Acanthopagrus latus (yellowfin seabream): 119020508
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Entry
119020508 CDS
T08233
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03083
Polycomb repressive complex
alat04980
Cobalamin transport and metabolism
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119020508 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
119020508 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119020508 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119020508 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119020508 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119020508 (hcfc1a)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119020508 (hcfc1a)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
119020508 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
119020508 (hcfc1a)
MLL-HCF complex
119020508 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119020508 (hcfc1a)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119020508 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
119020508
NCBI-ProteinID:
XP_036955750
EnsemblRapid:
ENSALTG00010020744
LinkDB
All DBs
Position
6:complement(26113694..26127048)
Genome browser
AA seq
1711 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSATPSQ
PLNSPKSPAPAAAAPSAQSLQQTAVLKVAAQQSATGASVVTVRPSQPGKSPLTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTATVKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLT
QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG
TVSTSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPSAITVSTAQTSLTSASSLPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGSGTVTLVCS
NPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIGAGQVCSNP
PCETHETGTTNTATTASSNMSALRVCSNPPCETHETGTTNTATTASSNMGGVQQLCSNPP
CETHVTGTTNTATQASSSMNAGQTGTTQRVCSNPPCETHETGTTNTPSTATSSMGGDQTS
TATGMVQTVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEGAEDTSSTEAASTT
AATGIVTTTQGRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEPMQTDETASAEAA
PAEQGSTAMETQAEGEAATATALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVMNESDSTGESQQPTNIPIMLTQQELAALVQQQQQLQEA
QAAAQQASVDTSLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPS
STFAPSVSVASPAKLQAAAALAEVANGIEGEKQGPQPTPVKPVVKKENQWFDVGIVKVTN
MVVTHFYVPADDSQGDDDSGIMPDYSQMKKMELQPGTAYKFRVAGINACGRGSFSEISAF
KTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPA
QLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESG
KDAASAKPAPKRPGTSPDTKTTGPKKARTDQ
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctcggatggtccggtcctgttccccggcccagacatggtcacagagctgtg
gctataaaggagcttatggttgtcttcggcggcggaaacgaaggaattgttgatgaatta
catgtatacaacactgcaacaaaccagtggtttatcccagccgtccgtggtgatataccc
cctggatgtgctgcatatggttttgtctgtgatggcacaagattgctggtgtttggtgga
atggtggagtatgggaagtacagcaatgatctctatgaactacaggccagcagatgggaa
tggaagaagttgaaagcaaaaaacccaaagaatgggccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaaatgctacctgttcggtggactggccaatgacagt
gaggacccaaaaaacaacattcccagatacctgaatgatctgtatacacttgagcttcgt
gcgggttccagcgttgttggatgggatataccaatcacatacggagttttgcctccaccc
cgcgagagccacactgctgtggtatacacagaaaagacgagcaggaaatctcgcctgata
atctatggaggaatgagcggctgtcgtctcggagatctgtggacgcttgatattgatact
ctgacatggaacaaaccctcagtaagcgggacagcaccgctccccagaagtcttcactct
gccaccaccatcacaaacaagatgtacgtttttggaggatgggtacccttggtaatggat
gacgtcaaagtggccacacatgagaaggagtggaagtgcacaaacactcttgcttgccta
aatctcgactccatgtgttgggagacagtgttgatggatactcttgaagacaacatcccc
agggcccgtgctggccactgtgctgtggccatcaattccagactttatgtttggagtggc
cgtgacggttaccgtaaagcttggaacaaccaagtctgttgtaaagacctgtggtatctg
gaaactgagcgaccccatgcaccagcccgggtgcagttagtccgtgccaacacaaactcc
ctggaggttagctggggtgccgtttcaactgctgacacctacttactgcagctgcagaaa
tatgacatccctgcaactcctgctgcagcctcgccggtcatgagtgcaactccctcacag
cctttgaactctccaaagagccctgcaccagctgctgcagcaccctctgctcagagccta
caacagacagctgttttgaaggtcgcagcacaacagtctgccacaggcgcatctgttgtc
acagtccgccccagccagcctgggaaatcccctctcactgtgacatcacttcctccaggt
