Acanthopagrus latus (yellowfin seabream): 119021231
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Entry
119021231 CDS
T08233
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119021231 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119021231 (stx16)
Membrane trafficking [BR:
alat04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
119021231 (stx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
MCPsignal
Syntaxin_2
Orf78
DUF2116
DUF6548
T3SS_needle_E
Motif
Other DBs
NCBI-GeneID:
119021231
NCBI-ProteinID:
XP_036957283
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Position
6:complement(19722894..19730540)
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AA seq
321 aa
AA seq
DB search
MATRRLTDAFLLMRNNAIQNRQILAEQVSTYDPRLSTRSNAAELDEMADDRMALVSGISL
DPEAAIGVTKKLPPKWIEGVDEIQYEITRVRQKMKDLALLHDKHMNRPTLDDSSEEEHAI
EITTQEITQMFHRCQRAVTGLQSRCGHCTEQEERLLRNVVSSLAQSLQELSTNFRHTQSG
YLKRMKNREERSKHFFDSGPLMEEDEELAVYDKGFTDDQLMLVEQNSVMVEEREREIRQI
VQSISDLNEIFRDLAGMVVEQGTVLDRIDFNVEQACVKTEDGLKQLQKAEQYQKKNRKML
VILILFVIVIVLILILFGTKF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggccactaggcgtctgaccgatgccttcttgttaatgcggaacaatgcaatccaaaac
cggcagatattggctgagcaagtgagtacatacgacccccgtctgagtacacgtagcaat
gctgcggaacttgatgagatggctgatgatcgaatggccctggtgtcaggaatcagtctg
gatcctgaagctgctattggagtcacgaagaaactgccgcccaaatggatagagggggtt
gatgagatccagtatgagatcacacgggttcggcagaagatgaaggatcttgccttactt
catgacaagcatatgaatcgtcccacgctcgatgacagtagtgaggaagagcatgccata
gaaatcactacacaggagataacacagatgtttcatcgatgccagcgagccgtgacgggt
ttgcagtctcgctgtggccactgcaccgagcaggaggagaggctgctgagaaacgtggtg
tcgtccctggcacagagcctgcaggagctgtccaccaatttcagacacacacagtccggc
tacctaaaacgtatgaagaatcgcgaggagaggtcaaagcacttttttgactctgggccc
ctgatggaagaggacgaagagttagctgtttatgacaaggggttcacagacgaccagctg
atgctggtggagcagaactcagtaatggttgaagagcgtgagagggagatccgacaaata
gtgcagtccatctcagatctgaatgagattttcagggacttggctggaatggtggtggaa
cagggcaccgttcttgacagaattgacttcaatgtggagcaggcgtgtgttaaaacagaa
gatggattgaaacagttacaaaaggcagaacagtaccagaagaaaaacagaaagatgctg
gtcattttgatcctctttgtcatagtaattgttctaattcttattctttttggaacaaag
ttttaa
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