Acanthopagrus latus (yellowfin seabream): 119021040
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Entry
119021040 CDS
T08233
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04020
Calcium signaling pathway
alat04218
Cellular senescence
alat04260
Cardiac muscle contraction
alat04261
Adrenergic signaling in cardiomyocytes
alat04270
Vascular smooth muscle contraction
alat04530
Tight junction
alat04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119021040 (cacna1da)
04020 Calcium signaling pathway
119021040 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119021040 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
119021040 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119021040 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
119021040 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
119021040 (cacna1da)
04270 Vascular smooth muscle contraction
119021040 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119021040 (cacna1da)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119021040 (cacna1da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
119021040
NCBI-ProteinID:
XP_036956852
LinkDB
All DBs
Position
6:16335749..16409301
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AA seq
2109 aa
AA seq
DB search
MSANGPTPDPAPAAPEALPASTPAVVPAPAPAPAPAPAAPPAPPALPAPTSGTIPVGALA
QKKRQQYAKSKKQGSNANSRPPRALFCLNLNNPIRRACISLVEWKPFDIFILIAIFANCM
ALAVYVPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLD
FVIVVIGLFSVVLELLTKEEKGEGEGEVPHPSMHGHGGKPGGFDVKALRAFRVLRPLRLV
SGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFLPGSDGLAE
EEPAPCAISGHGRQCPINGSECREGWQGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLY
WMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQL
EEDLKGYLDWITQAEDIDPDNEDEADEESKRNRVTLADLTEKKKGRFGWFSQSSDTHASV
PASETESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFY
WLVIILVFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSL
FNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNS
MKSIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGED
WNAVMYDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDGG
DNKGDKKDDEKDEKEEEEDNEETAAEEEDPEVPSGPRPVISELVKKEKITPIPEGSAFFI
FSSTNPFRVFCHRLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTA
IFTVEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRV
LRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEA
KSSPEECKGTYILYKDGDVNQPTIHKRLWHNSDFNFDNVLMAMMALFTVSTFEGWPALLY
KAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCEL
DKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYG
QSALFNYVMDILNMVFTTVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITE
VNNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFI
YAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACMPGKLCDP
ESDYNPGEEMTCGSGFAIVYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLD
EFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGT
VMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTV
GKFYATFLIQDYFRKFKKRKEEGLVGAHPSQNNTAIALQAGLRTLHDIGPEIRRAISCDL
QDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQVQPPPHYAHME
QPVGRLSRANAMSHPNHHHHHHHHHHRHHNSYGKSPKSTNINLNNANMSSLPNGGHHRYY
EHAPPNGYPGHRSSYYDYDKPRTPQGQRRRYYETYVRSRGVDGHHPTIRREEEFDEDRFS
GEYYSGEEFYEDDSMLSGDRYQNSDTEYETPKGYHHPDSYYDDDEQPLYRDSRRSPKRRL
LPATPQGNRRPSFNFECLRRQSSQDELPHQRTALPLHLMQHQVMAVAGLDSSRAHRLSPT
RSTRSWATPPATPASKDQSPYYTPLIRVDHPQRGSAASSQVSVRKSSWYTDDPEFSQRTY
SPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACEMTI
DEMESAASHLLNGGMAPAINGVNVFPILTPRDYELQDTAASYSDEEPETEPRAPYEEDLA
DEMICITTL
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcccaccccagacccagcccctgcggccccagaggcccttcccgcc
tccacccccgctgtggtcccagccccggctccagctccagccccagcccctgcggcaccg
cctgctcctccggccctgcccgccccaacgtccggcaccatcccggtgggtgcgttggca
cagaagaagcggcagcagtatgccaaaagcaagaaacagggcagtaacgccaacagcagg
ccaccgagggccctgttctgcctcaacctcaacaaccccatacgaagggcctgcatcagc
ctggtggagtggaagccatttgatatctttatattaattgctatttttgccaattgtatg
gccttagctgtctacgtccccttccctgaagatgattccaactccacaaaccacgacctg
gaaacagttgagtatgccttcctcatcattttcacgatcgagacctttctgaagattatc
gcttacggtttggtgatgcaccagaacgcgtatgtgcgaaacggttggaacatgctggat
ttcgtcatcgtcgtcatcggactcttcagtgttgtcttggagctattgaccaaagaggag
aagggagaaggcgagggagaagttccccatccttcaatgcacgggcacgggggtaaacca
ggtggatttgatgttaaagcccttcgagccttccgtgtgctgcgacccctgcggctggtc
tcaggagtacccagtttacaggtggtgttgaactccatcattaaagccatggtccctctc
cttcacattgccctcctcgtcttgttcgtcatcatcatctatgctattatcggcctggag
cttttcatcggtaaaatgcacgcgacctgctttcttcctggctcagatgggttagcagaa
gaggaaccagctccgtgtgcgatctcagggcacgggcgccaatgccccatcaacggcagc
gagtgccgggaaggctggcaaggtcccaacggtggcatcaccaacttcgacaacttcctg
tttgccatgctgacggtgtttcagtgcatcaccatggagggctggacagacgtgctgtac
tggatgaatgatgctatgggctttgagcttccatgggtgtactttgtcagtcttgtcatc
ttcggctcctttttcgtgctgaaccttgttttgggtgtgttgagcggagagttctccaaa
gagagagagaaggccaaagctcgtggagacttccagaagctgcgtgagaagcagcagttg
gaggaggatctgaagggttacctggactggatcactcaggctgaggatatagacccggac
aacgaagatgaggccgatgaggagagcaagcgcaaccgggtgactctggctgaccttact
gagaagaagaaaggaaggtttgggtggttcagccagtcgtccgacactcatgcaagcgtt
ccagccagcgagacagaatctgtaaacaccgagaatcaaaatggggaggatgaaaagacg
ccgtgctgtggacctctgtgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgc
cgctggaacaggttctgccgcaggaagtgccgactggctgtcaaatcggtgcctttctat
tggctggtcatcatcctggtgttcctcaacactctcaccatatcatcagagcactacaac
cagcctatgtggctgactcaagtgcaggatgtggccaacaaggtgctgctcgccctcttc
acatgtgagatgttggtgaagatgtacagtctcgggctgcaggcgtattttgtttcactg
ttcaaccgctttgactgctttgtggtgtgcggaggaatcactgaaaccatcctggtcgaa
ctggaaatcatgtctccgctcggtatttctgtgttccgctgtgtccgcctgttgaggatc
ttcaaggtcacacgtcactggcagtccctgagcaacctggtggcatctctgctcaactcc
atgaagtccatcgcctccctgctgctgctgctcttcctcttcatcatcatcttctcactg
ctgggcatgcaggtctttggtgggaagttcaacttcgacgagacccagaccaagaggagt
acttttgacaacttcccccaagcccttctgaccgtgtttcagatcctgactggtgaggac
tggaatgccgtgatgtacgatgggataatggcttacggaggcccgtcctcttctgggatg
atcgtgtgcttttacttcatcatcctcttcatctgcggaaactatatcctcctgaatgtc
ttcttggctatcgccgtggacaacttggcagacgcagagtctctcaacacagacggagga
gacaataaaggggacaagaaggatgatgagaaagatgagaaggaggaggaggaggacaac
gaggagaccgcggcagaggaggaggatccagaagttccatcagggccccggccggtcatc
tccgagctggtcaagaaggagaagatcactcccatcccagagggaagcgccttcttcatc
ttcagcagcacaaacccgtttcgagtgttttgccacaggcttatcaatcaccacatattc
accaacctcatcctggtgttcatcatgctcagctccgtctcactcgctgctgaggatccg
atcagaaacttctctgctcgcaatattatacttggttactttgactatgctttcacggct
atctttactgttgagatcgttttgaagatgacgacatacggagccttcctccataaagga
gcattctgtaggaattacttcaacctgctggacctgttggtggtgggagtgtccctcgtc
tcctttggcatccagtcctcggccatctcagtggtgaagattcttagggttcttcgagtt
cttcgacccctgagggccatcaaccgagctaaaggcctgaagcacgtggtgcagtgtgtg
ttcgtggccatccgaactatcggtaacatcatgatcgtcaccactctgctacagttcatg
ttcgcctgcataggggtgcagctgtttaagggaaagttttatcgctgcacggatgaagcc
aagtccagcccagaagagtgcaagggcacctacatcctgtataaagatggagatgtgaac
