Acanthopagrus latus (yellowfin seabream): 119019538
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Entry
119019538 CDS
T08233
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119019538 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119019538 (dtx1)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119019538 (dtx1)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119019538 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-ANAPC11
zf-UDP
PHD_NSD
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
119019538
NCBI-ProteinID:
XP_036954140
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All DBs
Position
5:5714465..5766613
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AA seq
642 aa
AA seq
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MARPGSGLLAPVNGLGYPPQNLARVVVWEWLNEHGRWRPYTAAVCHHIENVLKGDARGSV
VLGQVDGQLSPYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMCQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGTAGNTGATGTL
SVVRQSNTFAGTSLWSPTSASSGTNNNNISVGGGQAKAEQVQLPLSTANFPCSPVMPSLS
SAHGHHALTINGQNNLNRPGTQRISMGSARGAIPPGVPALPVKNLTGSGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGINGMRRKTKKKHLRRGKNPEDVVRR
YTEKIKVLPDEDCTICMERLVMSSGYEGILQHKGIKPELVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKTIYGEKTGTQPPGKMEYHVIPHCLPGYPDSKTIRIVYDIPAGIQTN
EHPNPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGEDNLKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtccaggatcagggctgctggcgcccgtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtctgggagtggctgaacgaacacgggcgctggaggccctac
accgcagctgtttgccaccatatcgagaacgtactgaagggggacgcccggggaagtgtg
gtgctggggcaggtggatggccagctctccccttacatcatcgacctgcagtccatgcac
cagttccgacaggacacaggcaccatgagacctgtgcagaggaacttctatgagccgtcg
tctgccccggggaaaggcgtggtgtgggagtgggagaacgacaacggctcgtggacgccg
tacgacatggagatctgcgtgaccatccagaacgcctacgagaagcagcacccctggctc
gacctgacctctctgggcttctgctacctcatcgacttcaacagcatgtgtcagaccaac
cggcagagccagcgcaagagacgcctgcggagacgcatggacctggcctacccgctcatc
atgggatcgatccctaagtcgcagtcctggcccgtgggggccagctccggccagccctgc
tcctgccagcagtgcatcctggtcaacagcacgagagccgcctcaaacgctattctagcc
tctcagcgccgtaagctctacggagggacagcgggtaacacgggcgccacgggaaccctc
agcgtggtgcgacagagcaacacctttgctggaacctccctctggtctccgacatccgcc
tcctccggcaccaacaacaataacataagtgtgggaggtgggcaagccaaagctgaacag
gtgcagttgccactgtccactgccaacttcccctgttcccccgtgatgccatctctttca
tccgcccatggccaccacgctctcaccatcaatggacagaacaacctgaaccggcccggc
acccagcgcatttccatgggcagtgccagaggagccatcccaccaggggttcctgccctc
ccggtgaagaacctgactggatctggaccggtgcacccagcactagcaggcatgacaggt
atcctgatgtgcgctgcaggtctgccggtttgcctgactcgggccccaaagcccatactg
cacccgccacccatcaacaagagcgacatgaagcctgtgccagggatcaatggcatgcgc
cgcaaaaccaagaagaagcacctgaggagaggcaaaaacccagaggatgtggtgcggcgc
tacacagagaagattaaagtgttgccagatgaggactgtaccatctgcatggagaggctg
gtcatgtcatcgggatatgaaggcatcctgcagcacaaaggcatcaagccagagctggtg
ggcaaacttggcaagtgcgggcacatgtaccatctgctgtgcctggtggccatgtacaac
aatggcaataaggatggcagtcttcagtgtcccacatgcaaaaccatctacggggagaaa
acgggcacgcagcctcctgggaagatggagtatcacgtcatcccccactgcctgcccggt
tacccagactccaagaccatccgcatcgtgtatgacattcctgccgggatccagaccaac
gagcaccccaacccggggaagaagttcagtgcgagagggttccctcgacactgctacctc
cctgacaatgacaaaggcaggaaggtcctgaagctgctgatcatggcctgggaccgacgt
ctcatcttcaccatcggcacgtccagcaccacgggcgagtcggacacagtggtgtggaac
gagattcaccacaagacagaattcggctccaacctgacaggccacggctaccccgacccc
aactacctggacaatgtcctgacagagctgtcagcccagggagtcggagaggacaaccta
aaggactga
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