Acanthopagrus latus (yellowfin seabream): 119021466
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Entry
119021466 CDS
T08233
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119021466 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119021466 (usp48)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119021466 (usp48)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119021466 (usp48)
Ubiquitin system [BR:
alat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119021466 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119021466
NCBI-ProteinID:
XP_036957656
LinkDB
All DBs
Position
6:32888850..32918744
Genome browser
AA seq
1062 aa
AA seq
DB search
MLAQGIMAPRLQLEKAAWRWVETVKPEEIRQEHINLAYRINLPACKRGTCRRNCKGNPNC
LVGIGEQAWLGEIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELR
RSLYQCHNSRAQEHNIESDYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQ
QDAQEFSKLFLSLLEDTLSKQKNTNLQNVIQRQFCGQFSYVTVCNQCGRSSALPSRFYEL
ELNIQGHKNLTECVTEFLKEEKLDGENRYFCESCQSKQNATRRIKLHSLPPTLNLQLMRF
VFDRQTGHKKKLNTFISFPEQLDMGPFLEDQKCVYELSAVLIHRGISAYSGHYIAHVKDA
RTGDWYKFNDEEIEKMEGKKLQLGIEEDIAVALPSSSSWSVAETVKSQTRKPKCSKGYHC
SRNAYMLVYKVQEEESSDISRTNVEVPAFLQRLVDQDNHKFEEWCSEMADMRKQSVDKGK
AKHEEVKELYELLPAKDGEPYEFIPLEWLKKWLDDSTATKEIDNSLFLCSHGKLHPDKVA
ESKRVSLQAAQLLYERYSGGPRLDGSSLCRECVGQRCRVLRLKNQLNEDYKEVSNLVKRT
LSGEGYWVGKASLRSWRQLALDQLEEDEHETKHGNGQTNGQGPHTNNSKEFGPELSEGNE
DDMKTFNEDIVCCHEGLSILETERKLVSAEVWTKLRAYFPKAPEFTQNQEPCQQCLTLEQ
EEKDNEAVSKMMALDQKNQLLNLFHEKNRPTLTKWPQGTDVLYIVPLFFVDEWRKFIRRP
TKSSPVSNVGNTLLLCPHGGFMFTYDSLINGDAQHIALLWPNEWEVISRLFIVDQPISIH
CFKDTPPSGPTTQYTTQPDLCWECRESFLFQQQRDLREYTQATIYIRKVIEDKRMVKDAA
PEMNASSSEAEEEKEEHPKVDGERDPDFSQSEDGAKRLKLGDNSAASAATVTVTKPGGIR
RSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSLG
VIPESIICLKADEPIADYAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgcaagggattatggcgccccgcttacagctggagaaagcggcttggcgttgg
gtggaaacggtgaaaccagaagaaatcagacaggagcatatcaatttagcatatcgcatc
aatctcccggcctgcaagagaggaacctgcaggaggaactgcaaagggaatcccaactgt
cttgtgggtattggtgaacaggcgtggcttggggagattgatgaaaatgctttccacaat
attgatgacccaaattcagaacgtcgagacaagaacacatttgttggcctgactaacctg
ggtgcaacatgttacgtcaacacattcctgcaagtgtggttccacaacctggagctacgt
aggagcctgtatcagtgccacaattcccgagcacaggaacacaatattgagtctgattat
gagcctcagtccatctgtgagcatctgcagtatctgtttgcactcctgcagaacagcaac
agaaagtacatagatccttcagggctggtcaaagcactgggcctggacacaggacagcag
caggatgcccaggagttttcaaagctgttcttgtctctattggaagacactctgtccaag
cagaagaacaccaacctgcagaatgtcatccagcggcagttctgtggacagttctcctac
gttactgtctgtaaccagtgtggacgatcatctgcactgccgtccagattctatgagctg
gagctgaacatccagggccacaagaacctgaccgagtgtgtcacagagttcctgaaggag
