Acanthopagrus latus (yellowfin seabream): 119019772
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Entry
119019772 CDS
T08233
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119019772 (gle1)
03015 mRNA surveillance pathway
119019772 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119019772 (gle1)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119019772 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
119019772
NCBI-ProteinID:
XP_036954523
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All DBs
Position
5:complement(14621551..14630782)
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AA seq
719 aa
AA seq
DB search
MPSEKLRWETLQALKNSSKANITYDPYWSERGEDILAGCKEALSLSSHSGVILQRLNSSP
LQKSCFMGSSSGESSPGLSEEVSASVSSAGSISDINAKHTALFAARPSRTESEKALSDEA
MDGDPEADISQVSSPASLPTISLLSPKATETAGLIIKFEEGKREKAKMALKLRQEMQEKL
VAEVASSESEQLKRFEEFMELKQRQEYQTMRDMMDRETKESIGRQEKLKEEQRHRMKILN
LRLREAEQQRVREAELERQRQAEGRERLRNLNTIQEEILQLNQLLDPSSQTKADLPAASL
NSLSTRGNQLCSQVSEVVRKTAEGEFPSVDDMTVAERALHEMRALIRLMQEEVAKTQERK
KKEQEQEEEHRKQVELQAQQEAQKKAAQSAIEKAKRKGLQNSAEESTLKWYKELQESAAQ
CAQSIEQLSTTKDAQLKKLKLELQKAATIPVSQISSNSGSQLREIFDKIDKLLSGRAVVS
GGRSVSTSHHPQGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGEF
ILAHLHTKCPYAVPHYPPMKEGTTVEDYQRILGYRVHDTGVEGQDSFLKRMSGMIRLYAA
IIQLRWPYGSKQGSAPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCGHALMRQYQV
QFWKLILLLKDEYFQRIEAVTTTGQMGSVIRLKQFLETSLRNRQIDPPKGQLSSGFWRT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaaaagctacgatgggaaactttacaggcactaaaaaattcatcaaaggca
aatatcacatacgacccgtactggtcggaaaggggagaggacattctggcaggttgcaaa
gaggccctcagcttgtcatcgcactctggggtcatattgcagcgtctcaactcctcgccc
ctgcagaagtcctgcttcatgggctccagctccggagagtccagtcctggcctctctgag
gaggtgtccgcctcagtttcctctgcaggatccatctctgacatcaacgccaagcacaca
gcgctttttgcagcccggccttctaggaccgagagtgagaaggcgcttagtgatgaggcg
atggatggtgacccagaggcagatatcagccaagtttccagtcctgcatcactacccacc
atttccctgctgtcaccaaaagccacggagacggcaggcctgattataaaatttgaggag
ggaaaacgagaaaaggccaagatggcactgaaactgcggcaggaaatgcaggagaagctg
gtggcggaggtggcgagctctgagtctgagcagctgaaacgctttgaggagtttatggag
ctgaagcagaggcaggagtaccagaccatgagggacatgatggacagagaaactaaagag
agcatcggccgtcaggagaagctgaaggaagagcaacgacacagaatgaagatcctcaac
ctgcggctgagagaggccgagcagcagcgtgtgcgtgaagcagagctcgaacggcaacgg
caggctgagggcagggaacgactccgtaaccttaacaccatccaggaggagatcctgcag
ctcaaccagctgctggatccgtccagccagaccaaagctgatctcccagcagctagcctc
aactccttgagcacccgcgggaaccagctgtgctcccaggtgtctgaagtggtgcgaaag
actgcagagggagagtttcccagcgtggatgacatgaccgtggccgagcgagcccttcac
gagatgcgggcgctgatcaggctgatgcaggaggaggtcgctaagactcaagagaggaag
aaaaaggagcaagagcaggaagaggagcacaggaagcaggtggagctgcaggcacagcag
gaggcgcagaagaaggcggcgcagtcggctatagagaaggccaagaggaaagggctacaa
aacagtgctgaagagagcacgctgaaatggtacaaggagctgcaggagtcggctgctcag
tgcgctcagtccatcgaacaactcagtaccacaaaagatgctcagttaaagaagctgaag
ctggagctccagaaagctgccaccatccctgtcagtcaaatctccagcaactctggatcg
cagctccgagaaatcttcgacaagattgacaagctgctgtcagggcgggcggtagtgtcg
ggggggaggtccgtctccacctcccaccatccacagggccttgacttcgtcagctataaa
ctagctgagaagtttgtgaaacaaggagaagaggaggttgcatcccaccacgaagctgcc
tttcctattgctgtcgtggcctctggcatctgggagctgcaccctcgagtgggagagttc
atcctggcccacctgcacaccaaatgtccgtacgcagtcccacactacccgccgatgaag
gaaggcacaacagtggaagattatcagaggattcttggttaccgtgtgcacgacaccggg
gtggaaggtcaggacagtttcctgaagaggatgtctgggatgattcgtctctacgctgcc
attatccagctgaggtggccctatggctccaagcaggggtctgctcctcacggtctgaac
catggctggcgctggttggctcagatgctcaacatggagcctctggcagacatcacggct
acgctgctgttcgactttcttgaggtctgtggtcacgctttgatgaggcagtatcaggtt
cagttctggaagctcatcctgctccttaaagatgaatacttccagagaattgaagcggtg
accaccactggacagatgggctcggtcatcagactcaaacagtttctagagacgtcactg
cggaaccgccagatcgatccacccaaaggccagctgagctctgggttctggaggacgtga
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