Acanthopagrus latus (yellowfin seabream): 119020155
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Entry
119020155 CDS
T08233
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1 isoform X1
KO
K13129
survival motor neuron protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119020155 (smn1)
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
119020155 (smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
BUD22
TUDOR
Vma22_CCDC115
DNA_PPF
DUF5321
Motif
Other DBs
NCBI-GeneID:
119020155
NCBI-ProteinID:
XP_036955199
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All DBs
Position
5:8441306..8448830
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AA seq
283 aa
AA seq
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MANGCDDVLFVRGTGQSDDSDIWDDTALIKAYDKAVASFKTALKGEDEPQPSKKTQPGKK
RKNNKKNQSRKRTNAPPDKEWQVGDSCSAYWSEDGQLYAATISSIDENRGTCIVVFTGYG
NEEEQNLEDLLSEISEGDEEKNIKVNEVESSTEESDRSTTPNQHKQHPHSKPPKSRGHRD
PPPMWGPGFPGFPPGPPPMHSSRQGGGRRSAGHGPVPPSWPPMMPFGPPMIPPPPPMSPD
MVDDEALGSVLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgggtgcgacgacgtcttgtttgtacgaggaactggccagagtgatgattcg
gatatatgggatgacacggcattgataaaggcttatgacaaggcagttgcatcattcaag
actgccctgaagggtgaagatgagccgcagccctctaagaaaacccaaccaggaaaaaaa
cggaagaacaacaaaaagaaccagagcaggaaaagaaccaatgcaccaccagataaagag
tggcaggttggggactcctgcagtgcgtactggtcagaggacggccagctgtacgcagct
accatctcctccatagacgagaacaggggcacttgtatagtcgtttttaccggttatggc
aacgaggaggagcagaaccttgaagacttgctttcagagatttctgagggcgatgaggaa
aaaaatataaaggtaaatgaggttgagtcatcaacagaggagagtgacagatcaactaca
ccaaaccaacacaaacagcatccccacagtaaacccccgaagtccagaggccacagagat
cctcctccaatgtggggtcctggtttccccgggtttcctccaggcccgccacccatgcac
tcgtccagacaggggggaggcagacgatcagctggtcatgggccggtgcctccttcctgg
cctcccatgatgccttttggtccaccaatgatccctccacctccaccaatgagccctgac
atggtggatgatgaggccttgggcagcgtgctcatctcctggtacatgagtggataccac
acaggatactacttggggttgaaacaaggacgcaaagaagctgctaattggacgaaactg
caccacaaatga
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