Acanthopagrus latus (yellowfin seabream): 119020099
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Entry
119020099 CDS
T08233
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03410
Base excision repair
alat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119020099 (pole)
03410 Base excision repair
119020099 (pole)
03420 Nucleotide excision repair
119020099 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119020099 (pole)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119020099 (pole)
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119020099 (pole)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
119020099 (pole)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
119020099 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
CENP-B_dimeris
APP_N
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
119020099
NCBI-ProteinID:
XP_036955100
LinkDB
All DBs
Position
5:28104347..28120327
Genome browser
AA seq
2296 aa
AA seq
DB search
MVLQNSGRYRSDRGQSGGEQDNQDDGSAMSALKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLEITPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDAYTAMLSSALSGGNVTSADDDGMLKSISDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTIFNEDDEAGLIKRWFDHVQETKPNIF
VTYNGDFFDWPFVETRATLHGLSMYREIGFQKDNQGEYKSSQAIHMDCYRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKMTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLMQRVERTMRHAIEEEEKIPLEQVTNFNEV
CDEIKNKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPSFFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHITRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPTSLSYVTRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKLPSLHDLDIRTILDWNYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKKQVARQP
LEAGQAADIEDFGMPPRPLQPAILISTKRKRVSQGEDSQVESQDVELTQSWREILGPPPP
SGKTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDGPVTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGA
TYRKVNRMLPRSNMVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
RLGCVCMVNKHVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHNFEVRAEN
DVKAIYRALQRILLNYKEERRGPTLIAMQSNWELRRLAAGMPVLEEFPVVPVHVIDEINY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMENDERGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASTIASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLISEFKRL
GSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDP
SNCGGVKGKLPSSVVHGEEEAKQKKNKRREGEEEGSDDEDEEEAEEEEEEDGDGETDEVE
ELIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKQELRRNAPGATPVKRRGGSQA
SQQALGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGS
HLPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSDDAQFRDPCNSYIL
PEVICHHCNFCRDLDLCKDPSMAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMS
YTLQDLVCNKCKGVKEANMPLYCRCAGDFDLTFPAKSFSEQITVFRNIASHYSMSFLEET
IDWLVVMSPHINQSAR
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggttctccagaacagcggaaggtaccgatcggaccgaggacaaagtggaggagagcag
gacaaccaggacgatggatccgccatgtccgccctcaagcggctggagcgcagccagttc
accgacgagatggacgctcgcttcggcttcgacaggatgaaggagccgggggagaaaacc
ggctggctgatcaacatgcaccctactgaaatcctggatgacgacaagaggatgatcagt
gctgtggattattatttcatacaggaggatggaagcaggttcaaggtggctctccccttt
aagccatatttttacattgccactaaaaagaactgcgagagagaagtcatctcatacttg
tcgaagaagtttcaaggaaaggtggcgaagctggaaattacaccgaaagaggacctggac
ctgccgaaccatctggttggcctgaagagaagctacatcaagctgtcgttcaacaccgtg
