KEGG   Acanthopagrus latus (yellowfin seabream): 119020286
Entry
119020286         CDS       T08233                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alat03041]
    119020286
Spliceosome [BR:alat03041]
 Complex B
  Other components
   Complex B specific factors
    119020286
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st LisH_TPL WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_VPS8 TFIIIC_delta Beta-prop_IP5PC_F Beta-prop_BBS7 Mala_s_1-like Beta-prop_WDR75_2nd VPS8_N DUF7165 PD40 Beta-prop_IFT122_2nd LisH
Other DBs
NCBI-GeneID: 119020286
NCBI-ProteinID: XP_036955434
LinkDB
Position
1:12960797..12976247
AA seq 510 aa
MAADMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKNGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLENL
LTCSYFDPREAYPKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLEQVGSMRIQQFPDQL
SPDMTIETSGTKRLLEKETFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEVW
NFNTGKISKDLKYQAQDSFMMMDEAVLCMCFSQDTDLLATGAQNGKIKVWKIQSGLCLRR
FEHAHSKGVTCLSFSKDNNQVLSASFNQTIRIHELRSGKTLKELNGHSSFVNDASFTEDG
LHIISASSDGTVKIWSTKSGECINTFKSLSRTSEVPVNNVIPLPQNPEHFVVCNHSNTVV
VMNMHGQTVKTFSSDRKEAADFVCCTLSPRGEWIYCVGEDFVLYCFNYTTGRLQKTLTVH
EKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggctgcggacatggaaccctcggatgtgatccgcctgatcatgcagtacctgaaggag
aacaacctctaccgaacgctgaccaccctacaggaggaaaccacggtgtcactcaacacg
gtggaaagcatcgacagtttcattgcagacataaagaacggccactgggactccgtcctg
ctggccatcgagtccctcaagttgcccgacaacacactcattgatctttatgagcaggtc
gtaatggagctcattgaaatgagggaggtgggagcggctcgctcgctcctcagacaaact
gaccccatgatcatgttgaagcagacgcagccagagaggtacatccacttggagaacctg
ctaacatgctcctactttgacccccgcgaggcgtacccaaaaggcagcagcaaggagaag
cggcgcagagcgatagccgaggcgctggtgagggaggtcagcgtggtgccaccttctcgc
ctcatggggctcctggaacaagtcggctctatgagaatacagcagtttccagatcagctc
tcccccgacatgaccattgagacttctggcaccaagagacttttggagaaagagaccttt
ccaacccagctgtaccgccacatcaagtttggacgacggtcacatgtggagtgcgcccgt
ttctcgcctgatggcaaatacttaatcactgggtcggtggacgggttcattgaggtgtgg
aactttaacactgggaaaatcagtaaggatctaaagtaccaggcccaggacagcttcatg
atgatggatgaagccgtgctgtgcatgtgcttcagtcaggatacagatctgctggcaact
ggagctcagaatggcaaaataaaggtgtggaagatccagagcggcttgtgcctgcgcagg
ttcgagcacgcccacagcaaaggtgtgacctgtctgagcttctccaaggacaacaaccag
gtcctcagcgcctccttcaaccaaaccatcagaatccatgaactgaggtcaggcaagaca
ctaaaggagttaaatggccattcgtcatttgtaaatgatgcatctttcactgaagatgga
cttcacatcatcagtgcttcgtctgatggcacagtcaagatttggagcacaaaatccggc
gaatgcatcaacacattcaaatctctgtccaggacatcagaagtccccgtcaacaatgtg
attcccctgccccaaaatccagagcactttgtggtttgtaaccactcgaacacggtggtc
gtcatgaacatgcatggtcagactgtgaagacattcagctcagacagaaaggaggcagcc
gactttgtgtgttgcaccctgtcaccgcgcggggagtggatctactgtgtgggcgaggac
ttcgtgctgtactgcttcaactacacgacgggaaggctgcagaaaacgctgaccgttcac
gagaaagatgtaattggtatcgctcaccacccacacgagaacctgattgccacatacagc
gaggatggcctcctgaggctatggaaaccgtga

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