Acanthopagrus latus (yellowfin seabream): 119019151
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Entry
119019151 CDS
T08233
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119019151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119019151
Membrane trafficking [BR:
alat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119019151
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119019151
RAVE complex
119019151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
119019151
NCBI-ProteinID:
XP_036953370
LinkDB
All DBs
Position
5:22221903..22278175
Genome browser
AA seq
3113 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHPDTKDTSLTKVNCQWQKTGQFVLDSMVRNLAW
HPTGSTLLTGSSSLQLWSNVDGVEDEVEEEGKQTEMTIRDAHSAWRCIWQSKTASPVSLM
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSGVSRLFTPPEPGIGVQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSGHHNNHSGGPHGD
TLRCAGTAKKNNCNGKTQGRTTQEFNFPESLHASFSRVGPLPSLTGCLPHNQNQHYNHKK
ISSSMPHANALCHFHIAASINPATDIPLLPSISSLNAVDDEEPGGPFTVHWLNNKELHFT
LAMEVFLQQLRGSLEQQSECSQEEPEDEENFDDEDSCSRPSDPQGPEAVELPLAAVKHQV
DILLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDA
ISLSHSVVMYACNKNVDLAIQHGRQRPPGSTLPQTKSALISYGGQGKAAPSSSLRLSIFT
PNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLT
TSHHNALRTPEVDNILAPPDAWHSGFPNLASLPRGRPSRVSLGAVSQDPNAIYSELILWR
VDPVGPLSLSGGVSELARINSLHASAFSNVAWLPTLIPSSCLGVYCNSPSACFVASDGHS
LRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDTITCFQGKETQL
LHVFEEDLILGSERAESTQEPPDSPHPPSSEPAFSARFFLVVVELTPTGRSLLHMWHLHL
AARPVTMEETMTEKEPTTASSMNSSQFSFDTFGSPMAPKSKPCTSNLQSACRLSLTTRRL
YSQEMSLPEGVEAISVTPSAGHLSASCSLPAGLVPYLIATSCSDGKVRFWRCNVTATKPF
SMDDLVYQWEEWPMLVEETVPNSSVVSVQGRPIEVSCCHAGRIAVAYRQMPNVPLNSTPY
LNSHRLTSPPTLTSSPHVHYNTRLTPTLTIQHSPNHTPSPSPANTREPLVHIAIFQCEST
GGSQWILEQTIVLDSTDPTANYDIGNSTTGNANVPGNTDFSIPYENCQGSSSKTLVHLDW
VSQENGSHVLTVGIGTKIYMYGRLSGKPPELCLSSDASRDQSLSRLVLLRSVDLVSSVEG
SLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPPKPSVTVAQDTDISSSISSIVSAVR
QSQEEGFSSGAPMSSLAPPKRALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLF
PTLPQYHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSTINPEKRIRSRTISAG
GSTARDRKMFSKAENSTPDYTEISSIPPLPLYALLAADEDTSPNPDKVGSVSGDSGHGSS
HTDAYDELFQTPSMADLDPLDNDQEETGNKVIDLSQYSPTYFGPEHAQVLSSHLLSSSLP
GLTRMEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPP
AHRAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKL
RRCIEKVARASLLINNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTDFFRNNFSEDRWR
KAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVISRLYESEFETS
STYKKILQRHVLGQDKQIHAHQDSFLRSMAHWVLEDYSRALDTLLEQPSNSTGSGSAASK
CESGYSPVSPCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERRL
FFTAAYAHLQAGCPMLALEVLSKMPKVHKHSKLLNQNNADVATDLSVGSKNGQTSDWSQP
