Acanthopagrus latus (yellowfin seabream): 119021538
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Entry
119021538 CDS
T08233
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119021538 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119021538 (irf6)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119021538 (irf6)
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119021538 (irf6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119021538
NCBI-ProteinID:
XP_036957788
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Position
6:complement(17114058..17119688)
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AA seq
492 aa
AA seq
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MSVTPRRVRLKPWLVAQVDSGRYPGLVWLDREQMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCDIPQPL
SNQASSDAGSWTPHDEEGIEEDVPDTPESLPPYPSNGTSPSPMIMWSPMGSDSSIQPPSC
PPSNEVWPKEEPVKIWPKEEPVDVEMHTTTLADMPPAPLPDHSMQPPPLPDALFASPETW
ISSLPMTDLEVTFLYRGKEMCPTANVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFP
TTEHISNDKQRVFTSRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLI
ERQRKVKLFCLESFLSGVIAYQRGQTPSPPQFEISLCFGEEWPDGRPRERKLIMVQVIPV
VARMITEMFSGDNTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWALPPG
PGLNIVQALQGQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaacccctcggcgtgtccgcctgaagccctggctggtcgctcaggtggacagc
gggcgatacccgggtctggtgtggctggaccgggagcaaatgcgcttcaggattccatgg
aaacacgccacacgtcacacaccccagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagacggggaagttccaagagggagttgatgaacctgatcctgcaaagtggaaa
gctcagctccgatgtgccctgaacaaaagccgagaattcaacctggtgtacgacggcacc
aaagaggtccccatgaatcctttgaagatatatgacgtctgcgacatcccgcagccgctc
agtaaccaagcttcttcagatgctggctcttggactccgcatgatgaagaaggtattgag
gaagatgtcccagatacaccagagtctctccctccatacccctccaatggcaccagcccc
tctcctatgatcatgtggtctcccatgggctcagactcctctattcagccccccagctgc
cccccatcaaacgaggtctggcccaaagaggagcctgttaagatctggcccaaagaggag
cctgtggatgtggagatgcacaccacaaccctggctgacatgccccctgctccgctgccc
gatcactcaatgcagccgcctcctctacctgacgccctgtttgcctctccggagacgtgg
atcagttccctcccgatgacagacctggaggtgacgttcctgtacagagggaaagagatg
tgtcccacggccaacgtcagtaaccctcagggctgcaggctgttctacggagacctcggc
cccatggtgaaccaggaggagctgttcggcccggtgaacctggagcagctgcgcttcccg
accacagagcacatctccaacgacaagcagagggtcttcaccagccgcctgctggatgtg
atggacagaggcttgatcctggaggtcagcggccacgacatctatgcagtccgtctctgc
cagtgtaaggtgtactggtcgggcccctgtgctccaaatccagcagcgccaaatcttata
gagcgccagaggaaggtcaaactgttttgtctggagtcttttctcagtggggtgatagcc
taccagcgtggtcagacaccatccccccctcagtttgaaatcagcttgtgttttggagag
gagtggcctgatgggaggccccgggagaggaaactcatcatggtacaggtcattccagta
gtggcccgcatgatcaccgagatgttttccggagacaacacgcgatccttcgacagcggc
agcgttcgcctgcagatttcaatcccggacatcaaagacaacatagtgacccacctaaag
cagctgtactgcctgctacagacccaccagggccaggacggctgggcactgccgcccggc
ccgggcctgaacatcgtccaggctctacagggacagtga
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