gagaagctggatggggagaaccgctacttctgtgagagctgtcagagtaaacagaacgcc
acccgaaggatcaaactgcatagccttcctccaaccctcaacctgcagctcatgcgcttt
gtctttgataggcaaacaggccataagaagaagctcaacacctttatcagttttccagag
cagctggacatggggcctttcttggaagaccagaagtgtgtttatgaactgagtgcggtg
ctgattcatcggggcatcagtgcctactcgggccattacatcgcccatgtaaaggacgct
cgtactggtgactggtacaaattcaatgatgaggaaatagagaagatggaaggcaagaag
ctgcagcttggtattgaggaggacattgctgttgctctaccgtcttcgtcttcttggtct
gtagccgagacagtgaaatcacagacacgaaagccaaaatgcagtaaaggataccactgc
tcccgaaatgcctacatgctggtgtataaggtccaggaagaggagagctcagatatctcc
aggaccaatgtcgaggtgccagcctttcttcagaggttggttgaccaagacaaccataaa
tttgaggagtggtgcagtgagatggctgacatgagaaaacagagtgtggataagggcaaa
gccaagcatgaggaggtgaaggagctctacgagcttttacccgcaaaagacggtgagcca
tatgagttcatccccctggagtggttgaagaagtggctggatgattccactgccacaaaa
gaaattgataactccctcttcttgtgttctcatggcaaactgcacccagacaaggtggca
gagtctaagagggtttccctccaagctgctcagctcctctatgagcgctacagtggaggg
ccaagactagacggctcctcactgtgtagggagtgtgttggccagcgatgtagggttcta
cggctgaagaaccagctcaatgaagactacaaagaagtctccaacctggtcaaacgcaca
ctcagtggtgagggctactgggttggtaaagcatcactgcgtagctggaggcagttagct
ttggaccagctggaggaggacgaacatgaaaccaaacacggtaatggccagaccaatgga
cagggaccacacacaaacaacagcaaagagttcggtccagagctctcagagggcaacgag
gacgacatgaagactttcaatgaagatattgtctgctgtcatgagggtctgagtattctt
gagactgaacgaaaactggtatcagctgaagtttggaccaagctaagggcatacttcccc
aaagcacccgaattcacccaaaaccaagagccgtgtcagcagtgcctgacattggagcag
gaagaaaaggacaatgaggcggtcagtaagatgatggccctggaccagaagaatcaactg
ctcaacctcttccatgagaagaaccggccaacgctcactaagtggcctcagggcacagat
gtactttacatagtccctcttttctttgtggatgagtggagaaaattcatcaggaggccc
actaaatcttctccagtgtcgaatgtgggcaatactttgctgctctgtccacatggaggc
ttcatgttcacctacgactccctgatcaatggagatgcacaacatatagctctgctctgg
cctaacgaatgggaggtaatcagccgactcttcatcgtagaccagcctatctccatccac
tgcttcaaagacaccccgcccagtggccccaccactcagtacacaactcagcctgatctg
tgttgggagtgcagagagagcttccttttccagcagcagagggaccttcgagagtatacc
caagcaaccatctacatccgcaaagtcatcgaagacaagaggatggtaaaggatgcagct
ccggaaatgaatgccagcagctctgaagcagaagaggagaaggaagaacatccgaaggtg
gatggagagagagacccagacttcagccagtcagaagatggtgccaagcggcttaagttg
ggtgacaacagtgcagcatcagcagcgactgttactgtgaccaaaccaggtggaattagg
agaagcacccggcacaggaaactccgaggggaaaaagcactcatcgtttcagccaatcag
acccttaaagagttgaaaatacagatcatgcacgccttctctgtcgctccatttgaccag
aatctctccattgatggaaaaagtctgacagatgactcagccacactgggcagtctgggt
gtcatcccagaaagcatcatctgtctaaaggctgacgagccaatagcagactatgctgca
atggatgatgtctatcaggtgagaatgcctgaagagggattcaaaggcaccgggcttcta
gggcactga
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integrated database retrieval system
