Acanthopagrus latus (yellowfin seabream): 119020917
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Entry
119020917 CDS
T08233
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119020917 (tmf1)
Membrane trafficking [BR:
alat04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119020917 (tmf1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
119020917
NCBI-ProteinID:
XP_036956601
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All DBs
Position
6:complement(24757907..24768987)
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AA seq
1163 aa
AA seq
DB search
MSWFNASHLSSFAKQALTSAQKSIDRVLDIKEEDQWSDTVVMPYDDVTLPGKLSLSGGWG
LTQWEAPPEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLPPGDVQGVTKSQVVSVPP
AKSQRRPQEKEKINREEVVQKEAETLKSAPADTIHESQMVAESQPAELESSPAAPYADTI
ILEPVSPADSPSSDLPNNSDNKISSVKPDAGSTDTVDSKTEESQTPSENQVEQDTTDSSE
HTAVTSKSKSSTPSDHSPSPSSKEALTEHKDSKVEDRQNDTPSPPVSAFSSGTSTTSDIE
VLDHESVLSESSASSRQETGEGKAGLHLMQGSFQLLTASTCGDFPRLEDYSKLTESCGSS
SDAFERIDSFSVQSLDSRSVSEVNSDDDIPGSRTLASVTAGPAPLTVSSVCQKQEDGVVG
KAGEEEEEEEEEEEGFTETMREQSLDEMEESGRSATPVNSEQPEELSEQEQGSEANITLC
DSASKTEEQITPPITEEMKGFSTVQILELQKIIDELSGRLEKRESQLLTVSKDKARLEEE
CDNLKDEVVSLKEESSTVQSLKDEFTQRIADTERKAQLACKERDIAKKEIKGLREELSTR
LNSSDTMEIIREKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKITKLQKKIK
EQDEELRQLQQVLDGKEEVEKQHRENIKKLNTVVERQEKELSRLQTESEELQEKNRSLQA
ALDNSYKELGELHKLNASRASEAEEAALSRNTQAKEQLSLALEKAQEEARIQQEALADQV
ADLRLALQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENL
QASLGGQTASWEKLEKNISDRLADAQTQLAVAVEKERSATEELLSIKSQLTSLESQNSLV
RQEKARLLAQLEAEKNKREKLEDESNREHAELQNLRGEHSRMLEDAKKEKLLLTNQLEME
KMKVEQEKKKSYLAQEALKEKERKAMTYPVGEPPASSTPSLSRSSSISGADNAGLHTSVL
SQDDSLDHSLSTMAMSVSMSGTNLYEAARLSGGSNIIENLQSQLKLREGEIAQLQLEISG
LERSRSVMAEELVRLTNQNDDMEEKVKEIPKLKVQLKDLEQRHNTILQMYGEKAEEAEEL
RLDLEDVKNMYKTQIDELLQNQK
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccagcttcgctaaacaagctttaacatcagct
cagaagtcaatcgaccgagtcctggacatcaaagaagaggaccagtggagtgacacagtt
gtaatgccctatgatgatgtcaccttacctggcaagctgtcattaagtggaggttggggt
ttgacgcagtgggaagcaccacctgaagaaaagaccaccactcctcctccttcctctgag
gccattactactcctgtcacccgcacagttgtggatgaatccgaaaactttttcagtgcc
tttctgccacctggagacgtacaaggagtgaccaaatcccaggtcgtgtctgtgcccccg
gcaaagtctcaaaggcggcctcaggagaaggaaaagataaacagagaggaagtggtccaa
aaggaagcagagaccctaaagtcagcacctgctgatacaattcatgagagtcagatggtt
gctgagagccagccagctgagctggagtcttcaccggcagctccttatgcagacactatc
atcctggagccagtttctcctgccgattctccttccagtgatcttcctaataactctgac
aacaaaataagcagtgtaaaaccagatgctggttccacagatactgtggactcaaaaaca
gaggagtcacagactccatctgagaaccaggttgagcaggataccacagattcctctgaa
catactgcagttacttcaaaatccaagagctctaccccttctgatcattcgccctccccg
tcctctaaggaagcactcacagagcataaagactcaaaggtagaggaccgtcaaaatgat
accccctctcctccagtcagtgctttctcctcaggaacctccaccaccagtgacattgaa
