Acanthopagrus latus (yellowfin seabream): 119020606
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Entry
119020606 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119020606
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119020606
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119020606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
KASH_CCD
COG3_N
zf-C3HC4_4
zf-RING_Vps41
AAA_13
Gp58
ATG16
TSNAXIP1_N
HIP1_clath_bdg
GAS
RING_XB3-XBAT31
Aminoglyc_resit
Crescentin
Fez1
zf-RING-like
Zn_ribbon_8
USP8_interact
zf-RING_16
KxDL
PEARLI-4
Lzipper-MIP1
Sec3_CC
zf_RING_Vps8
Cast
WEMBL
FANCL_C
Spectrin_Anc-1
RINGv
bZIP_1
MAD
zf-Nse
Filament
Laminin_II
ADIP
CENP-F_leu_zip
CALCOCO1
SHE3
SLX1_C
DUF6776
Phage_GP20
DUF4473
HSCB_C
DUF1664
Motif
Other DBs
NCBI-GeneID:
119020606
NCBI-ProteinID:
XP_036955958
LinkDB
All DBs
Position
6:complement(26246981..26252507)
Genome browser
AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVTTRHIIS
KLYFDIGGEEEPSADPESLQNDVDRMKALLSSKEREWRDKQKVVDGLKDTVDKQRRDLDS
MRKEVKEKEMLCSALRKQMTYLETQQNDVQAAKEEARRLRTKMKTFESLDVLLQGQRAEV
ESMITDMGISQAAVEQLSIFCISLKKEYDNLKGSLKSSNDMCEKLKREVLTSNNKFHKAS
VEVSKTKEEMKSLQNDLARADKEISSLKKKVEFLQKTLSTPTRTNEALSRLVFESPAPME
LKQPRLHHPVGDEDIDLNMTYDITTPDDVAKRPKQVPSKKMRLDHPAPSFSKHDEKSSCP
SKVRDEDGSMDPFFRNSLLFRKKTFGSMLDPQRKTGAVKTGYDGLGGRTKFFQPSPLSEI
RPLMKAKRKKVARPPPKIATCLTLDSFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcagagcatattgcacaatttgctccgatttcttcgatcactccagagatgtt
gctgccatccactgcggacacactttccactatgaatgtctcctccagtggtttcagacg
gcccccacaaaaacctgcccacagtgtagaaaacaggtcaccaccagacacattatcagc
aagctgtattttgacattggcggagaggaggagccctcagctgacccagagagcctgcag
aatgacgttgatcgaatgaaggctcttttaagctctaaagagcgagaatggagggacaaa
cagaaggtggtggacggtttgaaagacactgtggacaagcagagaagagacctcgacagt
atgcgcaaagaggttaaagaaaaagagatgctctgttctgccctcagaaaacagatgacg
tacctggagacgcaacagaatgacgttcaggctgccaaggaggaggcccggagactcagg
accaaaatgaagacctttgaaagcctggacgtgttgctgcagggccagagagcagaggtg
gagtccatgatcactgatatggggatcagccaggcagcagtggagcagctgtccatcttc
tgcatctcgctcaaaaaagagtatgataacctcaaaggaagcctgaagtcttcaaatgac
atgtgtgagaagctgaagagagaagtgctcacctcaaacaacaagtttcacaaagcctca
gtggaggtgagcaagaccaaggaggaaatgaagtctttgcagaacgatctggccagagct
gataaagagatttctagcctgaagaagaaagtggagtttcttcagaagacgctgagcacc
ccaacacggacgaatgaagccctcagtcggcttgtctttgaaagcccggccccaatggag
ctaaagcagcctcgcctccaccaccctgtaggagacgaggacattgacctcaacatgacc
tatgacatcactacgccagatgatgtggccaagagaccgaagcaggtcccatccaagaag
atgcgactcgaccatccagcgccgtctttctcgaaacacgacgagaaaagttcttgtcca
agcaaggttcgagacgaggatggatccatggatccgttctttaggaactccctcctcttc
agaaagaagacctttggtagcatgttggaccctcagaggaagactggagctgtgaaaact
ggttatgatggtttaggaggacgtactaaattcttccagccttcccctttgtcagagatt
cgcccactgatgaaagctaaaaggaaaaaggtcgccaggcctccccccaagattgcaacc
tgcctgactctggacagcttcctcgagtaa
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