Acanthopagrus latus (yellowfin seabream): 119019641
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Entry
119019641 CDS
T08233
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119019641 (hnf1a)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119019641 (hnf1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119019641
NCBI-ProteinID:
XP_036954320
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All DBs
Position
5:30053236..30059404
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AA seq
559 aa
AA seq
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MEERIEERDRVMARPSRLTALQEQLVWALLGSGLSRDVLVQAIGELERDRASAGAERAER
GDGESSEEGEMDFPPPIYRELEKLPPQEAAKLKAEVDQLLQGDPWHVAKMVKSYMQQHNL
PQREVVESTGLNQSHLSQHLNKGTPMKNQKRASLYTWYVKKQCEISQQFTNAKHGVSSGE
EPGEDSRKGRRNRFKWGPASLQILFHAYDRQKNPSKEEREGLVEECNRAECIQRGVSPSQ
LAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPYTTQASSHPTLPSSPEHGVKYSHQ
ILCDTVSSVRGGGGERVGRLVVSPIQLEPSHTLLETQNPKQVSSGGPLPPVSTLTSLHSL
SASPASSQSLIMASLPGVMSLGESSLLIGLTSTQPQTVPVINSVGGGFTTLQPISFQQQL
HASSQQPLAQQLSHMGASPFMTTMTQLPCHMYKSDSPQYHSSSLLSQAMVIADGSSLGTL
TSLAAVRQILTADPEEETDSPLQEDSLQLQPHTPVPASSESLELYPAPQTTDSHQSHLLS
ASPADISSYIPTQMVSTAQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggatagaggagagagacagagtcatggcgaggccgagccgtctgaccgcc
ctccaggagcagctggtctgggccctgctggggtccggactgtcccgggacgtcctggtc
caagccatcggggagctggagcgggacagggcgagcgccggcgctgagagggcagagagg
ggggacggagagagctccgaggagggggagatggatttcccaccgccgatataccgagag
ctggagaagcttcccccacaggaggcggccaagctgaaggctgaggtggatcagctcctg
caaggcgacccctggcacgttgcaaaaatggtgaaaagctacatgcagcagcacaacctc
cctcagagagaggtggtggagtccaccggactcaaccagtcccacctctcccagcacctc
aacaaaggcacgcccatgaagaaccagaagagagcgtctctgtacacctggtacgtcaag
aagcagtgcgagatcagccaacagtttaccaacgccaaacacggcgtgtcgtcaggggag
gagccgggagaggacagcaggaagggacgcaggaacaggttcaaatggggtccagcgtct
cttcagatcctcttccacgcctacgaccgacagaagaaccccagcaaggaggagagggag
gggttagtggaggagtgcaacagggcggagtgtatccagaggggggtgtctccctctcag
ctcgccggcctcggctccaacctggtcactgaggtccgggtgtacaactggttcgccaac
cgccgcaaagaggaggccttccgacacaaactggctctcgacacgccttacaccacccag
gcgtcctctcaccccaccctcccatcaagtcctgagcacggtgtgaaatacagccatcag
atcctgtgtgacacagtgagctcagtcagaggaggtggaggagagagagtgggtcgtctt
gtggtcagtccgatccagctggagcccagtcacacactcctcgagactcaaaaccccaaa
caggtgtccagcggcggcccactgcccccagtaagcactctgacctccctgcacagcctg
tccgcctcccccgcctcctcacagagcctcatcatggcctcgctgcccggcgtcatgagc
ctgggggagtcctcactcctcatcggtttgacctccacgcagcctcagactgtgcctgtc
atcaacagcgtggggggcgggttcaccacgctgcagccaatctccttccagcagcagcta
cacgcctcgtcacagcagccattagctcagcagctgagtcacatgggcgccagtcccttc
atgaccaccatgacacagctgccctgccacatgtacaagtcagactcacctcagtaccac
tcgtccagcctgctgtctcaggccatggtcatcgcagacggcagcagcctcgggacgctg
acgagcctcgccgccgtccggcagattctaacggcagatcctgaggaagagacagactca
cctttacaagaagactctctacagctgcagccacacacacctgtaccagcctcttcagag
agcctggagctgtatcctgctcctcagacgacggacagccatcagtctcacctgctgtca
gcttcacctgcagacatcagctcctacatccctacacagatggtgtccaccgcacagtag
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