Acanthopagrus latus (yellowfin seabream): 119020391
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Entry
119020391 CDS
T08233
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04110
Cell cycle
alat04218
Cellular senescence
alat04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119020391 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119020391 (rbl1)
04218 Cellular senescence
119020391 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119020391 (rbl1)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
119020391 (rbl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
DUF8338
Rb_C
Motif
Other DBs
NCBI-GeneID:
119020391
NCBI-ProteinID:
XP_036955541
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All DBs
Position
6:complement(4941846..4955127)
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AA seq
1066 aa
AA seq
DB search
MRGEESSDSESGRMEESSIRRSLETLCQELNMDEQTATEAMENFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRTAKLSLIQFFSKMRKWADMSNLSQDF
RQRMERLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRAD
GHVSADEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFEKQILKGSDEHLTELLD
PQNFIDNNKAINREYEEYVLTVGDFDERVFLEADADEEIGTPRKVVHDQPASTTAQNQLQ
QHVEKSASLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRTAPSDHLMQIF
KSCSRDPSDSILTRVKTLGQAFKEHYTRDSEEMPGSHIDFAENRLKLAEILYYKILENVI
SQETKRLHGKDMSMLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLSPFYFFKV
IEVFIRSEEGLSRDMVKHLNQIEEQILESKAWSADSALWSALQDAGNKVPTVEEVNFSSS
LDTGSGPGSGSTSAGQTHLPLVALSPIIHPRIREFRSGLGSARKDVPPSPLSVHDRYSSP
AAGSAKRRLFGDDPPTTGVTLSPMSSPAKRLTFSSTSTLRIGTQGSPATVLSFPLQAGMS
NDRTITLIPVQSCDASGTINAQFLLTSPHRTASPSRVTSAPTTSDPPTGSGRPRRTGSLA
LFFRKVYHLASVRLRDLCVKLDIPSELRGKIWTCFEHTLVHSTDLMKGRHLDQLLLCSVY
IISKITKETHTFHDIMKCYRSQPQASSHVYRSVLLRHTPREQVADENMEVDPVSGGESAE
KSNQVSGEANSSQSAEEERGDLIQFYNSVFVLKVKSFALRYATNDNRADAPPLSPFPSVR
AQPLSPRRVSQRHSLYVSPHKNSAACLTPNSYTYRINSSPSKELSDINRMIRQGCVSRKR
AFTMEGDVMMSSACDSPSKRACPENGSSPDVLLKRLQDVVSERQSH
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtcggattccgagtcggggaggatggaggagagttcaatccgg
aggagtttggagacgttgtgtcaggagctgaacatggacgagcagacagccactgaagcc
atggagaacttcactgccatatggaatacatacacactggagggagaggtggtccactgg
ttggcctgctcgctgtatgcagcctgtaggaaaggatccactcccacagtgggtaaaggg
ttgatggaaggaaactgtgtctccctcaccaggatccttcgcaccgccaaactgagtctg
atccagttcttctctaagatgaggaagtgggctgacatgtccaacctctcgcaggacttc
aggcagcgcatggagcgactggagcgcaactttgaggtttccactgtgattttccgcaag
tttgagcccatcttcatggacatgtttcaaaatccgcagggaggggaaccgccacggcag
ccgcgcagcaggaaacacaggcggcttccctgtcacatcagcgatgtgttcaagttctgc
tggactctgtttgtctacaccaaaggaaacttccgtatgatcggtgatgacctggtgaac
tcgtaccacctgctgctctgctgtctggacctggtgttcggcaacgctctgctctgtgcc