cagccgaccatccacaaaagactgtggcacaacagcgacttcaacttcgacaatgtcctc
atggctatgatggctctattcactgtgtccacttttgaaggctggcctgcgttactgtac
aaggccatcgactccaacagggagaacctcgggcccatttacaactaccgtgtggagatt
tccatcttcttcatcatctacatcatcatcattgctttcttcatgatgaacatcttcgta
ggtttcgtgatcgtcacatttcaggaacaaggagaaaaggagtacaaaaactgtgaactg
gacaagaaccagcgtcagtgtgtggagtatgctctaaaggctcgtccactgaggaggtac
atccctaagaacccgtaccagtataagttctggtatgtggtgaactccaccgggtttgag
tacatcatgtttgtgctcatcatgctcaacacgctctgcctggccgtacagcactacggc
cagtcggcgctcttcaactatgtgatggacattcttaatatggtcttcaccactgtcttc
actgtggaaatggttctcaaactcatcgctttcaaacccaggcactatttcgctgatgct
tggaacacatttgatgccttaattgttgttggtagcgtcgtcgatattgctatcactgaa
gttaacaacacggaggacagcgctcgcatctccatcaccttcttccgtctgtttcgagtc
atgcggctggtcaagctcctcagcagaggggagggcattcgcaccctgctttggacattc
atcaagtcctttcaggctctgccatatgttgctctcctgatagccatgctgttcttcatc
tacgctgtcatcggcatgcaggtgtttggaaaggtggctatggtggacgggacacacatc
aacagaaacaacaacttccagaccttccctcaggctgtgctccttctcttcagatgtgcc
actggagaggcatggcaagagatcatgttagcctgcatgccagggaagctgtgtgacccg
gagtccgactacaaccccggcgaagagatgacgtgtggcagtggattcgcaatagtttac
ttcattaccttctacatgctctgcgccttcttgattatcaacctgtttgtggccgtcatc
atggacaactttgactatctgacacgtgattggtccattcttggtccgcaccacctcgac
gaattcaagagaatatggtcagagtacgacccagaggcaaagggcagaattaaacatctg
gatgtcgtgacgctccttcgtcgtatccagcctcctctgggcttcggcaaactgtgtcct
cacagagtggcttgcaagaggctggtagccatgaacatgcctctgaacagtgacggcaca
gtcatgtttaacgccactttgtttgcactggtgcgcactgccctgaagatcaaaacagaa
ggtaatctagagcaggccaacgaagagctgcgagccgtcatcaagaaaatctggaagaga
accagcatgaagctgctggatcaagtggtgccccccgctggtgatgatgaggtaaccgtg
gggaagttctatgccaccttcctgatacaggactactttaggaaattcaagaaacgtaaa
gaggaaggcctggtgggtgctcacccctcccagaacaacacggcgatcgctttgcaggcc
ggccttcgcacgctgcatgatattgggcctgaaattcgccgagcgatatcatgtgatctg
caggatgacgagctagtagactttattcctgaggaagacgaggaaatttataggcgtaac
ggtggactcttcgggaaccatctcatgaacggcggtcaccggcgatccaacggccatcag
accaacgccacacagcggcctctacaggtgcagcctccgcctcactacgcccacatggag
cagccggtgggacgcctgtctcgagccaatgcgatgtcccaccccaaccaccatcatcac
caccaccaccatcaccatcgccaccacaactcctacggcaagtctcccaaatccaccaac
atcaacctcaacaatgccaacatgtccagtctgcccaacggaggacaccatcgttactac
gaacacgcacctcccaatggctacccaggtcatcgcagctcctactacgactacgacaag
ccccggacaccccagggtcaaagaaggcgctactatgagacctatgttaggtcccgcggt
gtggatggacaccaccccaccatccgcagggaggaggagtttgatgaagaccgcttctcc
ggggagtattacagtggggaggagttttatgaagatgacagcatgctgtcaggggacagg
tatcagaacagtgacacagagtatgagactccaaaaggttaccatcaccctgacagttac
tatgacgatgacgagcagcctctctaccgagactcgcggaggtcaccaaagagacggctg
cttcctgccacacctcaaggtaacaggaggccatccttcaactttgagtgtctgcgcaga
caaagtagccaggacgagcttccacatcagcgcaccgctctaccactgcaccttatgcag
caccaggttatggctgtagcaggcctggactccagcagagcccaccgcctctccccgacc
cgctccacccgctcctgggccacaccccctgccaccccggccagtaaagaccagtcaccg
tactacactcctctcatccgtgtggaccatccacaaagggggagcgcagccagcagccaa
gtgtcagtgcgtaagagctcctggtacacggacgaccccgagttctcccagaggacgtac
tcgccggtccacctgcaggtgccacctgagtaccacaaccagtaccaccagaagagaggc
agtgccaccagccttgtggaagcggttttgatatcagaaggacttgggagatacgccaag
gaccccaagttcgtcgctgccacaaagcacgagatagcagatgcgtgtgagatgacaata
gatgagatggagagcgcagccagccatctgctgaatggagggatggccccggccatcaac
ggggtcaacgtgttccccattctgactccaagggattatgaactgcaggacacagcagcc
agctacagcgacgaggagccagagacagaaccgagagctccctatgaggaggacctggca
gatgagatgatctgcatcacaactttatag
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integrated database retrieval system
