Acanthopagrus latus (yellowfin seabream): 119019136
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Entry
119019136 CDS
T08233
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119019136
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119019136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
119019136
NCBI-ProteinID:
XP_036953328
LinkDB
All DBs
Position
5:18921631..18937531
Genome browser
AA seq
1497 aa
AA seq
DB search
MSENLSCFPAQIFSANRYKALNYVFEATTNQKVMMNLLALPTPYFTGASDLYPHSGKLPE
VTYRTPWIRGKVISTCKLFVSGSVLNDLGEKMQTVNSLERFNVTPGEVKGDVEQISSSNP
DSLEDLDLDEYACLLKESQINDQCQESFFKLTADQMEPGNQNKNLLLPEELMVVNYLSQF
KRHLPTLKAKLSRLRTLPVADPLLSSTGDTLSEDTVFRHCASYEKPPDVTTTDVQMCANI
NEEFVKESLMKEESLLLPVVVDTVTLRKEDYTAFSGLRGCMNVFPEQLDEDTPVLDVLHR
DVSVPVDISWYEIPEESSKMNRGLIETEVAGRVMLLTEMELDVTLTSTPKTCQTQICLST
CELQKEELSPHRRRSLVSMRAQREMEAALWRAEKHPTFVVGFVLAEPQICHSAEEFYPLT
EALKLIKLEQKKFVCVGDKPQTQAETGDLEVYLCGNCAFTEKMRSEFTPSKQTEMEDFKK
LSPEHDEVSVTDILVNPTNKTQFPHLEKSEAVAFPDKASTDGTQSKSETVADSYQKTFLV
HTVNTISKEVKPAATNKDEISDKRFSDIVAVFSAHKINTEGHDCKTEQSINTPERTVSST
VKIGDSHKYPPKKDLDPLATFMILRSQQTAPVTATSQSLTSSKTAAPVNQQTPELQPPPE
QMQRSDRRPMYVSGVVSKNVTRDQKSAFQSTGQLISRPVSQPSPQNRWDSRVVQVHATDR
QQRAYYELLAFAQPCLNSARQLGLNFPVWGDFSCLAPDQTHFLLKQQENALCRVHGQSAE
LVRDQELFFNQAALIHMLVTFKELLLKCNLSTALEYLKQAAEASTEPSLKQLLRRLQIIL
DLSHKNLESNLKLQQLQQLLAVWLHSRKEQDTVDKILVVISVDSEDSRSIIIKSLSQVTG
TPVTAVRPEKDKNKLNGASVVSSIRDSVCVVVYEQHVGPDFPWSCFSLVVEYDHPGQSPW
AAVCRERSISHLTFDTIISDTEKEKASWRLEDNVPYVLFVTEGLPNCPLLLQTLESGFNI
TMLERSHCPSLQMLGGTHHYTVITVDESTAVIIQEEDELCQERASERVVMRLTALSLQYN
CCWLILHCPDSQGGGFSTESFSNLVLVYSSLVLFSMKSEGLDVKVLIVSELMEIANWISR
ICFHSLMADDRDPVHYMDRDWLTVIPSKEEKLLLQFPCINPLVSQLMLRRAPSFQWLLGA
TLSQLRKLLPQVPQKVLKLFSDTTSLYTRTAEPNQPESQTVVTQTNQQNCPPSSPWSTTA
DPKHINSDRQPEPPTNTHQELFNRDHNISFLLGTDRTFCDPNSKVQNDDTDFRLDLSSSF
GKPDVHREWSWTSSDPWKEEDRGRDEVKPSGWTGRAGAVGGVVERVKDGWTPTKLNSPFK
LDSTFCYSPILQQPADSHVSTYAIVQHPDSHHISYDLSPPAEVTLWDRGQSSSYGLTSGG
TTVSANYGPKCWIGQERKRSGEAAGLVGAVLTPLKRGRLSYERVPGRSDGQTRLKLF
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaacttaagctgttttcctgctcagattttctctgctaacagatataaagca
ctcaactatgtttttgaggccaccactaatcagaaagtaatgatgaatttgctggcgctg
ccaacaccttacttcactggtgctagtgacctgtaccctcacagcggaaagctgcctgaa
gtcacctacaggacaccgtggatcagaggaaaggtgatctccacctgcaaactctttgtc
agtggttctgtgctcaatgacctgggagaaaaaatgcaaacagttaactcactagaaaga
tttaatgttactccaggtgaggttaaaggggatgtggagcagatatccagctctaaccct
gactcattggaggatctagacttggatgagtacgcttgtcttttaaaagagtcccagatc
aacgatcagtgtcaggaatcatttttcaagttgacagctgaccagatggagcctggaaat
cagaacaaaaatctcctcctgccagaagagctcatggttgtcaactacctgtcacaattt
aaaagacatttacccacactgaaagccaagctgtctaggttgaggacccttcctgtggcc
gaccctctgctgagctcaacaggagataccctctctgaggacaccgtgttcaggcactgt
gcctcgtatgagaagcctcctgatgtgaccaccactgatgtccagatgtgtgcaaacatt
aatgaggagtttgttaaggagtcactgatgaaggaagagtctctgctgttgccagttgta
gtggacacagtgactctgagaaaggaggattacactgccttttcaggcctccgtggttgt
atgaatgtctttcctgaacagctggatgaagacactccagtcctggatgtgctacataga
gatgtatcagtaccagtagatatttcctggtatgaaataccagaggagtccagcaagatg
aatagaggcctgatagagacagaagtggcaggacgtgtgatgcttctgactgaaatggag
ctggacgtgactttgacatcaactcccaaaacctgtcaaacccagatctgtctctccacg
tgtgaactccagaaggaagagttgtctccacaccgcagacggtctttggtgtcgatgaga
gctcagagagagatggaagcagcactttggagggcagagaagcatccgacctttgtggtg
ggctttgtgttggcagagcctcaaatatgtcactccgctgaagagttctaccctctgact