ALNGYESDGNSLSNSQSDSVLSFDWSQPSLTLPDESLELKWDSDKDEDEEDDEDEEEHKD
GKSGRTADSSSVFQDTQDATSPLMEMVTGEESDNSSDFLEPSNDILAAQLKFTACLKIMT
NELRTLSTGYELDGGKLRYQLYQWLEREVVALQRCCSYKPCLPELCIQGETPVSGLVEEE
QPGSPRVDSQRSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDS
IQSAVTPCCPQTSIPLLMACTANVKTVVANPMVYLTNLTHDILQTINALHSPPHPDVVNN
EIYVLHTLAASLSACIYQCLCEHTHSHVNQFTGIVYQSVLLSQKQPVRTVSMDESVQPNT
SPAQWPGIASLIRLLSSAGEESQPGLAVLLCEILTAVYLSLFVHGLATHSSNELFRIVAH
PLNSKLWVTVFGGGARIPVIEKPNSPMRTPPPASPSGSDRKSRRFRLLSSRSGSKEESGI
EREGPSSPRPVPVVEQEATSIFKERFVPPDLSIWDYFIAKPSLPPSESRIEYDSEESQGS
EDEEEGDDEYEYAFDPNSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDL
PVGSPLCHTVLKTLQRWEQVLQKRLEIFGGPPSKYICTHLQDETTSPGPALLRHKALFEP
SNTPFRTSHSSALPVKRLWQFLVKQEEVQETFIRHIFTKKRDPNESGEDQTDNMKCSGME
ETGNHQTESDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILAT
QILTWIDDDEAETKGVGGDDFLVVHARDDFAAIHGSTPYTHSSPGTPINMPWLGGVQTGR
GASVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIR
FNHQGNKFGIVDSDGGLSLWQTNTSGNAPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLS
TDNRNVCLWDTLVTPANSLVHTFCCHESGATVLAMAPRQQLLITGGRKGWISILELPHRH
QRQSFQAHDSSLKALAVDPTEDCFISGSSEGNIRVWSLATQCPLYTFPSEHARQSLFRNL
GTGVMQIEVGPTNHIFSCGADGTMKMRLLPNRYSVVNNNNNHGNLKNDVKFII
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggggccgtcaaccctggagacaattgtttctctgta
ggcagcgtcaacaatgtgccattcacggcctacgcgtcagggtgtgacgtggtgattttg
ggcagtgactttgagcgactgcagatcatcccaggggccaaacatggaaacattcaggtc
ggctgtgtcgactgctcactgcagggtggacagattgcagcttcctatggaagcattgtg
tgcgtctttgagcctgttcagcacccggatacaaaagacacatcactgactaaggtcaac
tgccaatggcagaagactggtcaatttgtattagattctatggtgcggaacctggcctgg
caccccacaggcagcactctcttaactggttctagtagcctccagttgtggtctaatgtt
gatggagtggaagatgaggttgaagaagagggaaaacagacagaaatgaccataagagac
gctcattctgcctggaggtgcatctggcagagcaagacggcctctcctgtcagtttaatg
aaattctctcctgatggggaattctttgctactgctggacaggatgactgccttgtaaag
gtctggtacagcacaagcaagtggaagtcaggtgtctccagactctttacacctcctgag
cccggcattggtgttcagggagagctggccttttcctttgtctacctggcccatccccgc
tctgttaccggcttctcgtggaggaagactagcaagtacatgccacgaggtgctgtgtgt
aacgttctgctcacctgctgtaaggacagcgtgtgccggctctgggcagagacgttgttg
cctggtgacagcctcctgtccggtcaccataacaaccacagtggtggtccacatggtgac
acactcagatgtgcaggcactgctaagaaaaacaactgcaatgggaagacgcaaggaaga
acaacacaggaatttaatttcccggaatcattgcacgcctccttttctcgggttgggcca
ctgccctctctgactggctgcctgcctcacaatcagaatcaacactacaaccacaaaaag
atcagtagcagcatgccccatgccaatgctctctgccacttccacattgctgccagcatc
aaccctgcaacagacattcctctgctgccctccatctcctctctgaatgctgtggatgat
gaggaacctggaggtccttttactgtccactggctcaacaacaaagagctccatttcact
ttagccatggaagtcttcttgcagcagctccgaggcagcttggagcaacagagcgaatgc
tcccaggaagagcctgaagatgaggagaactttgatgatgaagattcttgcagcaggcca
agtgacccccaaggacctgaggctgtggagcttcctctggcagcagtgaagcaccaagtg
