Acanthopagrus latus (yellowfin seabream): 119020143
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Entry
119020143 CDS
T08233
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119020143 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119020143 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119020143 (usp30)
04121 Ubiquitin system [BR:
alat04121
]
119020143 (usp30)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119020143 (usp30)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119020143 (usp30)
Membrane trafficking [BR:
alat04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
119020143 (usp30)
Ubiquitin system [BR:
alat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119020143 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
119020143
NCBI-ProteinID:
XP_036955180
LinkDB
All DBs
Position
5:27777143..27784327
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AA seq
502 aa
AA seq
DB search
MLWCRPESSDKLIGEFLGTGPVVRNKMIKNWGVIGGIAAAIAAGVYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLASCPSFIRWLEKFSGSPAVQSCKDNQLSTTLLQLLKAL
SSDDPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDHQPKVTHLF
DMQSLESLPDQVEKTMTCRSRAPLHPIPSPWKFQHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPMSLDQCLQHFISSETIKEVECENCTKLQQGTTVNGQLMQSQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYKHNSSAQRSQRVK
CAPSPIRPENSDDSTAKPIANGTDAEHRNNNNKPFSNGTCSSVFLHSPGVGPQLGLTYDY
SSAEYLFQLTAVLVHHGDMHSGHFVTYRRSPSSPPSTFSSQWLWVSDDSVRKASLHEVLS
SNAYMLFYERVRRPNLALRSEE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagaaagctcggataagctcattggggagtttcttggcactgga
cccgtagtcagaaacaagatgataaagaactggggtgtcattggcgggatagctgctgcg
atcgcggctggagtttacgttctgtggggcccaattacagagaggaagaagagaaagaga
ggtatggttcccggtttgttgaatttaggcaacacctgcttcctgaactcgttgcttcag
gggctggcatcgtgtccgtccttcatcagatggctggagaagttttcaggttcgcccgct
gtccagtcgtgcaaagacaaccagctgtctacgacactgcttcagcttctcaaagctctg
tccagtgacgaccctggggaggaagatgtcctggatgccggatgcctcctggatgttctc
agactgtacaggtggcacatcagttcatttgaagagcaggacgcacatgaactttttcac
gtcctgacatcttctctggaagaggagcgggaccatcaacccaaagtcactcacttattt
gacatgcagtcactagagagtctccctgatcaagttgagaaaactatgacctgcagaagt
cgagctcctctacatccaataccaagtccttggaagtttcagcatccttttcacggccgt
ttaacaagcaacatgtcatgcaagcgatgcgaacaacagagtccagtgcggtatgactca
tttgagagcctttccttgtccatccctttacctcagtggggtcgtcccatgtctctagat
cagtgtcttcagcatttcatctcctcagaaaccatcaaagaagtagagtgtgaaaactgc
accaagcttcaacaagggaccacagtaaatgggcaacttatgcaaagccagaggacgaca
tttgttaaacagctaaaactgggaaagctcccccagtgcctctgcatccacctacaaaga
ctgacgtggtccagcgaaggaacccccatcaagcgacaggagcacgtgcagttcacagag
tatctgtcaatggaccgctacaaacacaattcatccgcacagagaagtcagcgggtcaaa
tgtgctccaagtccaataaggccagaaaactcagatgattccacagcaaagccaattgct
aatggcactgatgcagaacatcgcaacaacaacaacaaacctttctccaacgggacatgt
tcgtctgtattccttcactctcctggtgttggcccacagctcggcctcacgtacgactac
agctctgcagagtaccttttccagctcacggctgtgctggttcaccacggtgacatgcac
tcaggacatttcgtcacgtaccgccgcagcccttcctcgcctccctcaaccttcagctcg
cagtggctgtgggtgtcggacgactcggtgcgaaaagccagcctgcacgaggtgctgtct
tccaacgcgtacatgctcttctacgagagagtccgaagaccgaacctcgctctgcgctcg
gaggagtga
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