Acanthopagrus latus (yellowfin seabream): 119019466
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Entry
119019466 CDS
T08233
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119019466
03041 Spliceosome [BR:
alat03041
]
119019466
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119019466
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119019466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
119019466
NCBI-ProteinID:
XP_036953977
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All DBs
Position
5:11554157..11563932
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AA seq
386 aa
AA seq
DB search
MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKT
TYENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPMPQQNKMSFPAAQ
PYGQWGQWYGNGPQISQYVPNGWQVPTYNVYSQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatcaacccagaaccttgtatgtggggaatctgtccagggatgtcaccgag
ccccttattctgcaggtcttcacacagataggaccctgcaagagctgtaaaatgatagtt
gatacggctggaaatgatccgtactgctttgtggagttctatgaccacaggcatgctgct
gcctcattggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtcaactgg
gccacaacgccaaccagccagaaaaaagacacaagtaatcattttcatgtcttcgttgga
gacctaagcccagaaataactacagaagacgtcaaagctgccttcggtccgtttggcagg
atatcagatgctcgtgttgtgaaggatatggctacagggaaatctaaaggctatggcttt
gtgtctttcttcaacaaatgggacgcagagaatgccattcagcagatggggggtcagtgg
ttaggaggcagacagattcgaactaactgggccacaagaaagcctcctgctccaaagacc
acctatgaaaataactccaagcacctatcctttgatgaagtagtgaatcagtccagcccc
agtaactgcactgtgtattgtggcggagttagcacaggactgacagagcaactgatgaga
cagaccttctctccctttggacaaatcatggaaatcagagttttcccggacaaaggctat
tcatttgtgaggtttaactcccatgagtcagcagcccatgccattgtgtcagtgaatggc
acttcaatagagggccacatagtcaaatgctactggggtaaagagaccccggacatgatg
aacccgatgcagcagatgcctatgccccagcagaacaagatgagcttccctgcagcccag
ccctatggccagtggggccaatggtacggcaatggaccccagatcagccagtacgtccca
aatgggtggcaggtccccacctacaatgtctacagccaggcttggaaccagcagggcttc
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggattgaatgggagtatgctagccaaccagcccggtatgggagcc
acaggataccccacacactga
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