gacatcctcttagaggagtggaacaaaggcgcagacatgttgttcagtatccatcccatg
gacggctctctgttagtctggcatgtggactggttagatgaataccagccgggcatgttc
agacaagctcaggtatcatttgtgtcccgtatacctgtcgcgttccccacaggcgatgcc
atctccctcagccacagtgtggtcatgtacgcctgcaacaagaatgtggatctggctatt
caacatggcaggcagcgaccgcctgggagcacgctgcctcaaactaaatctgctctaata
agctacggaggtcaaggaaaggctgcacccagcagtagtcttcgactgagcatcttcacc
cccaacgtcctcatgatctccaaacacgccgacggctccctgaaccagtgggcagtcagc
ttcgcagaggactctgctttctctactgtgctcagtgtctctcacaagtcacggtactgt
ggccaccgcttccacctcaatgacctggcctgtcactcgttactgcctctcctcctcacc
acctcacaccacaacgccctgaggacaccagaggtagacaacatccttgctcccccagat
gcctggcactctggtttccctaatttagcatctctgccacgtggacgtcccagtcgggtg
tcactcggtgcggtttcccaggatcccaatgcgatctacagcgagctgatcttatggaga
gtagatcctgttggcccactgtctttgtcaggcggtgtctctgagcttgctcgcatcaat
tctctccatgcatcagcattttctaatgtagcctggctgcccacgctcattcctagcagc
tgtttaggtgtgtactgtaactctcccagcgcttgctttgtggccagtgatggccactca
ctcagactgtatcaagctgttattgaagctaagaaactcctgagtgagctctccaaccct
gagatatcaaaatatgttggggaggtgttcaacatcattagtcagcaatccacagcaaaa
ccaggctgtattatagagctggataccattacctgctttcaggggaaggagacccagctc
ctgcatgtttttgaggaggatctgatccttggtagtgagagagcagagagcacacaggaa
cctcctgattcccctcacccaccctctagcgagccggccttctcggcacgttttttcctt
gtggtggtcgaattgacaccaacaggtcgctcgcttctccacatgtggcatctccatctt
gctgctcgacccgtcaccatggaagagaccatgacggagaaggaacccaccactgcctct
tccatgaacagctctcagtttagctttgacacattcggctctccgatggctcctaagagt
aaaccctgcacttccaatctgcagagtgcctgtcgtctcagcctcacaacacgcaggcta
tacagccaagagatgtctttaccagaaggggtggaagcaatcagtgtaacaccctcagca
ggtcacctaagtgcgtcctgttctctgccagctggtcttgtgccttacctcatcgctact
tcctgttctgatggaaaggtacgtttctggaggtgtaatgtcactgcgacaaagcctttc
agtatggacgacttggtgtaccaatgggaggagtggcctatgctggtggaggagacagtt
cccaacagcagcgtagtaagtgtacagggtcgtcccatagaggtcagctgctgtcatgct
ggacggattgcagtagcttacaggcagatgccaaacgtacctctgaactcaacaccgtat
ctgaactctcacagactgacttctcctcccaccttgacttcttcccctcatgtgcactac
aacacccgcttgaccccaaccctgactatacagcatagcccaaatcacactccaagcccc
agcccagcaaacaccagagaaccactggtgcacattgccatcttccagtgtgagtctact
ggtggttcacagtggattctagagcagaccatagtactggacagcacagatcccacagct
aactatgatatcggtaatagcacaactggaaatgccaatgtcccaggtaacacggacttt
tctataccttacgagaactgtcaaggttcttctagtaagacccttgttcatttggactgg
gtctcccaagagaatgggtcacatgttctgactgttggtatcggcacaaagatttatatg
tatggtcgtctctctgggaaaccgccggaactctgtctgtcatctgatgccagcagagac
cagagcctgtctcgcctggttctgcttcgatcagttgatctggtctcctctgttgagggc
tctttacccattccagtctccctctcctgggtacgagacggcatcttggtagtaggcatg
gactgtgagatgcatgtctactcccagtggcagcccccagcaccacccaaacccagtgtc
acagttgcccaggacacagacatcagcagcagcatctcctcaatagtctcagctgtcaga
cagagccaggaggagggtttcagctctggggcccccatgtcatcacttgcccctcccaaa
agggctctgaccagatcgatgatgagcctggctcagaagctcagtgggaagagaacagct
