KEGG   Acanthopagrus latus (yellowfin seabream): 119019653
Entry
119019653         CDS       T08233                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119019653 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alat03041]
    119019653 (sf3a1)
Spliceosome [BR:alat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119019653 (sf3a1)
 Complex B
    119019653 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    119019653 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 119019653
NCBI-ProteinID: XP_036954335
LinkDB
Position
5:5816578..5822202
AA seq 785 aa
MPPGPVQIVQPESNNKNDAPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQAMQQSQQLPQ
KVQSQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKREAENPREVLDQVRYRVEWA
KFQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILI
QERYEKYGESEEVEMEVESEDEDDERQDRGDGHPSQPDQDTQVQDMDEGSDDDDDGMKAP
LPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSISVPDEYLISPITGEKIPASKMQEHM
RIGLLDPRWLEQRDRSIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSK
PSEIHHPPPMPSSASILPKPSPPVTAVPRPPTSLAPPVRTTLLSAVPVLPRPPVASVVRL
GPGQVITSMPPMIPAPRINVVPMPPSAPHIMAPRPPPMVVPTAFVPAPPVPQPPSSAPAP
PVHPPPPHDDEPVSKKMKTEDNLIPEDEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLN
FTVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMSNGSVIHLALKER
GGRKK
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgccgccgggccctgttcaaattgtccagccggagtccaacaacaagaatgatgcacca
gcagaagagacccctgccaccaaacccatcgttggtatcatatatccaccccctgaggtc
cgaaacatagttgacaagacagccagctttgttgccaggaacggtcccgagtttgaagcc
agaatccgtcagaatgagatcaacaatccaaagtttaatttcctcaaccctaatgatccc
taccatgcctactaccgccacaaggtcaatgaattcaaggagggcaaggcgcaggagccg
tctgcagcaatacctaaggttatgcagcaggccatgcagcagtcccaacagcttcctcaa
aaagtacagtcacaggtgattcaagagacagttgtccccaaagaacctcctcctgagttt
gagttcattgctgatcctccatcaatttcggcgtttgatctggatgtcgtcaaactcact
gcccagtttgttgctcgcaatggccgccagtttctcacccagctcatgcagaaagaacag
aggaactaccagtttgacttcctgcggccacagcacagccttttcaactacttcaccaaa
ctggtcgagcagtatactaagattctgatccctcccaaaggcctactgaccaagctgaag
agagaggctgagaatccaagagaggttttggaccaggtgaggtaccgtgtggagtgggca
aagttccaggagcgtgagagaaagaaggaggaggaggaacgggaaaaagagagggttgct
tatgctcaaatcgactggcatgactttgtagtggtagagacagtggatttccagcccaac
gaacaaggccacttcccaccacctaccacaccggaggaacttggcgctcgtatccttatc
caggagcgctacgagaagtatggtgagagtgaggaggtggagatggaagttgagagtgag
gacgaagatgatgagcgccaggatcgcggtgatggccatccatcacagcctgatcaagat
acacaagtgcaggacatggatgagggatctgacgatgacgatgatggcatgaaggctcct
ctacctccagacaaccctatgccacctccactgcccccaactccagaccaggttattatt
cgcaaagactacgaccccaaagcttccaagcctcagccctcaatttcagttccagatgag
tacctcatctcacctattactggtgagaagatcccagccagtaagatgcaagagcacatg
cgtattggtctgctggatccacgctggctggagcaaagagaccgcagcataagagagagg
cagaccgaagatgaagtctatgctcctggtctggatattgagagcagcttgaaacaactg
gctgagaggcgtaccgatatcttcggtgtggaagagacggccatcggtaagaagattggt
gaagaggaaattcagaagccagaagagaaggttacttgggatggccactccggaagcatg
gctcgtacccagcaggcagcacaggccaacatcaccctgcaagagcagatcgaagctatt
cacaaggccaaaggactggtgggagaggatgacactaaggagaaaattggcccaagcaaa
ccaagtgaaattcatcacccgcctcccatgccctcatctgcatccattttgcccaaaccc
agtcctccagtcacagcagtgcctcgcccaccaacctctttggcacctccagtgcgcact
actctgttgtctgccgtacctgtgcttccaagaccgcctgtggcttctgtggtgcgcctt
ggaccaggacaagttataacatcaatgcctcccatgattcctgctccccgcatcaatgtg
gtccccatgccgccatcagctcctcacatcatggcccccagaccacctccaatggtcgtt
ccaactgcatttgtacctgctcctccagtaccacaacccccgagctctgctccggcacca
ccagtccacccaccaccacctcatgatgatgagccggtcagcaagaagatgaagacagag
gataaccttattccagaggacgagttccttcgtagaaataagggtcctgtggcagttaaa
gtgcaggtccccaacatgcaggacaagactgaatggaagctgaatggccaagtgcttaat
ttcaccgtcccactcacagatcaggtgtctgtcattaaagtcaagatccatgaagctaca
ggcatgccagcagggaaacagaagctacagtatgagggcattttcattaaggattccaac
tccctggcttattacaacatgagcaacggttctgtcattcacttggcactgaaggagaga
ggtggaaggaagaagtga

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