Acanthopagrus latus (yellowfin seabream): 119019377
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Entry
119019377 CDS
T08233
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03410
Base excision repair
alat03420
Nucleotide excision repair
alat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119019377 (rfc5)
03410 Base excision repair
119019377 (rfc5)
03420 Nucleotide excision repair
119019377 (rfc5)
03430 Mismatch repair
119019377 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119019377 (rfc5)
03036 Chromosome and associated proteins [BR:
alat03036
]
119019377 (rfc5)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119019377 (rfc5)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119019377 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
119019377 (rfc5)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119019377 (rfc5)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119019377 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
119019377 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_24
AAA_22
RuvB_N
AAA_14
ResIII
AAA_assoc_2
AAA_16
DEAD
DUF815
PhoH
AAA_7
ATPase_2
TIP49
AAA_19
AAA_5
AAA_30
AAA_2
nSTAND3
Mg_chelatase
DNAX_ATPase_lid
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
119019377
NCBI-ProteinID:
XP_036953775
LinkDB
All DBs
Position
5:complement(17701694..17707036)
Genome browser
AA seq
335 aa
AA seq
DB search
MASTNKATLQTRNLPWVEKYRPQKLDDLISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPVLSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EYVVQQESIDITPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILQLKTLKGLALHDILTEVHLLIHRVDFPPAIRIGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactaataaagcgacgttacagaccaggaatttaccatgggtagaaaaatac
cgaccacagaaacttgatgatctgatctcacacaaagatattctaagcaccatccagaag
tttatcagtgaggacaagcttccccatctcttgttctatggcccccctggaacaggaaaa
acctccaccatcctcgcctgtgccaagcagctgtacaaggacaaagagttcaactccatg
gtgttggagctgaacgcatcagatgacagaggtatcgatgttgtccgaggtccagttctt
agttttgccagcaccaggaccatcttcaagaagggcttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaaatttaca
gaaaacacgcgattctgtctgatctgcaactacctgtccaagatcatccccgccctgcag
tctcgatgcaccaggtttcgcttcggcccgctgtccccggaccagatgatccctcggctg
gagtatgtggtccagcaggagagcattgacattactccagatgggatgaaagccattgtg
accttatcgtcaggtgatatgagaagatccctcaacatactgcagagcaccagtatggcg
tacgggaaggtcacggaggacacggtgtacacctgcacaggtcaccctctccgctcagat
atagccaacatcctcgactggtccctcaacaaagacttcaccacagcatacaagcaaatc
cttcagctcaagactttgaaaggtttggccctgcatgatatcctcactgaggttcatctg
ctcatacacagagtggactttcctccagctattcggattggtctgctcatcaagctagct
gacgttgaacacaggctcgcctcaggaacagacgagaagatccagttgagctccatggtc
gcggctttccaggcagtcagggacctcgtggtcagcgaggcctcatag
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integrated database retrieval system
