Acanthopagrus latus (yellowfin seabream): 119021551
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Entry
119021551 CDS
T08233
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119021551 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119021551 (smarcd1)
03036 Chromosome and associated proteins [BR:
alat03036
]
119021551 (smarcd1)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119021551 (smarcd1)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119021551 (smarcd1)
PBAF complex
119021551 (smarcd1)
GBAF(ncBAF) complex
119021551 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
119021551
NCBI-ProteinID:
XP_036957801
LinkDB
All DBs
Position
6:complement(9651793..9667934)
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGGFQTAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMNPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQANRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagactgctccgacgggaggtggtggcggagcaatggga
cctggaccgccggtgccgggcgcgggaccaggcatgggccccgggactccttctggaagg
atgggaccgtcgtcggccgcgcagaaccacatgtatcgctccccgatgcccgggcctggg
tacccgagaccaggcatgcctccttcaagccgcatgaacccacaggggccagccatgggc
cctccaggatatggaaacagcccagtgtctcgccctgtgatgcctggtgtgatggacccg
tctcgcaagaggcccgccccccaacagattcaacaggtgcagcaggcgaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagcggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggcttttgagaggaagctggaccagaccatc
atgcgcaagaggctggacattcaggaggccctcaagaggcccattaagcaaaagagaaaa
ctgcggatcttcatatcaaacaccttcaacccggcaaagccagatgctgaggatggagaa
ggcacagttgcatcatgggagctgcgtgtcgaggggcgtctgctggaagatacggccgtg
tccaagtatgaagccaccaaacagaagcggaagttctcttctttcttcaagtctctggtg
atcgagttggacaaagacctgtacggtccagataatcaccttgtggagtggcacaggact
gccaccacccaggaaacggatggtttccaggtgaagaggcccggtgatgtgggtgttcgc
tgcaccgtcctgctcatgctggactaccagccccctcagttcaagctggacccccggctt
gctcgtatgcttggtatccacacccagaccagacctgtcatcattcaggccctgtggcag
tacgtcaagacccacaaactccaagaccctcatgagcgcgagttcatcaactgtgacaaa
tatctgcagcagatctttgagactcagcgaatgaagttctctgagatcccgcagcgcctg
catgcacttctgatgcctccggagcccatcatcatcaaccatgtgatcagtgtggaccct
aacgaccaaaagaagactgcctgctatgacattgacgtggaggtggatgacacactgaag
acccagatgaactccttcctgctctcaacagccagtcagcaggaaattgcaggactggac
aataagatccatgaaaccattgagaccatcaaccagctgaagacccagagggagttcatg
ttgagttttgccagagatcctcagggctttatcaacgactggctgcagtcccagtgcaga
gacctcaagacaatgacagatgtggtaggaaacccagaggaagagcgaagagcagagttt
tactaccagccgtgggctcaggaggctgtctgtcgctacttctactccaaggtccagcag
aggcgacaggagctggagcaggcgctcggcatcagaaacacctaa
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