gacgacctcgtcaaggtcaagcgggagatctcgccggcggtgcgcaagaatcgagagcgg
gagcagtcgaatgacgcctacaccgccatgttatcaagtgccttatcaggtggcaacgtg
acctcagcagatgatgacgggatgttaaagagcatttcggaccagctggacaacatcgtg
gacatgagagagtacgacgtgccatatcatgtgcggttgtccatcgacctgaagatccac
gtggctcactggtataacgttcgatacagaggcagcgcctacccaccggagatcgtacgg
agagatgatctcgtggagcgaccggacccagttgttttggccttcgacatagagacgacc
aaactgccgctgaagttcccagacgcggagagcgatcagattatgatgatctcctacatg
atcgatggacaggggttcctcatcacaaaccgagagatcgtctctgagaacattgaagat
tttgagttcactcccaaacccgagtatgaagggccgttcaccattttcaacgaggatgat
gaggccgggctcattaagaggtggttcgatcacgttcaggaaacaaagccgaacatcttt
gtgacctacaatggagatttttttgactggccttttgtggagactcgtgctaccctccat
ggactgagcatgtaccgggagattggtttccagaaggacaaccagggagagtacaagtcc
agtcaagccatccacatggactgctacaggtgggtgaagagagacagctacctgccggtg
ggaagtcataatctgaaggcagcagcgaaggctaaactgggctacgacccagtggagctg
gacccagaggagatgtgccgaatggcaaccgaggagccgcagactttagccacctactct
gtgtcggacgctgtggccacatattacctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcatccccatggagcccgatgaggtgctgcgtaaaggctctggcact
ctgtgtgaagctctgctcatggtgcaggccttccacgcaaacatcatcttccccaacaag
caggagcaggtgttcaacaaaatgacagacgacggccacgtcatggactcggagacctac
gtgggcggccacgtggaggcgctggagtcgggagtgttccgcagtgacatcccctgccgt
ttcaaaatgaatccagctgcttttgacttcctgatgcaaagagtcgagagaacgatgcgt
cacgccatcgaggaagaggagaaaatccctctggagcaagtcaccaactttaacgaggtt
tgcgatgagatcaaaaataagctgacgtccctgaaggaggtcccaaacaggattgaatgc
cccctcatctaccatctggacgtgggggcgatgtaccccaatatcatcctcaccaaccgc
ctgcagccatcagcgatggttgatgaggccacttgtgctgcctgtgacttcaacaagccc
ggcgccacctgccagaggaggatggcctggcagtggagaggagaaatcatgccggccagc
cgcagtgagttccaccgcatccagcagcaactcgagtctgagaagtttccgtcgtttttc
cccaacggtccacctcgcgccttccacactctcaacagagaggagcaggccaagcatgag
aagaagcgtctggcagactactgtaagaaggcctataagaagacccacatcaccaggctg
gaggagcgagtcaccaccatctgtcagagagaaaactccttctacgtcgacaccgtgaga
gcgttcagagatcggcgttatgaatttaaaggactccacaaggtgtggaagaagaaactg
tcggcggctcaggacagcggagacgctgctgaggtgaaacgctgcaaaaacatggagatc
ctgtacgagtctcttcagctggctcacaagtgtattctcaactctttctacggctacgtc
atgaggaagggggcgcgctggtactccatggagatggccggcatcgtgtgcttcaccgga
gccaacatcatcactcaggccagagagctcattgaacaaatagggaggcctcttgagttg
gacactgatggtatctggtgtgtcctccccaacactttccctgagaactttgtggtgaaa
accagtaacgagaagaagcccaaggtgaccatctcctacccgggggccatgctgaacatc
atggtgaaggagggattcaccaacgatcagtaccacgagctggtcgaccccacgtccctt
tcgtacgtcacccgggcggagaacagcatcttcttcgaggtggacggaccgtacctggcc
atgatcctgcctgcctccaaagaggaagggaagaaactgaagaagaggtacgctgtgttc
aatgaggacggctcgctggctgagctgaagggttttgaagtgaagagaagaggagagctc
cagctcattaagattttccagtcgtcagtgtttgaggctttcctgaaagggacgactctg
gaggaggtgtacgcctctgtggccaaagtggccgactactggctggacgtcctgtacagc
aaggctgccaacatgcccgatgcggagctgtttgagctgatttctgagaatcgctcgatg
tccagaaagctggaggactacggagagcagaagtccacttccatcagcacagctaagaga
ctggctgagttcttgggagaccaaatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccgaaaacctgagggttcacccgtcaccgagagagccattcctctggccatcttc
caggccgagcccagtgtgaagaaacatttccttcgtaagtggctgaagttgcccagcctg
cacgacctggacatccgcactatccttgactggaattattacatcgagagattaggcagc
gccatccagaaaatcatcaccatccccgcagctctccaacaggtgaagaatccggtcccc
agagtgaggcatcctgactggcttcacaagaaactcctggagaaaaatgacatctacaag
cagaagaagatcagtgagctgttcaccagcgagggaaagaagcaggtggcccgtcagcct
cttgaagcgggtcaagctgcagacatagaggactttggaatgccacccagacctcttcag