tatgacctgcctgtagagatggaggactctgggctttttgaagcagctcaccaactcttt
cccactctgccccagtatcatcctgtacagctactggagctcatggatcttgggaaggtt
caccgagccaaagccatcctctcccacctggtgaaatgcatcgcaggagaaattgtggct
cttaaagacagcaccatcaatccagagaaacgcattcgctctcgaaccatcagcgctgga
ggcagcacagccagggaccggaagatgttcagcaaagcagagaactccacccccgactac
acagagataagctccatccctcctctgcctctgtacgcgcttctggcagctgatgaggat
acgtcaccaaaccctgataaagtgggcagtgtgagtggagacagtgggcacggttccagt
cacactgacgcttatgatgagctctttcaaacacccagcatggcggacttagaccccctg
gacaatgatcaagaggaaaccgggaacaaggtcattgacttgtcccagtacagtccaaca
tactttggtcctgaacatgcccaggttctgtccagtcacctcctgagttccagtttgcct
ggcttaacccgtatggagcagatgtcactcatggcactggctgacaccatcgctactaca
agcacagacctcaaggacagccagggcaagagcaaaggtggagaaactctggatgagtgt
ggtctgaagtttttgctggctgtcagactgcatacctttctctctacctccctgcctcca
gcacaccgagcacagcttctgcggcaaggcttgtccacatgtcattatgcctgggccttc
cactctgaagctgaggaggagcttctgaacatgctgcctgctctgcagaagggagagccc
acctggcctgagctgcgctccatgggtgtgggctggtggctgcgcagcaccaacaagcta
cgcaggtgtattgagaaggttgccagggcgtctttactgataaacaacgatcctctggat
gcagctatattttaccttgcattgaaaaagaaggcagtggtctggggattgtacaggtct
cagaagaatgccaaaatgacagacttcttccgcaacaacttcagcgaggatcggtggagg
aaagcagcactcaaaaatgccttttctctgttgggaaagcagaggttccagcactctgcc
gccttcttccttctagctggctcccttaaggatgctgtggaggtgtgtatagagaaaatg
caggacctccagctggccctggtgatctccagattgtatgagtctgagtttgagacgtca
tccacctacaaaaagatcctccagagacatgttctaggacaagacaaacagattcacgcc
caccaggactccttcctgcggagcatggctcactgggtcctggaggactacagcagggca
ttggacactctactcgaacagccttctaatagcactggctctgggtcggctgctagcaag
tgcgagtctggttactctcccgtgtctccatgtaatcctgaggttttcaacttttacacc
taccttcgcacccacccactcctccttcgccgccattttggctcgtcagacaaggctaaa
gttggccttactgctgagggtcgcagggctgactctattagcctggaggagagaagactg
tttttcacagctgcatatgcacatttgcaagctggctgccccatgctagctctcgaggtc
ctctccaagatgcccaaagtccacaaacattccaaactccttaaccagaacaatgcagac
gtcgccactgatctgagtgttggcagcaaaaatggacaaacatcagattggtctcagcca
gcgcttaacggctatgagtctgatggaaacagcttatccaacagccagtcagattcagtg
ttaagttttgactggagccagccatcactgacactccctgacgagtccctggagctgaag
tgggacagtgacaaagatgaagatgaggaagatgatgaggatgaggaagaacacaaagat
gggaagagtggtagaactgcagacagcagcagcgtgttccaggacacacaggatgccacg
tcgccactaatggagatggtgacaggagaggaaagtgacaacagcagtgacttcctagaa
ccatctaatgacatccttgctgctcagctaaagttcactgcctgcttgaagattatgacc
aatgagctgaggacgctgtccacaggatatgaactggatggagggaaactacgttaccag
ctctatcagtggttagagagagaggtggtggctctccagcgttgctgcagctacaagcca
tgcttgccagagctgtgcatccagggtgagacccctgtttctgggttggtggaggaggaa
cagcctgggagtcctcgtgttgacagccagaggagcaggagacattggctacagagtaac
cagcccttactgaggatgtttctgagctactgcagcttacacggttcccatggtggagga
ctggcctctgtacgcatggagctcatattgttgctacaagagtctcaccaggatgactcc
atccagtcagcagtgacgccatgttgtccgcaaacctccatcccacttctgatggcttgc