aacaggaaggacctcatcaaccccacgttccgaggtctgcctgctttgtatcgcgctgat
ggccacgtttcagcggacgagcctcctccgtgtgtgttggagaggttgtgcgagctccac
gacgggctggtggtggaggccaaaggcatcaaacagcactacttcaaaccctacatacag
aaactgttcgagaaacagatcctgaaaggcagcgatgagcatctgacagaactgttggat
ccacagaacttcattgataacaataaagccataaacagggagtatgaagagtacgtgttg
acggtgggagactttgatgagagagtgtttctggaagccgatgcagacgaggaaatcggc
actccaagaaaggtcgttcacgatcagcctgcctctacgaccgctcagaaccagctgcag
caacatgttgagaagtctgcctctctcgccccctccacccctctgacaggacgagtctac
ctgaaggagaaggacctgctcgtcacgcccgtctcctccgcgacgcagagcgtcagtcgg
ctgcagagcatggtggccggattaaggacggccccgagcgaccacctgatgcagatcttc
aagtcgtgctccagagatccctcagacagcatcctgaccagagtgaagacgctgggacaa
gctttcaaagaacattacaccagagactcagaggagatgccaggctctcatatagacttt
gcagagaaccgtttgaaactggctgagatcctttactacaagatcctggagaatgtcatc
agtcaggagaccaaacggctgcacggcaaagacatgagtatgttactggagcaggatatc
ttccactgttccctgatggcatgttgtctggaggtggtgttgttctcctacagctcccag
agaaccttcccctggatcatcaacatcttcaaactgtccccattctactttttcaaggtg
atcgaggtgtttatccgctctgaggaaggcctgtccagagatatggtgaaacatctgaac
cagatcgaggagcagattctggaaagcaaagcgtggagcgcagactccgccctgtggagc
gccttacaggatgcagggaacaaagtgcccacagtggaggaggtgaatttttcctccagt
ctggacacaggctctggtcctggttctggttctaccagcgcaggccagacccacctgcct
cttgtcgccctctcccccatcatccacccccgcatcagggagttcaggtcaggcctgggc
agtgcacgtaaagatgttcctccctctccgttgtcggtacacgaccggtacagctccccg
gcggctggcagcgctaaacgacgtctttttggtgacgaccctccaacaacaggagtgacc
ctgagcccgatgtcatcgccggctaaaaggctgacattcagctcgaccagcaccctgagg
atcggaactcagggaagcccggccaccgtcctgagtttcccactgcaagcaggtatgagt
aatgaccgaaccatcacactgatcccggttcagtcttgcgacgcctctggtaccatcaac
gctcagttcctgctgacctcaccgcaccgcaccgcctccccaagccgcgtcacatccgca
cccacgacctcagacccaccgacaggaagcggtcgaccgcggcgcaccggatccctcgct
ctgttcttcaggaaggtgtatcacctggccagtgtacgtctgagggatttgtgtgtgaag
ttagacatcccgtcagagctgcgagggaaaatctggacgtgttttgaacacacactggtt
cacagcactgatctgatgaagggcagacacctcgaccagctgctgctgtgcagcgtttac
atcatatccaaaatcaccaaagagactcacaccttccatgacatcatgaagtgttaccgc
agccaaccacaggccagcagccatgtgtaccgcagcgtcttgctgcgtcacactcctaga
gagcaggtggctgatgagaacatggaggtggatcctgtttcaggaggcgaatctgcagag
aaatccaaccaggtctcaggagaagcaaactccagccaatcagcagaggaggaacgtggt
gacctcatccagttctacaacagcgtcttcgtcctgaaggttaaaagcttcgcgctgcga
tacgccaccaacgataaccgggccgacgcacctcctctctctccgttcccgtcggttcgg
gctcagcctctttctcctcgtcgcgtttctcagagacactcgctgtacgtctcccctcac
aagaactctgcagcctgcctcacaccaaactcctacacctacaggatcaacagcagcccg
tccaaggagttatcagacatcaacaggatgatccggcagggctgcgtgagcaggaagagg
gccttcaccatggagggggacgtgatgatgtcatcagcgtgcgactcccccagcaagagg
gcgtgtccggagaacggcagcagtccggatgtgctgctgaagcggctgcaggacgtcgtg
tcggagcggcagagtcactga
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