Acanthopagrus latus (yellowfin seabream): 119021561
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Entry
119021561 CDS
T08233
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04260
Cardiac muscle contraction
alat04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119021561
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119021561
04261 Adrenergic signaling in cardiomyocytes
119021561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119021561
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119021561
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
WAK_assoc
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
119021561
NCBI-ProteinID:
XP_036957810
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Position
6:16416888..16454488
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AA seq
1160 aa
AA seq
DB search
MLGDWRILFSHVCSTSLLLLWTLAGLNVVEVTGSQPGIPLSVVKLWASAFGGEIKSISAK
YSGSQLLQKELWAITAPRPGTNSSSETSTPIKVNSRLNPKTTAACLWEESGGARSPRKHG
ESVQTAIKRRLQAPGPACTEKYKEFEKSVRVEEIDGVKLVKNLAVKMEEVFRKKAEATRR
LVEAAEEAHHQHEENPDLQYEYFNAVLINEVDEQGNNVELGGQFLLEPNDHFNNLSVNLS
LSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQYPGVK
WHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGD
DDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEALAEAFTI
LSDFNQTGRGSVCSQAIMLVTDGATAMYDDVFEKYNWPERKVRIFPYLIGRESAFADNLK
WMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQAYKMK
EKAGPALMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYAFAIT
NNGYILTHPDLRPLYQDGQKRRKPNYSSVDLSEVEWEDKDDALRNAMVNRRTGTFSMEVK
KTVDRGRRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQPDVA
LADEWTYCNTEEQHEHRHLTQIQAIKLFMTGRRPHLKCDRELIQEVLFDAVVTAPLEAYW
TGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNRDFLTAEDKEGVFNADHFPL
WYKRAAEQVPGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQR
KFWTACRQCTALDGKCSISCDNEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGAVMNKL
LQMGSFKRITLYDYQALCKEYAGSSDSARTLSDPFTVVKWLLTELVIFLLEFNLYSWWNI
DLSVKAQRSRGKHMMVPCDTEYPAFVSERTIKETTGNIDCEGCFRSFVIQQIPSSNLFMV
VVDNKCDCSSAPPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECGSAT
RLTSALTAALLPLIAATISR
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgttgggggactggaggatcctgttctcgcacgtgtgcagcaccagcctcctgctgctc
tggaccctcgccggcctgaatgtggtggaggtgacggggtctcagccagggatccctctg
tcagtcgtgaagctctgggcctctgcattcggtggtgaaatcaaatccatctctgcaaaa
tattctggatcccaactactgcagaaggagctgtgggctatcacagcaccgcgtccaggg
accaactccagttctgagaccagcactccaatcaaggtcaatagcaggctcaatcctaaa
actacggctgcgtgtctgtgggaggaaagcggaggagccagaagtccacgcaaacatggg
gaaagcgttcaaactgcaatcaagaggcgcctccaggctccggggcctgcctgcaccgag
aaatataaagaatttgaaaagtcagtcagagtggaagaaattgatggcgtgaaactggtg
aaaaaccttgcggtgaagatggaggaagtcttccggaaaaaagcagaggctaccaggcgg
ctggtagaggcggcggaagaagcgcaccatcagcacgaagagaaccccgacctgcagtat
gagtacttcaacgctgtgctgatcaatgaagtggacgagcagggcaataacgtggagctg
ggggggcagttcctcctggagcccaacgaccatttcaataacctgtccgtcaacctgagc