acagccaacgtcaagacagtggtggccaatcccatggtctacctgaccaacctgactcat
gacatcttgcagaccattaatgcgctccactctcctcctcatcccgatgttgtcaacaat
gagatttatgtgttgcacacactggctgcctccttatcagcctgtatatatcagtgtctg
tgtgaacacacccacagccatgtgaaccagttcacaggaatcgtgtatcagagtgtgttg
ctgtctcagaagcagcccgtcagaactgtcagcatggatgagtctgttcagcccaacacc
tcccctgcacagtggccaggtatcgcctctctgattcgcctcttgagctcagcgggcgag
gagagccagccgggcttagctgtgctgctctgtgagatcctgactgctgtctacctcagt
ctgtttgttcacggcttggccactcactccagcaacgagctgtttcgcatcgtggcccac
cccctcaacagcaagctttgggtgacggtgttcggaggaggcgcccggatccccgtcata
gagaaacccaacagcccaatgagaacacctccgccagcctcaccaagtggctcagacagg
aagtcgagacgattcaggctcctttcgtcgcgcagtggatccaaggaggagtctggcatc
gagcgggagggtccatccagtcccaggcctgtccctgtggtggagcaagaggctacctcc
atttttaaagaacgatttgttcctcctgatctcagcatttgggattactttatcgcaaag
ccttcactgccaccatcagaaagcagaattgaatatgattcggaggagagccagggcagt
gaagatgaagaagaaggcgacgatgaatatgaatatgcgtttgaccccaactctccacaa
agagaacactcaaaccacaattcatacagttggtgtttgatgcgtctggcgatggttcag
cttgtgttggtcaacctcaagtccttttacccaatggcaggatatgatctattggatctg
cccgtgggctctcctctgtgtcacactgtgctgaagacgctgcagcgctgggagcaggtg
ctgcagaaaaggctcgagatcttcgggggccccccttccaagtacatctgcacccacctc
caggatgaaacaacctcacccggtcctgccctgcttagacacaaggccctgtttgaacca
tccaacaccccgttcaggactagccactcctcagcactgccagtgaagcgtctgtggcag
tttctggtgaaacaggaagaagtgcaggagaccttcattcgacacatctttaccaagaaa
cgggacccgaatgagtcgggtgaggaccagactgacaatatgaaatgttcagggatggag
gagacaggaaaccatcagactgagtcagatctgggcagccccggaggaaaggcacgcatc
atccacaaggaatctgacattatcacagccttcgccatcaacaaggcaaatcgtaattgt
ttagtcatggcctccacccatgacattcaggagttggatgtgtcatccatcttggccaca
cagatcttgacatggatcgatgacgatgaggctgaaaccaaaggtgtcggtggtgatgac
ttcctggtggtccacgcacgcgatgactttgccgccattcacggcagcacaccatacact
cacagcagccccggcacacctatcaacatgccctggctggggggagtgcagacaggccgg
ggcgcatctgtgatgatcaagagaaacatcaacaatgtgagaagaatgacctctcatccc
acgctgccttactacctgacaggagctcaggatggtagcgtgaggatgttcgagtggggt
cactctcagcagatcatctgcttcagaagtcctggcaactccagagtcaccaggatacga
ttcaaccaccaggggaacaagttcggtatcgtagactccgatggaggtttgagcctctgg
cagaccaacacgagcgggaacgcacccaaaccatatctgactttgcagtgccacaacaag
acagctcacgactttgtctttgtgggctcctcgtccctcatcgccactgcggggctttca
acagacaacaggaacgtgtgtctgtgggacactctggtgactcctgcgaacagccttgta
cacaccttctgctgccacgagtccggagctaccgtgctcgcgatggcccccaggcagcag
ctgcttatcacaggcgggaggaagggctggatcagcatcttggagcttccccacaggcac
cagcgccagagcttccaggcccacgactcctcgctcaaagcactggctgtcgatccgacc
gaggactgcttcatcagtggatcatcagagggcaacatcagggtctggagtctggccaca
cagtgtccactctacactttccccagcgagcacgctcgccagtcgctgttcaggaacctc
ggcacgggcgtcatgcagattgaggtggggccgaccaatcacatcttctcctgcggcgcc
gacggaaccatgaagatgagactcctccccaaccgctacagtgttgtcaacaacaacaac
aaccacggcaacctcaagaacgatgtcaagttcatcatatag
DBGET
integrated database retrieval system
