Acanthopagrus latus (yellowfin seabream): 119021045
Help
Entry
119021045 CDS
T08233
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04512
ECM-receptor interaction
alat04514
Cell adhesion molecule (CAM) interaction
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119021045 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
119021045 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119021045 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119021045 (sdc4)
Proteoglycans [BR:
alat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
119021045 (sdc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
119021045
NCBI-ProteinID:
XP_036956868
LinkDB
All DBs
Position
6:1538831..1558078
Genome browser
AA seq
221 aa
AA seq
DB search
MLNLCLVLILSASVFSESQVRETETWMPMKTTQTAAMLTHHDLESSGSDFGFTDDEDDDN
EYDGGDYYEDELNVDDEEEYDDDFSGSGDQTTTVSPGREAKTSAKPNVNDNKIPEVERPV
RPTVNEVEIVQNENEIPLLRNGAEPGEEHPSNVLMSHASEDSILKKTEVLAALITGGAVC
LMFAVLLILLLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacctgtgcctcgtgctgattctatctgcctccgtgttttcagagtcgcaggtg
agggagacggagacatggatgcccatgaagaccacacagacggccgccatgttgacacac
catgacctggagtcatcaggctctgactttggcttcacagacgacgaagacgacgacaat
gaatacgacggtggcgattactacgaggacgagctgaacgtcgacgacgaggaggagtac
gatgacgacttctccggctctggtgaccaaacaacaactgtgtcacctggacgggaggcc
aagacgtccgctaagcccaatgtgaacgacaacaagatcccagaggtggagcgcccggtg
cggccgaccgttaacgaggtggagatcgtccagaacgaaaatgaaatccccctgctgagg
aacggggccgagcccggcgaggagcacccatccaacgtcctcatgtcccacgccagcgaa
gacagcatccttaaaaagacggaggtcctcgcagctctgatcacaggaggcgccgtctgc
ctgatgttcgccgtcctcctcatcctcctcctcatctatcgcatgaagaagaaggacgag
ggcagctacgatttggggaagaagcccatctacaagaaagctcccaccacagagatctac
gcatag
DBGET
integrated database retrieval system
