Acanthopagrus latus (yellowfin seabream): 119019383
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Entry
119019383 CDS
T08233
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04142
Lysosome
alat04144
Endocytosis
alat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119019383 (cltcl1)
04142 Lysosome
119019383 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119019383 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119019383 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119019383 (cltcl1)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119019383 (cltcl1)
Exosome [BR:
alat04147
]
Exosomal proteins
Proteins found in most exosomes
119019383 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
LVIVD
RMC1_N
Motif
Other DBs
NCBI-GeneID:
119019383
NCBI-ProteinID:
XP_036953798
LinkDB
All DBs
Position
5:complement(21016083..21045758)
Genome browser
AA seq
1717 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTV
ALVTDSAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEEIFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDSERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLGRAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAALTMM
SHPTDAWKEGLFKDIIAKVANVELYYKSLSFYLDFKPLLMNDLLTILSPRLDHSRAVSFF
SKVNQLKLVKPYLRSVQSHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRNNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLEEAESQRKTEEEVTEPQPMVFGQQLMLTASSTPVAPQPAYPGYGYPAAPGYPAQPVP
AAGYNAPPATAAAGYAAQPVAAAAGYPAQPAAYGFNM
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggggtg
aacccggccaacattgggttcagctatctgaccatggagtcggacaagttcatctgcatc
agggagaaggtgggcgagcagaaccaggtggtgattgtggacatgtccgaccccaccaac
ccaatcaggaggccgatctctgccgacagtgccatcatgaaccccgccagcaaagtcatc
gccctgaaagacgccgccaagacgctgcagatcttcaacatcgagatgaagagtaaggtg
aaggctcacacgatgacagaggaggtcatgttctggaagtggatatcggtgaacactgtt
gccctggtgacggattcggctgtctaccactggagcatggagggggattcccagccaacc
aaagtgttcgaccggcacgccagtctggcgggatgtcagatcatcaactacagaactgat
gaacaacagaagtggctgctgctgatcggcatttctgcacagcaaaaccgcgtggttggg
gcgatgcagctgtattctgtcgacaggaaagtgtcccagcccatcgagggtcatgctgct
gccttcggggagttcaaagtggagggaaatgccaaaccctccaccctcttctgctttgct
gtgcgctcgcaggctgggggaaagttgcacatcattgaagtcggtcagccggctgcagga
aaccagccatttgctaagaaagcggtggatgtgtttttccctccagaggcccagacagat
tttcctgtagctatgcagattggtaacaagcatggagtcatatatttgatcacaaagtac
ggttacattcacctgtatgacctggagtctggagtgtgcatctacatgaaccgaatcagt
gcagagaccatctttgtgactgctcctcacgaagccacctcaggaatcatcggggtcaac
aagaagggacaggtcttgtcagtgtgcgtcgaagaggaaaacattgtcaactacgccacc
aacgtcctgcagaaccccgatctggccctgaggatggctgtgaggtcaaaccttgctggg
gccgaggagatatttgccaggaagttcaacaccctgttcgcccagggaagttattcagag
gctgcaaaggttgctgcatcagctcccaagggcatcctccgtacggcagagaccatccgt
aagtttcagagtgtcccggcccagccaggtcaggcctctccgctcttgcagtactttggc
attctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcccgtc
ctgcagcagggccgcaagcagctgctggagaaatggctgaaggaggacaagctggagtgc
tcagaggagctgggagacctggtgaaggcctccgatcccaccctcgctcttagtgtgtac
ctcagagctaacgtccccaacaaggtcatccagtgcttcgccgagactggccaatttcaa
aagatagtgctatatgctaaaaaggtgggctacacccccgactgggtgttcttgctgaga
aatgtgatgcgagtcaatccagaccagggcctgcagtttgcccagatgctggtccaggac
gaggagccgctggccaacatcaaccagatcgtagatgtgttcatggagggaaacctgatc
cagcagtgcacctccttcctgttggatgctctaaagaacaaccgacccgccgaaggacac
ctacagacacgtctgcttgagatgaacctcatacacgcgccccaggtagcagatgccatc
ctggggaaccagatgttcacccactatgaccgtgcgcacgtagctcagctgtgtgagaag
gcgggtctgctgcagagagctctcgaacactacaccgatctgtatgacatcaaacgagcc