cccgccatcctcatcagtaccaaacggaaacgggtttctcagggagaggacagccaggtg
gagtctcaggatgtggagctcactcagtcctggagggagatcctgggaccacctccacct
agtggaaagactcgggaggaacgtcttgtgtggctgcgctaccacaagaagaagtgggag
ctgcagctgagacaaaggaaggagagaaagaagaggaggaggctgctggacggcgaagct
caacctgttggaggaggagtcatcagagatggccccgtcaccggcctgggaagcttcctc
cgcagaacagctcgcagcatcctggacatgccgtggcagattgtgcagattgcagagacg
agtcaccctggtctgtacaagttgtgggctgtgatcgggaacgacctccactgcatgaag
ctcaacatcccccgagtcttctacgtcaatcagaaagtcccgaagcaggaggagggagcc
acgtacagaaaggtgaaccgcatgctgcctcgctccaacatggtgtactacctgtacgag
tactgtgtaccagaggacatgtaccaggagcacatcaacgagatcaacgctgacctctct
gccccagatatcgaaggggtctatgaaacacaggtgccgttgctgtttcgggcactcgtg
cggctcgggtgtgtgtgtatggtcaacaagcatgttgtgagggatctggccggcagggag
gcggacacgttcgacctggagcatctggagatgaggtccctggcccagttcagctacctg
gagcctgggagcgttcgacacatgtacctgtatcatcacagccagggtcacaaggcgctg
tttggcctgttcatcccctcgcagcgtaaagccagcatctttgtcctggacacagtcaga
agcaaccagatgcccaacctcagtaacctctacaccgctgagcgcactgctctcctggag
aagaccaccgaggagctcctgcctccggagaaacacaactttgaggtccgagctgaaaac
gatgtgaaggctatttaccgcgcactccagcgcatactgctcaactacaaggaggagcgc
cgcgggcccaccctcatcgcaatgcagtccaactgggagctgcggcggctggcagcaggg
atgccggtgcttgaggagtttcccgtcgttccagtacatgtgattgatgagatcaactat
aacgtgctggactggcaacgccacggcgccaggcgcatgatccgccactacctcaacctg
gacagctgcctgtcacaggctttcgacatggccagatattaccacttacctgtggggaac
ttacctcaggacgtgtccatcttcggctcagacttgttcctggcgagacatctacggaaa
cacaaccacctgctgtggctctcacccacagccaggcccgacctcggagggaaggaggct
gatgacagtcgtctggtgatggagaatgatgagaggggctctgtggagataaatgctcaa
ggatgctattccacagtgtgtgtggagttggacctgcagagcctggcggtgaacactatc
ctccagtcacagcatgtcaatgacatggagggcggagccagtctgggtgtcagtttcgat
gtgatccagcaggcctcgttggaagacatgatgtcaggaaaccagggagccagcaccatc
gccagctacgatgagaccgctctctgctccaataccttcaggatcttgaagagcatggtg
gttggatgggtgagagagatcacacagtaccacaacgtgtacgccgacaaccaggtgatg
cacttctaccggtggctgcgctctcccagctcgctgctctacgaccctgcgctgcaccgc
accctgcacaacatgatgaagaaggtgtttctacagttgatctcggagttcaagcgtctc
ggctccactgtggtgtacggaaactttaacaggatcatcttgtgcacaaaaaagcggagg
atagatgacgccatcggctacgtggaatacatcaccaacagcatccactccagagagatc
tttcactcgttgtccatctccttctcccggtgctgggagtttctgctgtggatggatccg
tccaactgcggcggcgtgaagggcaaactgccgtccagcgtcgtgcacggagaggaagaa
gccaaacagaaaaaaaacaaacgacgggagggagaagaggaaggcagcgatgatgaagac
gaggaggaagctgaggaggaggaagaggaggatggcgacggagagacggacgaggtggag
gagctgattgagagcaactggaacatcatgcagtatctgccccaaaccgcctcctgtcag
aaatacttcctcatgattgtctccgcctacattgcagcggtctaccacagcatgaaacag
gagctgaggcgtaacgctcctggggcaacgccagtcaagagacgtggaggcagtcaggct
tcccagcaggcactgggggacttgagtgctcttcctggaatgatctccttctcccaagaa
tacgtgtccagtgagctgacgcagaactttttcaccatcactcaaaaaatccagaagaag
gtgacgggtaccaggagcgtgacccagccgtcagagatgttccccgtcctgcctggatcc
cacctgccactcaacaacccggcactggagtttatcaaatacgtctgccaggtcctttcg
ctggatgccaacatagtgaaccaggtgaacaagctgaaaagagacctcctgcggctcgtg
gacgtcggagagttttccgatgatgctcagttccgtgacccctgtaactcctacatcctg
ccggaggtcatctgccaccactgcaatttctgtcgtgacctcgacctctgcaaggaccca
tccatggcacaagatggatctgttttgcctcagtggttctgctccaactgccaggcgcag
tacgagaccgagtccattgagatggctctggtggaagctctgcagaagaaactgatgagc
tacacactgcaggacctggtgtgtaacaaatgtaaaggagtgaaggaagcgaacatgcct
ctgtactgcagatgtgccggagactttgacctcacgttcccagccaagagcttctccgag
cagatcacggtgtttcggaacatcgcgtctcactacagcatgagcttcctggaggagacc
atcgactggttggttgttatgagcccgcacatcaaccagagcgctcgctaa
DBGET
integrated database retrieval system