ctcagcgtggtgcaggtgcccaccaacatgtacaacaaagatcctgacatagtgaacgga
gtctactggtcagaggctctcaataaagtgtttgtggataatttcgaacgagatccaacg
ctgatctggcagtactttgggagcgccaagggtttcttcaggcagtaccctggagtgaag
tggcacccagacgaacatggtgtcatcggctttgactgtagaaacaggaagtggtacatt
caggcagcgacgtctccgaaggatgttgtaatcttagtggatgtcagtggaagcatgaag
ggactgaggctgaccatcgccaggcagactgtctcctccatattagacacgcttggcgat
gacgacttcttcaacatcatcgcatataaccaggagatccactacgtggagccttgtttg
aatggcacgctggtccgagccgacagaaccaacaaagatcatttccgcgaacatctggac
aagctgtttgccaaagggatcgggctgctgggtgaagcgctggctgaagcgttcacaatc
ctgagtgattttaaccaaactggacgcggcagcgtgtgcagccaggccataatgctggtg
accgacggggcgactgcaatgtatgacgacgtctttgaaaagtacaactggcccgaaaga
aaggtgcggatattcccttacctgattggacgagagtccgcatttgctgataacctcaaa
tggatggcctgtgccaacaaaggatacttcagtcagatctccaccttagcagacgttcag
gagaacgtgatgaggtatctccacgtcatgagccgcccaaaggtcattgatcacgagcac
gacacggtgtggactgaagcctacgtggacagtgctctttcgcaggcttataagatgaag
gagaaagccggcccagctctgatgaccacagttgccatgcctgtgttcagcacaaagaat
gaaacgaagaaccagggtattctgttgggggtcgtaggaacagacatccctctgcaggag
ctgatgaagctcatccctaaacatatgttagggatccatgggtacgcgttcgctatcacg
aacaacggctacatcctgacgcacccggacctcagacccttgtatcaggacggtcagaag
aggaggaagcccaactacagcagcgtggatctctcagaggtggagtgggaagacaaagat
gatgccctacgtaacgctatggtgaacagaaggacaggcactttctccatggaggtgaag
aagactgtggatagagggagacgtgtcctgaagatgcacaatgactattactacactgac
attaaagggacaccattcagtgtcggagtggctctctccagaggtcatggaaagtacttc
ttccgaggaaatgtgtcagttgaagctgggctccgtgatctggaacagccagatgtcgcc
ctagcagatgaatggacttactgcaacacagaggagcagcacgagcaccgtcacctgacc
cagattcaagccatcaagctcttcatgacgggccgcagaccacacctcaaatgtgacaga
gagctgatccaggaggtgttatttgatgcagtggtcacagctccactggaggcctactgg
accggactcgccctcaacaagtcagagaactcagacaaaggagtggagattgccttcctg
ggcacacgcaccggcctgtcgagaaccaacctgtttgtgcccgccgatcagctctccaat
cgagacttcctgacagcggaggacaaggagggtgtgtttaatgctgatcacttccctctg
tggtacaagagagcggcagagcaggtccctggcacatttgtctactccatccccttcagc
acagctttagagaataagagcgtggtcttggccagcactgcaattcagctcctcgatgac
agaaagtctccaattgttgcagctgtcgggatccagatgaagctcgagttcttccagagg
aagttctggaccgcctgcagacagtgtacagccctggatggaaaatgtagcattagctgt
gataacgaggacattaactgttatctcattgacaacaacggcttcattctcgtcacagag
gagcaatctcagacagggctcttctttggagaggtggagggtgctgttatgaacaaactt
ctacaaatggggtccttcaaaaggatcacgctgtatgattaccaggccctttgcaaagag
tatgctgggagcagcgacagtgcacgcactttatcagatcccttcactgttgtgaaatgg
ctcctgaccgaacttgtcatttttctgctagaatttaacctttacagctggtggaatatc
gacctttctgttaaagctcagagatctcggggtaaacatatgatggtgccatgtgataca
gaataccctgcctttgtctccgaacgcaccatcaaagaaacgacaggcaacatcgactgt
gagggctgtttcagatcttttgtcatacagcagattcccagtagcaacctcttcatggtg
gtcgtggacaataagtgtgactgcagcagtgcccctccagtaacaatggatcctatcgag
atcatgtacaacgagtcacttaaatgtgacagactgaagtttcagaaggacaggaagaag
cctgaatcgtgtcatcctttccaccctgaggaaaatgccatggagtgtggttcagcaaca
cgcctcaccagcgctctgacagcagctctgctccctctgatagcagcgaccatcagcagg
tga
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