gtgctggaccatgagtctgttttaagtgagagctcagctagctccagacaagaaacaggg
gagggcaaggctggtcttcacctgatgcagggctccttccagctcctcacagcctccact
tgtggagacttcccacgtctggaggactattctaaactcacagagagctgcggctcctca
tcggatgcatttgagcgcatagattcattcagtgtgcagtcgctggacagccggagtgtc
agcgaggttaactcggatgatgacatccccggcagtcgaacactagcatctgtcaccgca
ggccctgctcctttaactgtgtcatcagtgtgtcagaagcaggaagatggagtggtgggg
aaggctggagaggaggaggaggaggaggaggaggaggaggaaggctttactgaaacaatg
agggagcagtcgttggatgagatggaggagagtggacgaagtgcgacgcctgttaatagc
gagcagcctgaggagctgtcagagcaggaacagggttctgaggctaacatcacactgtgt
gactccgcctccaaaactgaagaacaaatcactccaccaatcacagaagagatgaaaggt
ttctcaacagttcagattttggagcttcaaaagattattgatgagctgtcaggccgcctt
gagaagagagagtctcagctgctgacagtcagcaaagacaaggccaggctggaggaggag
tgtgacaatctcaaagatgaagtggtaagcctgaaggaggagagctccactgttcagtcc
ctaaaggatgagttcacccagcgcatagcagatacagagaggaaggctcagctcgcctgc
aaagaaagagacatagccaagaaggaaataaagggcttgcgtgaagagctttctacaaga
cttaactccagtgacacaatggagatcatcagagagaaggaagagcagatccgaggcctg
ctggaagaaggtgaaaagctgtccaagcagcagttgcagcacagcaacatcatcaagaaa
ctgcgtgtgaaggagaaggagagtgacaccaagatcaccaagctacagaagaaaatcaag
gagcaggacgaggagctcaggcagttgcagcaggttctagatgggaaggaggaggtggag
aaacagcacagggagaacatcaagaagctgaacactgtggtagagcgtcaggagaaggag
ctgagcaggctgcagactgaatctgaggagctgcaggagaagaacaggagcctgcaggct
gctttggacaattcttacaaggagctgggagaacttcacaagttgaatgccagcagagcc
agtgaggctgaagaagcagctcttagcaggaacacgcaggccaaggaacagctgagcttg
gctcttgagaaggcccaggaggaggccaggattcaacaggaggccctggctgatcaggtg
gctgacctgagactggctcttcagagggctgagcaacagcaagcgaggaaagaagattat
ttgagagaggagattagtgagctacagcagaggcttcaggaagcagagacaaggaaccag
gaactcagtcagagtgttacctcagcaacacggcccttactgcgacagattgagaaccta
caagcttctttgggtggacagacggcatcctgggaaaaactggagaagaacatctctgat
aggctagcggacgctcagacacagctggcagttgctgttgagaaggaacgttcagcgaca
gaggaactgctctctatcaagtcccagctgacctctctggagtcccagaattcattggtc
cgccaggagaaggcccgactgctggcacaacttgaggctgagaagaacaagagagagaaa
ctggaggatgagagcaacagggagcacgctgagctgcaaaatctgcgaggagaacacagt
cggatgctagaggatgcaaagaaagagaagctgctgctgaccaatcaattagagatggag
aagatgaaggtggagcaggagaagaagaagagctacttggcacaagaggcactcaaggag
aaggagcggaaggccatgacctaccctgttggcgagcccccagcatcctccacaccctcc
ctgtctcgctccagctcaatcagtggggcagacaatgctggtctgcacacttctgttctt
tcccaggatgactctttagaccattcactcagtaccatggccatgtctgtgtcgatgagt
gggaccaacctgtacgaagctgccaggctttctggaggctccaacatcatagagaatctc
cagtctcagctcaaactcagagaaggagagatagcacagctgcagcttgagatctccggc
ctcgagaggagtcgttcagtgatggcagaagagctggtccgactcaccaatcaaaacgat
gatatggaggagaaggtgaaggagattcccaagttgaaggttcagctcaaggatctggag
cagaggcacaacaccatcctgcagatgtacggagaaaaagctgaagaggcagaggaactg
agactggatcttgaagatgtgaagaacatgtacaaaacccagatagatgaactgctgcag
aaccagaaataa
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integrated database retrieval system