gtccgaatggttgtgccagcccagactacacaaggatcgccaattggcagcagccctcag
atgagtggcatggcagctttagccgcagcagctgcagcaacacagaagatccctccctcc
tctgcaggcactgtcctcaatgttcctgcaggtgccaccattctcaagacagtagctgtt
tctcctggcacagccacagtgaaagtggcctcaccagtcatggtcagtaacccagcaacc
cggatgctgaaaaccgctgcagcccaagttggcacagcaactgcatcctctcccaccacc
accagacccatcatcaccgtgcacaaatctggtgctgtcacagttgcccaacaggcccag
gtggtaaccactgtggtgggaggagtcaccaagaccattaccctggtcaagagtcccctc
actatgggcagcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaa
accaagccagtgcagacatcagctgtcacaggccaggcttccactaaccctctcacacag
atcatacagacaaaaggtcccctcccagccggcaccatcctgaagctggtgacctccgca
gatggcaaacccaccaccatcatcaccacttcccaggcaggaggcacaggaaacaagccc
actatcctcaacatcagcggggtctctcctaccaccacgaagcagggcaccaccatcatt
aagactatcccaatgtcggccatcatgacccagccaggcgctacaggtgtgacaagcagt
gcgggcatgaaaacgcctatcacaattcttaccacaaaggtgatgaccactggaactcca
ggtaaaatcatcaccgcagtgcccaaacttgccactgcggccggccagcagggactgaca
caggtggttttgaaaggtgctcctggacaacctggcactattttgcgcactgtgcccatg
agcacagtgggtggtgttcgacttgttacaccagtgactgtgtctgcagttaagcccact
gtcacaactctggttgtcaaggggactactggtgtcaccactcttggcacagtcactggt
acagtctccaccagcctggcaggaggcactgtggacagttccaatgcctctctggttacc
cccatcaccacactgggaaccatcgctaccctgtccagccaggtcatcagcccatctgcc
ataactgtgtcaaccgctcagaccagtctaacttctgcctcctcactgccctcctctacc
atgacagtgcagaatcagcccacccaagtgactctaataacaactcccagcggtgtagaa
gctcaaccagtgcaggatctaccagtgtccatccttgcttcaccaacctctgagcagccc
agctccactgaggctggagcagctggagagggctctggaaccgtcaccctggtctgctct
aacccgccctgtgagacccatgagaccggaaccaccaacacagccaccacctcttctgcc
accatcggagcaggacaggtctgctctaatccgccctgcgagacccacgagaccggaacc
accaacacggccaccacctcctctgctacaattggagcaggacaggtgtgctctaacccg
ccctgcgagacccacgaaacgggcaccaccaacacagccacgacggcatcttcaaacatg
tctgcgctgcgtgtgtgctccaacccaccatgcgagacccacgaaactgggacaactaat
acagctaccacagcatcctctaacatggggggagtccagcagctgtgctccaacccacct
tgtgagacccacgtcacaggaaccaccaacacagccacacaggcatcgtctagcatgaac
gcaggccagacgggcaccacgcagagggtgtgctccaacccaccctgcgaaacacacgag
acggggacaaccaacaccccgtccacggccacctccagcatgggaggtgaccagaccagc
actgcgacaggcatggtccagacagtctgctccaacccgccctgtgaaacacatgagact
ggaaccaccaacacagccaccacagccacctgcagcatggagacaggcgaaggcacagca
gcgcaacagacggaggagggagcagaagataccagcagcacagaagctgcctccaccact
gcagccactggcatagttaccaccacccagggcagggccataactactgtcactcagtct
acacctgcccccggaccctctgtaccttcgatctcatcgatcacagagggtgtgagcact
gctgccagctccacagaggaacccatgcagactgatgagacggcatcagcagaagcagca
cctgcagagcagggatctaccgccatggagacacaagcagagggagaagcagccacagca
acagccttgaatctgccctcagagctgatgtctgagggccagggggccacgctcatggtg
acagggctgtcagacgaggagctggctgtgacagcagcagcagaggcagctgcgcaggct
gcagccactgaggaagcccaggccctcgctatccaggctgttctccaggcagctcagcaa
gccgtaatgaatgagagcgactctactggagagagtcagcaacccaccaacatccccatc
atgctgacacagcaggagctcgctgcactggtccaacagcagcagcagctccaggaggct
caggctgcagcacagcaggccagcgtggacaccagcctacccactgagggtcttgcgcct
gctgacagcctcaacgacccctctgttgagagcaatggacacaacgagatggctgctgct
gtcaccagcgccgtggcgtcactgctgccacgtacaactgctgagacactcgctccatca
agcacatttgcaccatctgtatcggtagcaagcccagccaaactgcaagcagcagccgct
ctagcagaggtcgccaatggcatagagggagagaagcaaggccctcagccaaccccagtg
aagcctgttgtaaagaaggagaaccagtggtttgatgttggaattgttaaagtgacaaat
atggtcgtcacacatttctatgtgccagcagatgattctcaaggagatgacgactctggc
atcatgccagattacagccagatgaagaaaatggagctgcagccgggaacagcctacaag
ttccgtgttgctggaatcaatgcttgtggtcgcggatctttctcagagatatctgcattc
aagacatgcctaccaggcttcccaggggcgccttgcgccatcaaaatcagcaagagccca
gatggtgcccacctgacctgggagccaccctcggtgacttcaggaaagattatcgagtac
tccgtgtacctggccatccagagcaaccagacagccgaagccaaggcctccaccccggca
cagctagccttcatgcgtgtgtactgtgggcccaacccctcttgcttggtgcagtcatcc
agcctctctaacgcccacatcgactacaccaccaagccagccatcatcttccgcattgcc
gcccgcaacgagaagggctacggtcctgccactcaagtccgatggctccaagaatctggc
aaagatgccgcctctgcaaaaccggccccgaaaagaccaggcacctctccagatactaag
actactggtccaaagaaagcaaggacggaccagtga
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integrated database retrieval system
