Acanthopagrus latus (yellowfin seabream): 119021197
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Entry
119021197 CDS
T08233
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119021197 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119021197 (taf4a)
03036 Chromosome and associated proteins [BR:
alat03036
]
119021197 (taf4a)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119021197 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
119021197 (taf4a)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119021197 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TMP_3
Motif
Other DBs
NCBI-GeneID:
119021197
NCBI-ProteinID:
XP_036957183
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Position
6:25327439..25339775
Genome browser
AA seq
850 aa
AA seq
DB search
MDASTASTVSSTGHNPGTPLVVSDGVTSLPTHQGKVSSCSAQIFNGSQTMNSHTSGSAAP
LVGTTVTSGVGNCSSAAASVTAVTSGPVMSKVVAGAITPPSTNSVIQTPLMNSSVVVSAQ
PVSQAAGPAVTLVRPPMQSTAGSGATLNGNNIASPAFVASTTGQTGITVQTPLVNSSQSP
NSVSVSAGSHIIKAEPPTTIIQSAPQPAVIPSAPRVPVTVAAGPGGIRASTPQMLAPRLP
QTSPGQPSIHNIQLPPGMVLVRSESGQLLMIPQQTLAQMQAQAQGGLAPRPATPTNMPPG
QAPGNTIISRQVAPSTTIRQGCPAPTSLTATTTLHRPPVLQSSVGAPVPGMTPRTISQTA
GTTVTSVTVSKETLENVKKCKSFLSTLIKLASTGKQSTETAASVRELVKDLLEGKLEAEE
FTSRLYKELNSSPQPYLVPFLKRSLPALRQLTPDSAVFIQQSQLPQLASAPASSTSSTPS
TVVLGSPAPRLTAPVSRPQLQPGVSKPGQSSSLVLQPQPQRAMLRPQVTLPTPPMVTLRN
QAPGRIMLGQQQVQLKELQPVPVRPESSPVPKQVFAAALTPAQRNKLKEAGGTFKDDDDI
NDVASMAGVNLSEESANILATNSGLVGAVTHSCKDEAFLSCALLQRRMLEIGRRYGVTDL
GAEVVNYISHATQQRLQNLLEKVSQVAQHKNGNFKEDNKYEQSSDVRAQLKFFEQLDQLE
KQRKEDEEREILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQMRQREANLTALAAIGP
RKKRKILDSPSSSTAAEGSGSGPSVSGAGSSGSRPTRQRITRVNLRDLLFCLENERFTSR
SHFLYKGFLK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcgacggccagcacggtctccagcacgggacacaaccctggcacaccactt
gttgttagtgacggtgtaacttctctccccactcaccaggggaaagtaagctcatgctca
gcgcagattttcaatgggagccaaactatgaactcgcacacttcgggaagcgctgcccct
ctcgtagggacgactgtgacaagtggagtcggtaactgcagcagcgccgcggcatctgtc
acagctgtcaccagtggaccagtgatgtctaaagttgtggccggtgcgataacgcccccc
tcgactaacagtgtcattcagacgcctctcatgaactccagtgttgtcgtctcagctcag
cctgtcagccaggctgcaggacccgccgtgacactcgtcaggccgcctatgcaaagcacc
gcggggtccggggcgactctgaatgggaacaatattgcgagccctgcttttgtggccagt
acaacaggtcagacaggtatcaccgttcaaaccccgcttgtaaacagtagccagtctccc
aactcggtgtctgtgagcgcagggtcgcacataatcaaggcagagccacccacaacaata
atacagtcagcgccgcagcccgctgtcattcccagcgcaccccgggttccggtgacggtg
gctgccggtccaggcgggatccgagcctcgacgcctcagatgttggccccaaggctcccc
cagacctcccctggacagcccagtatacataacatccagctcccgccggggatggtgctt
gtacgcagtgagagtggacagctgctgatgattcctcagcagactctggcccagatgcag
gcgcaggcgcaggggggcttagcacctcggccagctacaccaacaaacatgcctcctggc
caggctcctggaaacaccatcatcagcagacaggtggcacccagtaccaccatccgtcag
ggttgtccagctccaacgtccctcactgcgaccaccacacttcacaggccccctgtcctt
cagagctcagttggggctccagtaccaggaatgacccccaggaccatcagccaaacagct
gggaccacagttacctcagtaacagtgagcaaagagacattggagaatgtgaagaaatgt
aagagcttcctgtctacactgatcaagctggcatccacagggaaacagtctacagagact
gcagccagtgtgagagagctggtcaaggacctgctggaaggcaaactggaagcagaggaa
ttcaccagcagattatacaaagagctaaactcctcaccccaaccttaccttgtgcctttc
ctcaagagaagcctcccagccttgagacagctcaccccagactcagcagtcttcatccag
cagagtcagctcccccagctggcatcagctccggcctcctccacttcatccacccccagc
acggtggtcctgggcagcccagccccccgcctcactgctccagtcagcaggccccagctc
cagccaggagttagcaaaccaggacagtcatcctcactggttctccagcctcagccgcag
agagcaatgctgagacctcaggtaaccttaccgacgccccccatggtgactctcaggaat
caggcccctggtcgcatcatgcttggacagcaacaggttcagctgaaagagctgcagcca
gttccggtgaggccagagtcatcacctgttcccaaacaagtcttcgctgcagctttgacc
ccggctcaaaggaacaaactgaaagaggcgggtggcactttcaaagatgatgacgatatc
aatgacgtggcctccatggctggagtgaacctgtcagaggaaagtgctaatatcctggca
accaattctggattggtgggagcggtgacacattcatgtaaggacgaggcttttctctcc
tgtgctctgctgcagaggagaatgctggagattggcaggagatacggtgtgacagacctg
ggtgcagaggtggtgaactacatctcccatgctacacagcagcggctccagaacctgctg
gaaaaagtttcccaagtagcccagcataaaaatggcaatttcaaggaggataacaaatac
gagcagagcagtgatgttcgtgctcagctcaagttctttgagcagctggaccagttagaa
aaacaacggaaggaggatgaggagagagagatcctcctaaaggcagctaagtctcgagct
cggcaagaggacccagagcagctgcgcctgaaacagaaggcgaaagagatgcagcagcag
gagctggctcagatgaggcagagggaggccaacctgacggctctggcagccattggtccc
aggaagaagaggaagattctggattctccatcttcctctactgcagctgagggatcagga
tcaggcccctctgtgtctggtgctggttcatcaggctccagacccacaaggcagcgcatc
acgcgtgtcaacctcagggacctgctcttctgtttggagaatgagagatttaccagtcgc
tcccatttcctctacaagggctttctcaaatag
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