Acanthopagrus latus (yellowfin seabream): 119021045
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Entry
119021045 CDS
T08233
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04512
ECM-receptor interaction
alat04514
Cell adhesion molecules
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119021045 (sdc4)
04514 Cell adhesion molecules
119021045 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119021045 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119021045 (sdc4)
Proteoglycans [BR:
alat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
119021045 (sdc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
119021045
NCBI-ProteinID:
XP_036956868
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All DBs
Position
6:1538831..1558078
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AA seq
221 aa
AA seq
DB search
MLNLCLVLILSASVFSESQVRETETWMPMKTTQTAAMLTHHDLESSGSDFGFTDDEDDDN
EYDGGDYYEDELNVDDEEEYDDDFSGSGDQTTTVSPGREAKTSAKPNVNDNKIPEVERPV
RPTVNEVEIVQNENEIPLLRNGAEPGEEHPSNVLMSHASEDSILKKTEVLAALITGGAVC
LMFAVLLILLLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacctgtgcctcgtgctgattctatctgcctccgtgttttcagagtcgcaggtg
agggagacggagacatggatgcccatgaagaccacacagacggccgccatgttgacacac
catgacctggagtcatcaggctctgactttggcttcacagacgacgaagacgacgacaat
gaatacgacggtggcgattactacgaggacgagctgaacgtcgacgacgaggaggagtac
gatgacgacttctccggctctggtgaccaaacaacaactgtgtcacctggacgggaggcc
aagacgtccgctaagcccaatgtgaacgacaacaagatcccagaggtggagcgcccggtg
cggccgaccgttaacgaggtggagatcgtccagaacgaaaatgaaatccccctgctgagg
aacggggccgagcccggcgaggagcacccatccaacgtcctcatgtcccacgccagcgaa
gacagcatccttaaaaagacggaggtcctcgcagctctgatcacaggaggcgccgtctgc
ctgatgttcgccgtcctcctcatcctcctcctcatctatcgcatgaagaagaaggacgag
ggcagctacgatttggggaagaagcccatctacaagaaagctcccaccacagagatctac
gcatag
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