KEGG   Acanthopagrus latus (yellowfin seabream): 119020225
Entry
119020225         CDS       T08233                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119020225 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alat03021]
    119020225 (taf5l)
   03036 Chromosome and associated proteins [BR:alat03036]
    119020225 (taf5l)
Transcription machinery [BR:alat03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119020225 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     119020225 (taf5l)
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     119020225 (taf5l)
    STAGA complex
     119020225 (taf5l)
    TFTC complex
     119020225 (taf5l)
    SAGA complex
     119020225 (taf5l)
    SLIK complex
     119020225 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 RMC1_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Vps41 Tricorn_2nd Beta-prop_WDR19_1st PEP5_VPS11_N WD40_like Nbas_N PROPPIN Beta-prop_IP5PC_F WD_LRWD1 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 119020225
NCBI-ProteinID: XP_036955370
LinkDB
Position
1:complement(2075235..2080771)
AA seq 600 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQTAEEMAASLTVQTESGCANIVTAA
PCQSDPQQYETQFSRLRSFLSETEISWAKEVSSILYPLFVYLHLDMVHCGLKGAVDGFYS
RFHGAFLQDSEQRATIEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRALSTHLQVEVTASRRTDYQLYGAAGGATNAPNSTSSWAGVDGAESGEGVEVP
AGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSLIHLACDVLEEEVDEEDSSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYRGHVYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRVYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHGGTPADGSSNELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgcactgagcagatccagtatgccgtggctcagtacctgaagcggagg
cagtatgtggacactgatggttccttgaagggagccaagctcttccagacagctgaggag
atggctgccagcctcacagtgcagacggagtcgggctgtgccaacattgtcacggctgcg
ccctgccagtctgacccacagcagtatgagactcagttctccaggctgcgctcttttctg
tcagaaacagaaatatcctgggcgaaggaggtgagcagcatcctctacccgctcttcgtc
tacctccacctggacatggtgcactgcggcctgaagggggcagtagatggcttttacagc
cgtttccatggtgcctttcttcaggacagtgagcagcgcgccaccatagagcagctccgc
catgttctcaccgctcaggatgtagcagccaaccccaagctgagtgccttcctggagcac
aagtatgtggttcacctaacggagccagcctacagctacctgctgcgttacctgcagagc
gaggacaacagcgccctctgcagggccctcagcacgcacctgcaggtagaggtcactgcc
tcgaggcgtacagactaccagctgtatggagctgcaggcggggctacaaacgcaccaaac
tccacctcctcctgggcgggggtggatggggcggagagcggggagggtgtcgaggtccca
gcagggatcccacagagtgaggcggccctggaggctctgcaggactgcatcaagaaagtt
cgggaaggcccccccacgctgaccaccgtgtgtttctacgccttccaccacacggagcag
atgttgaacactgcagaggtctcggccgacagccggctgctggccgccggctttgacagc
tcaacggtgaagctgtggagcctccgagccagaaagctgaaggccaaaccgcatcaggct
gatgtgtcgctcatccacctggcctgtgacgtcctggaggaggaggtggatgaagaagac
agctccggcagcgagataaagactttgcgaggtcacagcggccccgtgtttcgtaccgcc
ttcctgacagacagctccggcctcctctcctgctctgaggacacaaccatccggtactgg
gacctgggcagcttcaccaacacggctctgtaccggggccacgtctacccggtgtgggac
gtggacgtcagtccctgcagcctttacttcgccagcggctcccacgaccgcacggcccga
ctctggacgttctcccgcacctacccactgcgggtttacgccggacatctcgccgacgtc
gactgcgtcaaattccaccccaactccaactacctggccaccggctccacagacaagact
gtccgattgtggagcacccagcagggggcgtctgtgcgcctcttcactggccaccgtggc
ccagtgctgtcactcgctttctcacctaacgggaagtatttagcgtctgccggcgaggac
cagagggtgaagctctgggacttagcctcagggacgttgttcaaagacctgcggggacac
acggacagcgtcaccagcctgtcgttcagcccggacagcagcctggtggcgtcgtcgtct
atggacaactcagttcgggtgtgggacatcaggaactcccacggcgggacgccagccgac
ggctcgtccaacgagctggtgggactttacactggaaacaccagcaacgtgctgaacgtc
cagttcatggcctgcaacctgctgctggtgacaggaactgcacaagagaaggcagaacag
tag

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