Acanthopagrus latus (yellowfin seabream): 119021409
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Entry
119021409 CDS
T08233
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00260
Glycine, serine and threonine metabolism
alat00630
Glyoxylate and dicarboxylate metabolism
alat00670
One carbon pool by folate
alat01100
Metabolic pathways
alat01200
Carbon metabolism
alat01230
Biosynthesis of amino acids
alat01240
Biosynthesis of cofactors
alat04981
Folate transport and metabolism
Module
alat_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119021409 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119021409 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119021409 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119021409 (shmt2)
Enzymes [BR:
alat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119021409 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
119021409
NCBI-ProteinID:
XP_036957583
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Position
6:complement(11399390..11424729)
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AA seq
501 aa
AA seq
DB search
MLSFTLRQLARPLCHRAPIRLSVRGQQSHAATRVVDEDRPWTGQESLAQDDPEMWDLLTK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEMVDQIELLCQKR
ALEAFDLDPALWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNPATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYGRIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFDHADLVTSTTHKSLRGARAGLIFFRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKDYISQVLKNSKTMAA
ALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIA
DLRYRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctctccttcactctgagacaactcgcacggccactgtgccatcgagcaccaattcgt
ctcagcgtacgtggccagcagtcccacgctgccacccgtgtagtagatgaagatcgtcca
tggacaggccaggagagcctggctcaggacgaccctgagatgtgggatctgctgacaaag
gagaaggacaggcagtgccgcggcttggagctcatcgcatctgagaatttctgcagtcga
gcagctctggaagctcagggctcctgtctcaacaacaaatactctgaaggctacccaggg
aaaaggtactatggtggagcagaaatggtcgaccaaattgagctgctgtgtcagaaacga
gccctggaggcctttgacctggacccggctctgtggggtgttaacgtccagccatactct
ggctcccccgctaactttgccgtctacactgcagtactcaacccccatgaccgcatcatg
ggcctggacctgcccgatggaggacatctgacccatggctacatgtccgatgtgaagagg
atctcggcaacctcaatctattttgagtccatgccctacaagctgaatcctgcaacagga
ctcatagactacgaccagatggagatgacggccaagctgttccggcccaagctcatcatt
gctggcaccagtgcttatgcccgcctcattgactacggccgcatcaagaagctctgtact
gacattaaggcctacatgcttgctgacatggcccatatcagtggcctggtggcagccaaa
gccatcccctctccctttgatcatgctgacctggtcacctctaccacacacaaatccctc
agaggagccagggctggcctcatcttcttccgcaagggtgttcgctcagtggacaagaag
gggaaggagatcatgtacgatctcgaggacaaggtcaacttctctgtcttcccttcgctg
cagggtggacctcataaccacgccattgctggtgtggctgtggcactcagacaggcacag
tctcccatgttcaaggactacatctcccaggtactaaagaactcgaagaccatggctgca
gctctcctcagcaaaggctacacacttgtatcaggcgggaccgaaaaccacctggtcctg
gtggacctgaggcctaagggcatcgatggtgctcgggccgagagggtgctggagcttgtg
tcaattactgccaataagaacacctgccccggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccggccctgacctccagacagttcaaagaagctgactttgtgcag
gttgtcgagttcatggatgaaggcttcaagatcgccttggatgtcaagaaaaagacagga
aagctccaggacttcaagaacttccttctccaggatccagagaccgtggctcgcatcgcc
gatctgcgctaccgtgtcgaagctttcgccaggccattccctatgccgggcttccacgac
cattag
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