Acanthopagrus latus (yellowfin seabream): 119020797
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Entry
119020797 CDS
T08233
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04020
Calcium signaling pathway
alat04260
Cardiac muscle contraction
alat04261
Adrenergic signaling in cardiomyocytes
alat04270
Vascular smooth muscle contraction
alat04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119020797
04020 Calcium signaling pathway
119020797
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119020797
09153 Circulatory system
04260 Cardiac muscle contraction
119020797
04261 Adrenergic signaling in cardiomyocytes
119020797
04270 Vascular smooth muscle contraction
119020797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119020797
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119020797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119020797
NCBI-ProteinID:
XP_036956353
EnsemblRapid:
ENSALTG00010001139
LinkDB
All DBs
Position
6:complement(30637281..30753146)
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AA seq
1672 aa
AA seq
DB search
MADSSSPPLSSFIMDEETLKRKQKEKLKKLMATGGNPRPARSLLFLTLRNPFRKACISIV
EWKPFEVIILLAIFANCVALAVYLPMPEEDSNNTNSNLESLEYIFLIIFSVECFLKIVAY
GFLFHADAYLRNCWNILDFVCVSVGLFTVAVDAINHISGVEAPVGEKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMNSILKSLLPLFHITLLVLFMVTIYSIMGLELFKCKMHKTCYH
TGTNIIATVENEKPAPCAQAGNGRRCTINGTECRAGWPGPNHGITHFDNLGFSMLTVYQC
ITTQGWTDVLYWVNDAIGMEWPWIFFTTLILVGSFFVLNLVLGVLSGEFTKEREKAKSRG
EFQKLRETQQLDEDLKGYMEWITQAEVMDNDQEGHGLLTTVHGGSESGSVSKMDTLQLII
YYYKLARKWNRWLRRKCRVYVKSRLFYWWVIVLVLFNTLAIATEHHKQSQRLTNWQDNAN
KLLLSMFALEMFMKMYALGLPSYFMSLFNRFDCFVVSTGIIELILVHMGVMSVMGISVLR
CIRLLRLLKVTRYWTSLSNLVASLLNSVRSIACLLLLLFLFIVIFSLLGMQVFGGKFNFP
NQPKPRSTFDSFPQALITVFQILTGEDWNAVMYDGVMAHGGPSMPGILVSIYFIILFVCG
NFILLNVFLAIAVDNLAEAESLTLAQKEKAEDKKRKKALRASMPDKSSEEKANLAKKLAE
QRAKGVEGIPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEDPEIPDSPRPRPMADLQ
LKEEAVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLAYADIVFTSVFTAEIVLKMTTYGAILHEGSFCRNSFNILDLLVVSVSLLSMGM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAVKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYACTDPDKMTENTCKGWYIKYQEGALHEMEVHRREWANSELNFDNIFNGML
ALFTISTFEGWPKILYKAIDSNLEDTGPVYNNRVAISIFFIIYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSDHVTHLSDMLNVIFTVLFTVEMILKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVMLSEIDAALASSGGLYCLHGCTAVDPMQAIASSENMSVSVTFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALVDGTYI
NRNNNFQTFPQAVLLLFRCATGEAWHEVMLACMYGKKCDPKSDYLPGEEYTCGSNFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPQHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIPPPLGFGKFCPHRIACKRLVSMNMPLNSDGTVTFNATLFSLVRTALKIKTE
GNFEQANEELRGIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGYHPTKKNATHEIQAGLRNIEEEAAPELHRAISGDLVNEEEIEQAVTEADVEGIFR
SQGIHFGNHSDPFSAESEIANGSQATSQRPLQMAEGVITNNMNITNTSHSIY
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcagcagtcccccattgtcatctttcattatggatgaggaaactctgaag
agaaaacagaaggagaagctgaagaagctgatggcgacaggaggcaacccgaggcctgca
cgctctctgctcttcttgactctgagaaatcccttccgcaaggcatgcatcagtattgtg
gagtggaaaccttttgaagtcataatcctgctggccatctttgccaactgtgtggccctg
gctgtgtacttgccaatgccagaggaagatagcaacaacaccaacagcaacttggaaagc
ttggagtacatcttcctcatcatcttctccgttgagtgtttcctgaagattgttgcctat
ggatttcttttccatgctgatgcatacttaagaaactgctggaacattttggactttgtt
tgtgtttctgttggtctgttcactgtggctgttgatgccattaaccacatcagtggtgtt
gaggctccagttggcgaaaaaggtggtggctttgacatgaaagccctgcgggcgtttaga
gtccttcgaccactcagactggtctctggagtccccagcctgcaagtggtgatgaactcc
atactgaagtccttgctgcctctctttcatatcacccttctggtcctttttatggtcacc
atttactccattatgggactggagctcttcaagtgcaaaatgcacaagacctgctaccac
acaggcacaaacattattgcaacagtggaaaatgagaagccagctccatgtgcccaagca
gggaatggtcgacgttgcaccatcaatggcacagagtgtcgagctggctggccaggtcca
aatcatggaatcacccactttgacaacttgggcttttccatgctgactgtctaccagtgt
atcaccacacaaggctggacggatgttctttactgggtaaatgatgcaataggaatggag
tggccatggatctttttcaccacactcatcctggttggctccttctttgtgctcaacctg
gttctgggcgtactcagtggtgagttcacaaaagagcgtgagaaggccaagtcccgtgga
gagtttcaaaagcttagggaaacccagcagctggatgaggatcttaagggctatatggag
tggatcactcaggctgaggtcatggataatgaccaggagggacatggtctgctcacgaca
gtacatggaggatcagagtccggaagtgtcagcaaaatggatacgttgcagttgatcatc
tattactataagctggcccgtaagtggaatcgttggttacgacgtaaatgcagagtttat
gtcaagtccagactgttctactggtgggtgattgtgctcgtcctcttcaatacactggcc
atcgcaacggaacaccacaagcagtctcagagactcacaaattggcaagacaatgccaat
aagctgctgttgtccatgtttgcccttgagatgttcatgaagatgtatgcccttggattg
ccctcatatttcatgtctctcttcaatcgctttgactgcttcgtggtgtctactggcatc
attgaactcatccttgtccacatgggcgtcatgtcagtcatgggcatctctgtgctgcgc
tgcatacgcctgcttcgcctcctcaaagtcaccagatactggacatctctcagtaatttg
gtggcttccctcttgaactcagtccgttccattgcctgcttgctgcttctcctgttcctc
ttcattgtcatcttctccctgcttggtatgcaggtgtttggagggaagttcaattttccc
aaccagccgaaaccccgcagcacctttgatagcttccctcaggccctcatcactgtgttc
cagatcctgacaggtgaggactggaatgctgtcatgtatgatggcgtcatggctcatgga
ggaccaagcatgcctggtatcctcgtcagcatctacttcatcattctttttgtctgtgga
aatttcatccttctaaatgtgttcctggccattgctgttgataatttggcagaagctgag
tctctgactttggcacagaaagagaaagcagaggacaaaaaacgcaagaaagcactcaga
gccagcatgcctgataagtcgtcagaggagaaagcaaacctggcaaagaagttggctgag
caaagagccaagggggtagagggcatccctactactgccaagctcaaaatcgatgagttt
gagtctaatgttaatgaagtcaaagaccctttccctccagcagattttcctggtgatgat
gaggaagaggaccctgagatcccagatagccccaggcctcgtccaatggcagatctgcag
ttgaaggaggaagcagtgccgatgccagaggccagctcatttttcatctttggacctcag
