggtgaactccagtttgggctggccgggtggtgtggct
gtggacgccatctctgacagagtctactggacagatgagaggctgaaatccattggctct
gcaacactggatggagaggacattcggattctgcagatgaaggagaccaccaacccgttc
tccctggcagtgttcaatgacatgctctactggtctgatgctaagaagcgagtggtgctg
gctgctcataaattctctggcaaaaaccatcaaattctccttaaaaggccgaggcaacct
tttggtgtgaagataatccatccattgctccagatggccattgacagcccctgtgagaag
atgaagtgttcccacatgtgtgtgttggccccgggaccaaaggccgtgtgcaagtgtccg
tctggccttttattggctgaggacggcctgacctgctccagcttggtcaattcagcattc
ctgctgatgctgtctccctccacagtcacacagatctacttgcagtcccgacacacagca
gcagagctgaagggctggcctgaacacctggccctgcaggtgcccagcatcaatgaggcg
gccaacatggactacagcctacgtgaccacaccctgtatttgacggatgacggcacgact
tcactcagctccttcaggctcagggactcagatttgttccctcagggccaccttctaaaa
ctcttgggtgacaccatcaccgccatggccctggactgggtgactcttaacatctactgg
agcagcaacaagcagctccgcctgcaggtcacctccatcacagccgcacacacagctgtt
cttataaaggaaggcatcggtagggtggagtccatcgccctccatccttccagtggaaga
gtttgcttcaccaacctgggcccgcaggggctgggtaccatggctactgtggaatgtgct
cacatggacggtgctgggcggagagtggtgtggaaagatgctgtccagcctgcatctgtg
accttctccagtaatggggatacaatttactgggctgacactggtttggggaccattggc
tctgtacagcttgatggatctggttacagagagttgaaggctggtgatggcctggctgcc
gtggctctgagtgatgacacactgctctggatgaccgtcagtggtaatggcttattgtac
aagaccaggctctggttcaaagatgaggaccagcagaacaagttgtggtttgaggtcggc
acacaggtggtcagcttaaaggtgttcagcaagtccagtcaaaccggttcaaaccaatgc
tcagaatacaatggcggctgccagcacttgtgcctcgccacaccgggaggtcggatgtgc
aagtgtgcctatgactacatcaatgtgaatgccacgcactgcagcccagagcagcgctgc
ccaggtggaaacagaccctgtctggatcaactctcatgccaacctgctgagaagttctgt
aatgggcatgttgactgcttagaccactcggatgagaactgtgttagtctgaagcagtgg
tctggagccaaggtccttgctcccacccagccccgcagctcctctcctccaccctccctt
ttatctccagtcactggcccgaacaccaccctgaacataaacagtctcctcatgaacctg
gatgcccaagagtgcagccaaagacgctgcagtggcaatggacactgtgtggagaccagt
ggacagattgcatgtgtgtgttcactgggctacattggtgattcctgtcaggaccatatc
ctaaagaccatgcagggtcccattgtgtacggtgcagcagggctctgtgcaggagtggtg
gttattgctgtgatggcagtgatggtgaagaggaggaagagtgccaacacgagaagatct
agcccagcatcagcgaaggaaacaagtatgactgacctggagaacaaagctgagaccacc
ccaagtacacaaacttctccagcagacgcagacaaaccagaggaagcggtgtcttctgag
gcctga
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