Acanthopagrus latus (yellowfin seabream): 119019233
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Entry
119019233 CDS
T08233
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119019233 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alat03310
]
119019233 (rorb)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119019233 (rorb)
Nuclear receptors [BR:
alat03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119019233 (rorb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
119019233
NCBI-ProteinID:
XP_036953528
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Position
5:complement(6137584..6163573)
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AA seq
473 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGGHGNGGGVPGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQLGPNNVSMGELDRIAQNIIKSHLETCQYT
TDELQQLAWQTHSYEEVKMYQTKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSLPMTMPK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaattgaagttataccatgcaagatctgcggagacaaatcatcaggtatc
cactacggagtcattacgtgtgagggatgtaagggtttcttcagacggagtcagcagaac
aatgcatcctactcctgcccacgccagaggaactgcctcatcgacagaacaaaccgcaac
cgctgccaacactgccgcctgcagaaatgtctcgccctaggaatgtccagagatgcggta
aagttcggccgcatgtccaagaagcaacgtgacagcctgtatgcagaggtccagaagcac
caggcacgacttcaggagcagcggcagcagcagacaggcgaggcagaagctctggcgcgc
gtttactcatccagcttaaccaatggactgtccacccttaaccacgagattgggggcacc
tacgccaatggtcacgtcattgagctgccaaagggcggacacggtaatggaggcggagtc
ccaggggggtactatggcatggactccacccagccgtccccagaccagtcgggcttggac
atgtcgggcatgaagcacattaagcaggagcccgtgtacgacctgacgccagtacccaac
ctgttcagctatggaggctaccaggatagtcagctgggacccaataatgtcagcatggga
gagctggaccgtattgctcagaatatcatcaagtcccacttggagacatgtcagtacaca
acagacgagctgcagcagctagcctggcagacacactcctatgaagaggtcaagatgtac
cagaccaagccccgggacgtgctgtggcagcagtgtgccatccagattacccatgctatc
cagtatgtggtggagtttgccaagcgcatctcagggttcatggaactgtgccagaatgac
cagatcctcctgctcaagtcaggttgtttggaagtagtcttggtgcgaatgtgcagggcg
ttcaaccctctcaacaacactgtactctttgaagggaagtacggaggcatgcagatgttc
aaagctctaggttgtgatgacttagtgagcgcggtgtttgactttgccaagagtctgtgt
tcgctgcagctgacggaggaggagatcgctctgttctcagcagctgtactaatttccaca
gaccgtccgtggctgatggagcctcggaaagtacagaagctccaggagaagatctacttt
gctctgcagcacataatgcagaaaaaccacatggacgaagacgcattggctaagctcatc
agccgaatcccaacactgtccgccctgtgcacactccataccgaggagctccaggccttc
cagcagctccacccggagacagtcaatgtcctcttccctccgctctacaaagaactcttc
aaccccgaccccaactccctgcccatgaccatgcccaagtga
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