Acanthopagrus latus (yellowfin seabream): 119019294
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Entry
119019294 CDS
T08233
Symbol
si:dkey-250l23.4
Name
(RefSeq) uncharacterized protein si:dkey-250l23.4
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119019294 (si:dkey-250l23.4)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119019294 (si:dkey-250l23.4)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119019294 (si:dkey-250l23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
FYVE
ECM10
Motif
Other DBs
NCBI-GeneID:
119019294
NCBI-ProteinID:
XP_036953643
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All DBs
Position
5:complement(23465719..23474680)
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AA seq
512 aa
AA seq
DB search
MSSHVGASGVNGSSRVGGRGAEDASEDNSNNETYTPCLKALRQRSRCADPAGEGRSSGVE
QLVRPALPGRKAHKKTCNRRGWREGNQDRDEERQVVEHVGGRERGKQRQRKTQRSETHGD
GVQDAHGRGGAKNSSSSNSDIQLNSTLEGGEGSDLQRGQTCLRPHGTGFTRTIPANLNPQ
YPWPTIRSPSSALPQPNTQTRSTPSSRTAAGDLHHHSFNSSREPDPFWVDVRRGAGTGRP
SQSHHTHNQTHNPSFSSVERGEEEEEEEEDEEEEEEEEEVDVEDGEEGGSGVMEVLSQTV
TSAAVPPCVPFGERRMSKREKNRIKCLRRRQRRRERWRQSQLQESRQSSTGNPSSSSSED
DEDVSAGDREGYICAVCLDVYFSPYMCHPCNHIFCEPCLRTLAKNSPTNTPCPLCRTIIT
HVFFQKELNQTARTFFPKEYLSRKQNFQKASCAKWPLPSCRKLFRIFGGFQRQSSPMARR
QFPHGGGYRLDAMDFEDDSRGWRFDMDMSWQQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccatgtgggcgcctctggtgtcaacggctcaagcagagttgggggtcgcgga
gctgaggatgccagtgaagacaacagtaacaacgagacttacaccccgtgtttaaaggca
ctgagacagaggtcgaggtgtgcggatccagctggagaggggaggtcgagcggtgtggag
cagctggtgagacctgcccttccggggaggaaagcacacaagaagacctgcaacagaaga
ggatggagagagggaaaccaagacagggatgaagaaagacaagtcgttgaacacgtagga
ggcagggaaagagggaaacaaaggcagaggaagactcaaagaagtgagacacatggagac
ggagtccaggatgcacacggaagaggaggtgccaaaaattcatctagcagtaattctgac
atccagttaaacagcacattggaaggtggagaaggatcagacttgcaaaggggacagacc
tgtcttagaccacatggtaccggcttcacccgaaccatccccgccaatttgaacccccaa
tatccttggcccacaataaggtccccttcttctgctctccctcagcctaacacccaaaca
agatccacaccttcatccaggactgctgcaggagacctgcaccaccactccttcaactca
tccagagagccagatccattctgggtggatgtgagacgaggggcgggaaccggacgacca
tcgcaaagccaccacactcacaatcagacacacaatccatctttctccagcgtagagcgc
ggagaagaagaagaagaagaagaagaggatgaagaagaggaggaggaggaagaagaggtg
gatgtggaggatggtgaggaaggaggcagcggtgtgatggaggtgctgagtcaaaccgtg
acctcggcagccgtgccgccttgtgttccttttggggagagaaggatgagtaaaagagag
aagaacaggattaagtgtctgaggaggaggcagaggagaagggagcggtggagacagagc
caactgcaggagagccgacagagttcaacggggaacccatccagcagcagcagcgaggat
gacgaggacgtgagtgccggggacagggaaggttacatctgcgcagtgtgtttggacgtg
tacttcagtccttacatgtgtcacccctgcaaccacatcttctgtgaaccctgtctgagg
acactggctaagaacagccccaccaacaccccctgccccctctgcagaacaatcatcaca
catgtcttcttccagaaggagctaaaccaaactgcaaggacgttcttcccaaaggagtac
ctatcccggaaacagaacttccagaaagcgagctgcgcgaagtggccactgccgagctgc
agaaagcttttccgaatctttggaggcttccagaggcagtccagtcccatggccagacgc
cagttcccccacggaggaggctaccgtctggacgccatggactttgaggacgactctcgg
ggctggcgctttgacatggacatgtcctggcagcaatga
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