Acanthopagrus latus (yellowfin seabream): 119020698
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Entry
119020698 CDS
T08233
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119020698 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119020698 (stau1)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119020698 (stau1)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119020698 (stau1)
mRNA cycle factors
Stress granule specific factors
119020698 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
119020698
NCBI-ProteinID:
XP_036956121
LinkDB
All DBs
Position
6:complement(15132819..15140285)
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AA seq
695 aa
AA seq
DB search
MSQLQFQCPASPMPAASAPLQLGQPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
NTTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALDETTLPKPTVRTPRNTGKNPADGMTHTMELNALCMKLGKKPMY
KPIDPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPVGPILYHMELSIGGQQFFGKGRT
RQLAKHDAAAKALKVLHKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFVVCVTVGEFTGQGEGKSKKIAKKLAAAAVLGELKKLPHIPSVEKTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQSAEGMGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKTDEKTPVKKPGDGRKVT
FFEPGSVEDVALGSKEEEFRLPYLSHQQLPAGILPMVPEVAQAVGVCQGSQAKDYSRAIP
NPGKATITAMIANELLYAGTSLTAETILKNKNNMNQLPHGPLTRPSEQLSFLASVQSLQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQSNERT
GNGPVSRCGKQEIEGDLHLKQANSSTLAQTLDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagtttcagtgtccggctagccccatgcctgctgcctctgccccactg
cagctggggcagccacagcctggctacagcatcccgtgtgcctcaggcaccttaccctcg
gagagcgccagccagcccatcagaagctccgctctccctgcgggctcagccactccctac
aataccaccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaacaagattcaacctgagtataagctgctttgtgagcaagga
ccagctcactccaagattttctcagttagactcacactgggagatcagcactgggaagcg
gaggggaccagcatcaagaaagcccagcattccgcggctgcatctgccctcgatgagacg
acacttcccaagcccaccgttaggacgccccgcaacacaggcaagaacccagcagatgga
atgacacataccatggagttaaatgcactatgtatgaagcttggtaaaaagccaatgtat
aaacccatcgacccgtacccggggatgagaccaccaaacttcaactacaacgtccgggct
ccaggaccttaccagcgctctatgcaacagtactactacccatttcctccagtgggacca
atattataccacatggagctttccatcggaggccagcagttttttggtaagggacgcaca
cggcagttagccaaacatgatgctgctgccaaggccctgaaagtgctgcacaaggagcca
atcttacaacagttgccagtgatgaatggagagcctgaggaggagaacctcaacaaatca
gaaatcagtcaagtgtttgaaattgcactgaaacgaaacttacctgtcaactttgaggtt
ttaaaggaggaaggccctccccacatgaagagttttgtagtgtgtgttacagtcggggag
ttcactggtcagggtgaagggaagagtaaaaagattgccaagaagttggcagcagcagcg
gtgctgggggagttgaagaagctaccccatatacccagtgtggaaaaaacgctgccacgc
atcaagaagaaaaccaaatccatcatcaagctgcagaccagcccagaatatggccaggga
atgaatcccatcagtcgcctggctcagattcagcaggccaagaaggagaaggaaccagaa
tacagcatggtgacagagagaggtctacctcggcgcagggagttcgtcatgcaggtgaca
gtgtgtggccagtctgcggagggaatgggacccagtaaaaaggtggccaagaggaacgca
gcagagaagatgctggagctcttgggatataaagtgcctcagcctcagccccccaaaccg
gcactcaagactgatgaaaagaccccagtgaaaaagcctggtgatgggcgcaaagtgacc
ttctttgagcctggctctgtagaggacgtggcattgggttccaaggaggaggagttccgc
ctgccttacctgagccaccagcagctgcctgcaggcatcctgccgatggtacctgaggta
gctcaagcagttggggtctgccaaggatcccaggctaaagattacagtcgagctataccc
aacccaggcaaggccacaatcactgccatgattgccaacgagctgctttatgcagggaca
tccctgactgctgagactatcctgaagaacaaaaataacatgaaccaactgccccacgga
cccctcaccaggccttcagaacagctcagctttctggcatcggtgcagtccctgcaggtg
gagtacaaagattttcctaaaaacaataagaatgagtttgtgtcactgatcaactgctcg
tcccagccaccgctcatcagtcatgggattgggaaagacgtagaatcgtgtcatgatatg
gctgcactgaatatattgaagttgctctctgagttggaccagcagtcaaatgaaaggaca
ggaaatggaccagtctctcggtgtggcaagcaggaaatcgaaggtgacttgcacctcaaa
caggctaactcaagcacattggcacagaccctggatggcactgtttag
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