gtggtgcacacgcatctgctcaaccctgagtggctggtgaacttctttggctctttgtca
gtagaagactccttggagtgtttaagggccatgctgtcggccaacattaggcagaacctg
cagctgtgtgtccaggtagcgtctaagtatcacgagcagctggggactcagtcattagtg
gagctctttgagtccttcaagagttatgagggcttgttttacttccttgggtcgattgtg
aatttcagccaggagcctgatgttcattttaagtacatccaggccgcctgtaaaacgggc
cagatcaaagaagtggagagaatctgtcgagagagcaactgctacgactcggagagggtg
aaaaacttcctcaaggaggccaagctaacggaccagcttcctcttatcatcgtgtgtgac
cgctttgacttcgtccatgacctggtgctctatctctaccgcaacaatctacagaagtac
atcgaaatctacgtacagaaagtgaaccccagtcgtttaccggtggtgataggtggcctg
ttggatgtggactgtgccgaggacgtcattaagaacctgatcatggtggtcagagggcag
ttttccactgatgagctggtggaggaggtggagaagaggaacaggctgaaacttctgttg
ccatggctggagtctcgtattcatgaaggatgcgaggagccggctacccacaatgcactg
gccaagatctacatcgacagcaacaacacacctgagcgcttcctgaaggagaacccattc
tacgacagcgccgtggttggaaagtactgcgagaagagagacccccacttggcctgtgtg
gcttacgagagagggcagtgcgacctggaactcatcaaagtgtgcaatgagaactcgtta
ttcaagagtgaggctcgatacctggtacgacggaaagacccagagctttgggcgaacgtg
ttagaagaaaacaatcccttcagaagacaactcatcgaccaggtggtgcagacagccctg
tcagagacccaggacccggaggaagtgtcggtcacagtcaaggccttcatgaccgcagac
ctgcccaatgagctgattgagctgctggagaaaatcgtgcttgataactctgtcttcagc
gagcacagaaacctgcagaaccttctgattttgacggccatcaaggccgaccgcacacgt
gtgatggagtacattaacaggctagacaactatgatgctccggacatcgctaatatcgcc
atcagcaacgagctctttgaagaagcgtttgccattttcaagaagtttgacgtcaacacc
tccgccatacaggtactgatagagcacatagggaacttggaccgtgcctatgagtttgca
gagcgctgtaatgaacccgccgtgtggagccagttaggcagagctcagctgcaaagagac
ctggtcaaggaggccattgactcgtatattaaagccgttgacccgtcagcgtacatggag
gtggtcaacgccgccagcaagaacaataactgggaagacttggttaaattcctccagatg
gctcgaaagaaagcgagggagtcgtacgtggagacggagctgatctttgctttagctaaa
acgaaccgtctggctgagctggaagagtttgtcagcgggcccaacaatgcgcacatacag
caggtgggcgatagatgttacgaggaggggatgtatgaagcagccaagctcttgtacaac
aatgtgtccaactttgcacgccttgcatcaacacttgtccacctcggagagtaccaggcg
gctgtggacagcgccaggaaagccaacagcacacggacgtggaaggaggtgtgttttgca
tgtgtggatggtgaggagttccgtctggcacaaatctgtggccttcacatagtgatccac
gccgacgagctggaggacctgatcagctactatcaggaccgcgggtactttgaggagctc
atcgctctgctggaggctgcgctgggactggagcgcgctcacatgggcatgttcaccgag
ctcgccatcctctactccaagttcaaacctcagaagatgagggagcacctggagctcttc
tggtccagagtcaacatcccaaaggtcctccgtgcggcagagcagtctcatttatgggca
gagctggttttcctttacgataaatatgaggagtatgacaacgccgccctcacaatgatg
tctcatccaacagacgcctggaaagaagggctcttcaaagacattattgctaaggtcgct
aatgtggagctgtactataaatctctttccttctacctggatttcaaacccctcttaatg
aacgacctgctgaccattctgtctccgcggctcgaccacagccgagcggtctcctttttc
agcaaggtgaatcagctgaagttggtcaaaccctacctgaggtcggtccagagtcataac
aacaagtccgtcaacgaagcgctcaacaacctgctgacagaggaggaagactaccagggc
ctgagagcgtccatcgatgcctatgacaactttgataccattggcctggctcagaggtta
gagaaacacgaactgattgagttcagacgtatcgctgcttacctgtacaagggcaacaac
cgctggagacagagtgtggagctctgcaagaaggacaaactctacaaggacgccatgctg
tacgctgcagagtcaaaggatgccgagctggcagagactctgctccagtggttcctggag
gagggcaggaaggagtgcttcgccgcctgcctgttcgcctcctatgacctgctgcaccct
gacgtggtgctggagctggcctggaggaacaacatcatggactttgccatgccgtacttc
atccaggtcatgagagagtacctcacaaaggttgatgagtttgcagcgaaggtgacggtg
gacaaactagaggaggcagaaagccaaaggaaaactgaagaggaggtgacggagcctcag
ccgatggtgtttggtcagcaattgatgttgacagcctcttctaccccagtggctccccag
ccagcgtacccgggctatggctaccctgctgccccgggctaccctgctcagcctgtcccc
gccgcaggatacaatgccccgcccgccactgctgctgcgggatacgctgctcagcctgtt
gctgccgccgcgggataccctgctcagcctgccgcatacggcttcaatatgtag
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integrated database retrieval system
