Acanthopagrus latus (yellowfin seabream): 119019676
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Entry
119019676 CDS
T08233
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119019676 (tmc1)
03037 Cilium and associated proteins [BR:
alat03037
]
119019676 (tmc1)
Transporters [BR:
alat02000
]
Other transporters
Pores ion channels [TC:
1
]
119019676 (tmc1)
Cilium and associated proteins [BR:
alat03037
]
Other cilia and associated proteins
Stereociliary proteins
119019676 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
UPF0542
Motif
Other DBs
NCBI-GeneID:
119019676
NCBI-ProteinID:
XP_036954366
LinkDB
All DBs
Position
5:complement(6340841..6351356)
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AA seq
959 aa
AA seq
DB search
MPRDSLITSESDSDKDEFSDHPEEHERERRRGKRRKGDREKKKRGHGKRRRASRSREREE
EVQARPDKRERERRGRAKSDRETGGRERDEEGQAKIKSRKVAKTKKNIKNEKTKKLDQEE
EESEDRNAKGKKKHRSAKKEEKEEDGGGRREKEKTKEVKKKKHKKVVETSSEQETSELED
DVEEDDEEKEVRPESLTPEELERLKEAVDDRKKLIQGLRGKPWPMKKKLVTLRESQQFVE
KYEGALGKGKGRKLYAYKVLMTKKWMKFQRDFENFRTACIPWEMKIKEIESHFGSSVASY
FIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEASAMDFAVLWDFGG
YAQYSVLFYGYYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGVGDD
NSFNFSWKVFTSWDYLIGNPETADNKFASITTSFKEAILEEQESCKDDNIHLTRFLRVLA
NFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPMLFDVIS
ALENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEENIVKFNITTWEASFYN
GTESENSTSLPFTVQPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLVR
FLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYL
QCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKK
RMFDVIQETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEANVELK
KKLQTQNEENKKKNKRAALKAQMDLEEARKAAEQQQNNNASLQDREADVEANHGSSQRLS
HGKNGCKPPPLVRDQEVPATRAPVPRTYHHDNHGAPGYLPSFSRQSEHRMYRVPSLQRH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagacagtctgatcacctctgagagtgacagtgacaaggatgaattttccgat
cacccagaggaacacgagagggaaagacgccgaggaaaaagaaggaagggtgacagagaa
aaaaagaagagaggacatgggaagagaagaagagcatcgagatcaagagaaagagaggag
gaagtacaagcccggcctgacaaaagagagagggagaggagggggagagcaaagagcgat
cgagaaacaggaggaagagagagagatgaggaggggcaggccaaaataaaaagtcgtaag
gtggcaaaaacaaagaagaacatcaaaaatgaaaaaacaaaaaaacttgaccaggaggag
gaagagtctgaagacagaaatgccaagggaaaaaagaaacatagaagtgccaaaaaggag
gagaaagaagaggacggaggaggacgcagagaaaaggagaaaacaaaggaagtgaagaag
aaaaagcacaagaaagtagtcgaaacaagttcagagcaggagacgagcgagctagaagac
gatgtagaggaggacgatgaagagaaagaggtgaggccggagtctctgacaccggaggag
ctggagaggctgaaggaggcagtggacgacaggaagaaactgatccaaggtctgaggggg
aaaccctggccgatgaaaaagaaactagtgacgttgcgggagtctcagcagtttgtggag
aaatatgagggcgccttggggaaaggaaaaggcaggaagctttatgcgtacaaggtcctg
atgaccaagaaatggatgaagtttcagcgagactttgaaaacttcagaacagcctgcatt
ccatgggagatgaaaatcaaggaaattgaaagtcattttggctcctcggttgcctcttac
tttatcttcctgaggtggatgtacggcatcaacatgatcttgttcggtctgacctttggt
cttgttatggtgccggaggcattaatggggcgaccttatggcagcatcccaagaaagacc
gtccccagggctgaggaggccagtgccatggactttgctgtcttatgggactttggaggc
tacgctcagtactcagtcctcttctatggttactacaacaaccagcgtgctattggctgg
ctcaagttccgtatgcctctgtcatacttcctggttggtgtaggaacggtggcctatagt
tatatggtggtcataagaacgatggcccgcaatgcaaatgaatccggggttggagatgat
aacagctttaacttcagctggaaggtgttcaccagctgggactacctgataggaaacccc
gaaactgcagacaataagtttgcttccatcaccaccagtttcaaggaggcaatactagag
gagcaagagagctgcaaggatgacaatatccatctgactcgttttctgcgtgtgctggcc
aacttcctggtgctgtgctgcttagcaggaagcggatacctcatctacttcgtagtgcgt
cgctctcagaagttcgccctggatggactggagaatcacacctggtgggagaggaatgag
gtgaacatggtgatgtcattactggggatgttctgccccatgctgtttgacgtcatcagt
gccctggagaactaccacccccgtgtcgccctgcagtggcagctgggtcgcatcttcgcc
ctcttcctgggaaatctctacaccttcatcatcgccctcatggatgagatcaatctcaaa
agggaagaagaaaatatagtgaagtttaatataactacgtgggaagccagtttttacaat
ggaacagaatcagaaaacagcactagtctacccttcactgtgcaacctgctgatgtgccc
agagggccctgctgggagaccatggtggggcaggagtttgtccgcctgatcatatctgat
accatgacaacctacatcacactgctgattggtgatttcctaagagcagtgcttgttcgt
tttctcaactactgctggtgctgggacctggaggccggatttccgtcttactctgagttt
gatgtcagtgggaacgtcctgggcctgatctttaatcaaggcatgatatggatgggtgct
ttctatgccccctgcctgcccgctctgaacgtccttcgcctccacgtgtccatgtacctg
cagtgctgggccgtcatgtgctgtaatgtccctcaggaaagggtcttcaaggcctctggc
tccaacaacttctacatggccatgttgctggtcatcctcttcttgtccactctgcctgcc
atctacaccatcgtcaccatcccgccttcctttgactgtggacctttcagtgggaaaaaa
cgcatgtttgatgtgatccaggagacgctggagtcggacttccctgcctggttcagtaaa
gtgttcagctatgcctccaaccccgggctggtgctacccttcatactgctgatggtactg
gccatttattacctgcagtccacatccaaaagctacaaagaagctaatgtggaactgaag
aaaaaactacaaacgcaaaatgaggagaacaagaagaagaacaaacgagcagcactgaag
gcacaaatggatctcgaggaggcgaggaaagctgcagagcaacagcagaacaataatgcc
tcactgcaagaccgagaagcagatgtagaggcaaaccatggcagcagtcagaggctgtct
catggtaaaaatggatgtaaacctcctcctcttgttagagaccaggaagttccagccacc
agagcccctgtccccaggacctatcaccatgacaaccacggggctcctgggtacctgccc
agtttttctcggcaaagtgaacacaggatgtaccgggtgccgagcctgcagagacactga
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