Acanthopagrus latus (yellowfin seabream): 119021405
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Entry
119021405 CDS
T08233
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04110
Cell cycle
alat04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119021405 (smc3)
04114 Oocyte meiosis
119021405 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119021405 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119021405 (smc3)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119021405 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
119021405 (smc3)
Proteoglycans [BR:
alat00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119021405 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
119021405
NCBI-ProteinID:
XP_036957581
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All DBs
Position
1:complement(21512272..21535584)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYNKLDQDLNEVKNRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSEDLDSMIDKTEGEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGESGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttacagggaccaaacggtggta
gaccctttcagtccaaagcacaatgtcattgttggaagaaatgggtcaggaaaaagtaac
tttttctatgccatccagtttgtgctcagtgatgagttcagtcacctgcgacctgaacag
cgcctggccctgctccatgagggaactggtcctcgtgtcatttcagcttttgtggagatt
atatttgacaactctgacaaccggctgccgatcgacaaagaggaagtctcccttcgccgt
gtcattggtgcaaagaaggaccagtacttcttagacaagaagatggtgactaagaatgat
gtcatgaacctcctggagagtgccggcttctctcgcagtaacccctactacattgtcaag
cagggaaagatcaaccaaatggccacagcaccggactcccagcgtctgaagctgctgaga
gaggtggcagggacacgtgtgtatgatgagcgcaaggaggagagtatttctctcatgaaa
gagaccgaggggaagcgagagaagatcaacgagctgttgaagtacattgaggagcgtctg
cacaccctggaggatgagaaggaggaactggctcagtaccagaagtgggacaagatgaga
agagccttggagtacaccatctacaaccaggagctgaatgaaacccgcgccaaactggac
gagctgtcgtccaagagagagacttgtggggacaaatccagacagctgcgagatgctcag
caagatgcccgagacaaagtagaggagacagagcgtgtggtgcgagagctgaagtcaaag
atctcagccatgaaggaggagagggagcaactatcggcggagcgccaggagcagatcaag
cagaggaccaagctcgagctgaaggccaaggacctgcaggacgagctggcaggcaacagc
gaacagaggaaacgcctgctgaaggagcgacagaaactgctggagaaaatcgaggaaaag
caaaaagagctgcaggagactgaacccaaattcaacatggtgaaggaaaaagaggagcgg
ggcatatcgagactggcccaggctacacaggagaggacagatctgtatgccaagcagggc
cgtggcagccagttcacctccaaggaggagagggacaagtggatcaagaaggagctgaag
tctttggaccaggccatcaatgataaaaagaggcagattgcagccattcacaaagacctg
gaggacacagagaccaacaaggagaagaacctcgagcagtacaataaactcgatcaagat
ctaaatgaggtcaagaaccgtgttgaagaactggacaaaaagtattatgaagtgaagaac
aagaaagatgagctgcagagcgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggcactggcagccaaacgagaggacctggagaagaaacagcagctccttcgagccgcc
accggcaaggctatcctgaatggcattgacagcatcaacaaagtccttgagcattttcgt
cggaagggcatcaaccagcatgttatcaatggttaccacggcatcgtcatgaataacttt
gagtgtgagcctgccttttacacttgcgttgaggtgactgctggtaccagactgttctac
cacatagtggagacagacgaagtcagcaccaaaatactaatggagttcaacaaaatgaac
ctgccgggagaagtcacattcctgcccctaaccaagctggacgtcagggacactgcctac
ccagagaccaacgatgctatccccatgatcagcaagctgcgctacagcaccaactttgac
aaggccttcaagcacgtgtttggaaagaccctgatttgccgcagcatggaagtttccacc
cagctggccagagctttcaccatggattgtataactctggagggtgaccaggtgagccac
cgcggagctctgacaggaggctactacgataccagaaagtctcgtctggagctgcagaaa
gacatgagaaaggctgaagaggagctgggtgagctggaagccaagctcaatgagaacctg
cgcaggaacattgaacgcatcaacaatgaaatcgaccaactgatgaaccagatgcagcag
atcgagacacaacagaggaaatttaaggcctccagagacagcattctgtcagagatgaag
atgctgaaagagaagaggcagcagtcagagaagacgttcatgcccaagcaacgcagtctc
caaagtctggaggccagcctgcacgccatggagtccactagggagtcactgaaggccgag
ctgggaacagatctgctctcgcagctcagcctggaggaccagaggcgcgtcgatgacctc
aacgatgagattcgtcaactccagcaggacaacaggcagttgttgaatgagagaattaag
ctggagggcatcatgaccagagtggaaacatatctcaatgagaacttacggaagcgtctc
gaccaagtggaacaggagctgaatgagctgcgagagactgagggaggcacagtactgaca
gctacaacatctgaactggatggcatcaacaaacgtgtcaaagacactttggctcgatca
gaagatctggattctatgattgacaagacagagggagaaatcaaggaccacataaagagc
atggagcgctggaagaacattgagaaggagcaaaatgatgccatcaaccacgacaccaag
gagctggagaagatgaccaacaggcagggcatgctgctcaagaagaaggaagagtgcatg
aagaagatcagagagctgggctcgctgcctcaggaggcctttgagaagtaccagaccctc
acactcaaacagttgttccgaaaactggagcagtgcaacacagagctgaagaaatacagt
catgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaggaaaagctg
atcaagcgtcaggacgagttggaccgtggctacaaatctatcatggagctcatgaacgtc
ctggagctgcgcaagtacgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaagttttccaaaagctggtgccaggtggtaaagctacactggtgatgaagaagggt
gatgctgaaggcagccagtctcaggatgagggcgagagcggcgcagacagtgagaggggc
tccggttcacagagcagcgttccttcagttgatcagttcactggagtcggcatcagggtg
tcgttcacagggaagcaaggtgagatgagagagatgcagcagctgtctggaggtcagaag
tctctggtggctctggccctgatatttgccatccagaaatgcgaccccgctcccttctac
ctgtttgatgagatcgaccaggccctcgatgcccagcacaggaaggccgtctcagacatg
atcgtcgagctggcaggccacgcccagttcatcaccaccaccttcaggcctgagctgctc
gagtctgctgacaagttctacggtgtcaaattcagaaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaagactttgtggaggatgacaccacccatggttaa
DBGET
integrated database retrieval system