gaggccttgaaacttattaagttggagcaaaaaaaatttgtttgtgttggtgacaaaccg
cagactcaggcagagacaggagacctggaggtttatttgtgtggcaactgtgcgttcaca
gagaagatgagatctgagtttacccccagcaagcaaacggagatggaagacttcaaaaaa
ctgtcacctgaacatgacgaggtctcagtcacagacatcctggtgaatcctacaaacaaa
actcagttccctcacctagagaaatctgaagcagttgcttttcctgataaagcttctaca
gatggcacccaatctaaaagtgaaacagttgctgactcatatcagaaaaccttcctggtg
cacactgtcaacaccatcagtaaggaagtaaaacctgctgctaccaacaaagatgaaatt
tcagacaagaggttttcagacattgtagccgtgttttctgctcataagatcaacacagaa
ggacacgactgtaagacagagcagagcatcaacactcctgagaggactgtgtcctccaca
gtgaaaatcggagacagtcacaaatatccaccaaagaaggacctggacccactggccacc
ttcatgatactgagatctcaacagactgctccagttactgcaacatcacaaagtttaaca
agcagtaagacagcagctccggtgaaccaacaaacacctgagctgcagcctcctccagag
cagatgcaaagatcagacaggaggcctatgtatgtgagtggtgtggtgtcaaaaaatgtt
accagagatcagaaatctgcttttcagtcgacgggtcaactcatcagtcgtcctgtcagt
cagcccagccctcagaacagatgggacagcagagtggtacaagttcacgctactgacagg
cagcagcgtgcgtactatgagctgctggcctttgctcagccttgtttgaactctgccaga
cagctggggctcaacttcccggtgtggggagacttcagctgcctggccccagaccaaaca
cacttcctgctcaagcagcaggagaatgcactctgcagggtgcatggacagagcgcagag
ctggtcagagatcaggaactgtttttcaaccaggcggctttgatacacatgctggtgaca
ttcaaggagctgctgctgaagtgcaacctcagtacggcattggaatacctgaagcaggca
gctgaggcgagcacagagccaagtctgaagcagctgctcaggaggctgcagatcatcctc
gacctcagtcacaagaacctggagtccaacctcaaactgcagcagctgcaacagctgctg
gctgtatggttgcacagcaggaaagaacaggacactgtggacaaaattcttgttgtaata
tcagttgacagtgaggacagcagatctataatcattaagagcttgagccaagtgactggt
actcctgtaactgcggttcgtcctgagaaggacaagaataaactgaatggggccagtgtg
gtcagcagcatacgcgacagtgtgtgtgtggtggtgtatgagcagcatgtaggccctgac
ttcccctggagctgtttctccctggtggtggagtatgatcatccaggccagtcaccatgg
gcggcagtctgcagggagaggagcatcagtcaccttaccttcgacacaatcatatccgac
actgagaaggaaaaggcctcttggcgcctggaggacaatgtgccatatgtcttgtttgtg
acagaggggcttcccaactgtccactgctgctacaaacactcgagtcagggtttaacata
actatgctggagaggagccactgtccatccttgcagatgctcggagggacccatcactac
actgtgatcactgtggatgaaagcactgctgtcatcattcaggaggaggatgaactgtgt
caggagcgagccagtgaaagagtagtgatgaggctgactgctctctctttgcaatataac
tgctgttggctcatcctgcactgcccagacagccagggtggaggattttccactgaatcc
ttcagcaacttggtgctggtctattcgtctcttgttcttttcagcatgaagtcagagggt
ctagatgttaaggtgctgattgtgtctgagttgatggaaatagccaattggatcagtcgc
atctgcttccacagcctgatggctgatgacagggaccctgtccattacatggacagagac
tggctgactgtgatcccctcaaaggaggaaaagttactactccagttcccatgtatcaac
cctctggttagtcagctaatgctgaggagagcaccgtccttccagtggctccttggggcc
actctatctcagctgagaaagcttctccctcaggtgccacagaaagtcctcaagctgttc
agtgacaccacctcactgtacacacggaccgcagaaccaaaccagccagagtctcagacg
gttgtcactcagacaaaccaacaaaactgcccaccgagcagtccatggagcaccactgct
gacccaaagcacataaactctgaccgtcaaccagaaccccccaccaacacccaccaggaa
ctgttcaatagagaccacaacatcagcttcctgcttggaactgatcgcaccttctgtgat
ccaaactcgaaggtgcagaatgatgacacagatttcagacttgacttgagttcctccttt
ggcaagccagatgttcaccgcgagtggagctggaccagcagtgatccatggaaagaggag
gacagaggcagagatgaggtgaagccttctggatggacaggcagagctggagcagtgggg
ggagttgttgagagagtaaaggatgggtggacaccaacaaagctgaacagtcctttcaag
ctggactccacgttttgctacagccccatcctgcaacagccagccgacagtcacgtgtca
acatacgctatagtccagcacccagatagccaccacatttcctacgatctgagccctcct
gcagaggtcacgctgtgggatcgagggcagagcagcagctacggccttaccagtggaggg
acgacagtttcagccaactatggccccaaatgctggataggccaagagaggaagaggagt
ggtgaggctgcaggtttggttggtgcagtgttgacaccactgaagaggggcaggttaagc
tatgagagggtgccgggcagaagtgacggacagacaaggcttaaattgttttag
DBGET
integrated database retrieval system
