Acanthopagrus latus (yellowfin seabream): 119019822
Help
Entry
119019822 CDS
T08233
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119019822
04121 Ubiquitin system [BR:
alat04121
]
119019822
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
119019822
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119019822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
119019822
NCBI-ProteinID:
XP_036954612
LinkDB
All DBs
Position
5:9626228..9629177
Genome browser
AA seq
682 aa
AA seq
DB search
MKRAGRRRSSVWDCFEQVGSFVRCTKCDVTLKYCSGGTSSMMSHMSRHHPSTALLEEDEK
PVICSVQCVEEESAANSDIMQVAIMSPSTNMNSNPPERDYGERKRLKRSSVWDIFIKVDD
EVHCTLCDTKLKYRSSTTSMMYHIKNKHPDTVPNDGVSLATHAEVTELISKMIEKDMLPV
SMVGGEGFRELLAYTVHNYKMPSVGDITRLIEGHFHEKMEELALQLSRVEKVALTADFWT
ALPYQRYITVFCSFITEDWLGRSAVLQTHKLPSDSLLTTDSVTERLLNTVQTWGIAGKVT
ACVHNNTQDAPSAHGCARVTWDYATCFASTLQLAVCEGLSEDLVRIIAAAGKLVKHFNHN
LLASEALEHKQVQMCLPQHKLIQSSKARWDTICDMFERLLEQRWAIKAVLSDRTITTRQE
AQNLEIEDDCWQIIENFTPVLATLKWATTVISAETEVSISNIYPITFSLIQTHLVPKEND
VEQVSEFKLKVQRSLKNHMEVDSNDLASKPALMASMLDPRHKHLSFLTPTGRLAAKVKLH
ELVSKLDVINITVGPKDEQQETLITPDISQVTVPSQIRSDTKNTMMLLLGDNYSSSYATD
SEAQVDYYLRDIAPSLDTNPLDWWKVNGPRFPKLATLARHYLCVPGVSLPSLLSEAGQTF
ATMRTRLSPEHVDMMIFVNRNA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcggggaggagacggagctctgtctgggactgctttgagcaagtggggagc
ttcgtccgctgcacgaaatgtgacgttactctcaagtactgcagcggaggcaccagctcc
atgatgagccacatgagcaggcaccatccgtccaccgcgctgctggaggaggacgagaag
ccggtgatttgctccgttcagtgcgtcgaggaggagagcgccgctaactcggacatcatg
caggttgccatcatgtcacccagcacaaacatgaacagcaacccccccgagcgggactat
ggggagaggaagcgcctgaagcgcagctctgtctgggacattttcatcaaagtggacgac
gaggttcactgcacgctgtgcgacacgaagctcaagtacaggagcagcaccaccagcatg
atgtaccacatcaagaacaagcacccggacactgtgcccaatgacggcgtgtcgctggca
acacatgcagaggtgactgagctcatctccaaaatgatagagaaggacatgcttccagtc
agcatggtcggcggggagggctttcgtgagctgctcgcatacaccgtgcataattataaa
atgccatctgttggggacatcacgcggctcattgagggccatttccacgagaagatggag
gagcttgcgctgcagctgagcagggtggagaaagtggccctcacagctgatttctggaca
gccctcccctatcagaggtacatcacagtcttctgttcgttcataacagaggactggctg
gggaggtcagctgtgctgcagacacacaagctgccctcagacagcctccttactacagac
agtgtcacagagaggctccttaacactgtgcagacttggggcattgctgggaaagtgacc
gcttgcgttcacaacaacacacaggacgccccgtcagctcacgggtgcgcccgtgtcacc
tgggactacgccacttgctttgcgagcacgttgcagctcgcagtctgtgaggggctgagc
gaggatctcgtccgtatcattgctgctgccgggaaactagtcaagcacttcaatcacaac
ttgctggcaagtgaggccttggagcacaagcaggttcagatgtgcctgccacagcacaag
cttatccagtcgagcaaagccagatgggacacaatctgcgatatgtttgaacggctactt
gagcaacggtgggcgatcaaagccgtcctctctgatcgcacgataaccaccaggcaggaa
gcccagaaccttgagattgaagatgattgctggcagattattgagaatttcacaccagtg
ctggcaacgctgaaatgggcaacaacagtcatctcagctgaaactgaggtgtccatttca
aacatctacccaatcacattcagcctcattcagacccaccttgtgccaaaagagaatgat
gttgagcaagtctctgagttcaagctcaaagttcagaggtcacttaaaaatcacatggag
gttgactctaatgacctcgcctccaaaccagctctgatggcctctatgctggaccctcgc
cacaaacatctcagcttcctgacgcccacaggaagactggctgcaaaggttaaactgcat
gagctggtctcaaaattagatgtgataaacattactgtgggcccgaaggatgaacaacag
gagaccctgatcacacctgatattagccaagtgactgtgccttcacaaatcagaagtgac
accaaaaacaccatgatgttgctcctcggagacaactacagctcctcctatgccacagac
tccgaggctcaggtagattactacttgagagacatcgccccctcgttggatacaaaccct
cttgactggtggaaggtaaatggaccaagattccccaaactggctactctggcaagacac
tatttgtgcgtacctggggtgtcactgccatccttactgtcagaggctggacaaacattt
gccacgatgcgtacaagacttagcccggagcatgttgacatgatgatctttgtaaacaga
aatgcataa
DBGET
integrated database retrieval system