aacaagttccggaagctctgccatcgtattatcaatgcaactactttcaccaacatcatc
ctcctcttcatcctactgtcatctatttctttagctgctgaggatccaattgaccccatg
tccttcaggaaccaggtgttggcctatgctgatatagtctttacttcggtgttcacagcg
gaaattgtactcaagatgacaacatatggtgcaattcttcacgaagggtctttctgccgg
aattctttcaacatcttggatcttctggtcgtcagcgtttctctcctctcaatgggcatg
gaatccagtgccatctcagttgtgaagattctcagagttttaagggtactcaggcccctg
agggccatcaacagagccaagggtctcaagcatgtggttcagtgtgtgtttgtcgccgtc
aagaccattggaaatattgttctggtcaccatgctactggacttcatgtttgcctgcatt
ggagtccaacttttcaaaggcaagttctatgcctgcacagatcctgacaaaatgacagag
aatacatgcaaaggctggtatataaagtaccaggaaggagcacttcatgaaatggaagtc
cataggagggagtgggccaattcagagctaaactttgataacatctttaatggaatgctg
gctctcttcaccatttctacatttgaaggatggccaaagatactatataaagccattgat
tcaaacttagaggatacaggtccagtgtacaacaaccgagttgccatttcaatcttcttt
atcatctacctcatccttatcgccttcttcatgatgaatatatttgtgggcttcgtcatc
gtcaccttccaggagcaaggagaacaggagtataagaactgtgagctggacaaaaatcag
cgccagtgtgtgcagtatgctcttaaggcccgtccattgcgatgttatattcccaaaaat
ccctaccagtatcaggtgtggtacatcgtcacttcctgctactttgagtaccttatgttc
ctccttattatgctcaacaccatgtgcctgggaatgcagcactgcaaccagtcagaccat
gttactcacctgtctgacatgctgaatgtgattttcactgtgctgttcaccgtggagatg
atccttaaactcatggccttcaaagctaagggttattttggagatccctggaacgtcttt
gacttcgtcatcgtcataggaagtgttgtcgatgtcatgctgagtgaaattgatgcagca
ctagcctcctctggaggactttactgtcttcatggctgcacagcagtggatcccatgcaa
gcaattgcatcctctgagaacatgagtgtatcagtcacattcttcagactgtttcgtgtc
atgcgtctagtgaaacttttgaatcgctctgaggggatacggaatcttctgtggactttc
atcaaatcacttcaggctcttccttatgtagcactgctcattctcatgctgttcttcata
tatgctgttgtgggaatgcagatatttggtaaaattgcattggttgatggcacatacatc
aacaggaacaacaacttccagacatttccacaggctgttctgctgttattcagatgtgcg
acaggggaggcatggcatgaagtgatgttggcgtgtatgtatgggaaaaagtgtgacccc
aagtcggattacctgcctggggaagagtacacctgtggatccaactttgccatcatctac
ttcatgagcttctacatgctctgtgcctttctgatcataaatctatttgtggctgtcatc
atggataactttgactacttgacacgtgattggtcaatccttggaccccagcacttggat
gagttcaagaaaatctgggcagaatacgatcctgaggccacgggccgtattaagcacctt
gatgtggttacactcctacggagaatacctccaccgctgggctttggaaagttttgtcct
catcgtatcgcctgcaagaggttggtctccatgaacatgcctctcaacagtgatggaaca
gtcaccttcaatgctacattgttctctttggtgagaactgcactgaaaataaagacagaa
ggtaattttgaacaagccaatgaggagctgaggggaattatcaagaagatttggaagcga
accagtatgaaactgctggatcaagtcatcccacctataggagatgatgaggtgacagtg
ggaaagttctatgccacctttctaatccaggactatttcaggaaattgaagaagagacaa
gaagagtactatggctaccaccccaccaagaaaaatgctacccatgagatacaggcaggg
ctgaggaacattgaggaggaggcagcaccggagctccatagagccatctctggagacctt
gtgaacgaagaggaaatagaacaagctgtgactgaagctgatgtggagggtatcttcagg
agccaaggtattcactttggaaaccactcagaccccttctctgcagagagtgaaatagcc
aatggcagccaggccactagccagcggcctctgcagatggcagagggagtcatcaccaac
aatatgaatatcaccaacacaagtcacagtatttattag
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